RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 FAM223AQ8IWN6 122 aa7.07□□□□□ -1.28
SMC1B-202ENST00000404354 NAV2Q8IVL1 2488 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 HERV-K104P63124 156 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 FN1P02751 2386 aaKnown RBP7.06□□□□□ -1.28
SMC1B-202ENST00000404354 KLLNB2CW77 178 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 H7C423 109 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 RS1O15537 224 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 EPG5Q9HCE0 2579 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 SYNJ2BPP57105 145 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 CCDC168Q8NDH2 2452 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
SMC1B-202ENST00000404354 M0R2P5 195 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 FAM19A4Q96LR4 140 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 I3L3M4 83 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 K7ENP7 123 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 RPL13AP40429 203 aaKnown RBP7.05□□□□□ -1.28
SMC1B-202ENST00000404354 LY6DQ14210 128 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 SHISA2Q6UWI4 295 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 ABCA12Q86UK0 2595 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 ID1P41134 155 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 MEIG1Q5JSS6 88 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 DCANP1Q8TF63 244 aa7.05□□□□□ -1.28
SMC1B-202ENST00000404354 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.04□□□□□ -1.28
SMC1B-202ENST00000404354 IGHV4-61A0A0C4DH41 118 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 TRBV10-2A0A0K0K1G8 114 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 POM121L12Q8N7R1 296 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 MAPK1IP1LQ8NDC0 245 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 IGHV1OR15-1A0A075B7D0 117 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 LGALS9O00182 355 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 NDUFA7O95182 113 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 IGHV1-69P01742 117 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 Q6ZSN1 163 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 NIPBLQ6KC79 2804 aaeCLIP7.04□□□□□ -1.28
SMC1B-202ENST00000404354 ZFYVE26Q68DK2 2539 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 CHD6Q8TD26 2715 aa7.04□□□□□ -1.28
SMC1B-202ENST00000404354 A0A0B4J2C4 111 aa7.03□□□□□ -1.28
SMC1B-202ENST00000404354 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
SMC1B-202ENST00000404354 C19orf84I3L1E1 186 aa7.03□□□□□ -1.28
SMC1B-202ENST00000404354 COX6CP09669 75 aa7.03□□□□□ -1.28
SMC1B-202ENST00000404354 TNFRSF18Q9Y5U5 241 aa7.03□□□□□ -1.28
SMC1B-202ENST00000404354 MXRA5Q9NR99 2828 aa7.03□□□□□ -1.28
SMC1B-202ENST00000404354 MED14OSP0DP75 135 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 CDKN2A-AS1Q9UH64 79 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 TRGV11A0A075B6L2 103 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 NXPH4O95158 308 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 RBMY1A1P0DJD3 496 aaKnown RBP7.02□□□□□ -1.29
SMC1B-202ENST00000404354 RBMY1CP0DJD4 496 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 RBMY1FQ15415 496 aaKnown RBP7.02□□□□□ -1.29
SMC1B-202ENST00000404354 DEFB136Q30KP8 78 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 FBXL19-AS1Q494R0 122 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 LITAFQ99732 161 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 LRRK2Q5S007 2527 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
SMC1B-202ENST00000404354 SNRPD3P62318 126 aaKnown RBP7.01□□□□□ -1.29
SMC1B-202ENST00000404354 DGAT2L7PQ6IED9 249 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 NF1P21359 2839 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 A0A0J9YX75 114 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 HOXD3P31249 432 aaPredicted RBP7.01□□□□□ -1.29
SMC1B-202ENST00000404354 RPL32P62910 135 aaKnown RBP7.01□□□□□ -1.29
SMC1B-202ENST00000404354 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 IGKV3OR2-268A0A0C4DH90 116 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 AVPP01185 164 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 NSUN5P1Q3KNT7 163 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 C19orf54Q5BKX5 351 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 NRGNQ92686 78 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 USMG5Q96IX5 58 aa7.01□□□□□ -1.29
SMC1B-202ENST00000404354 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 TRBV30A0A0K0K1B3 111 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 IGHG2P01859 326 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 APRG1Q8IVJ8 170 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 FAM104AQ969W3 186 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 LINC00467Q9BRT7 94 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 TRAV13-1A0A0B4J241 112 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 IGHV1-58A0A0C4DH39 117 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 RHOHQ15669 191 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7□□□□□ -1.29
SMC1B-202ENST00000404354 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 IGHV3-53P01767 116 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 IGHV4-59P01825 116 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 CFHR3Q02985 330 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 Q8N2B8 174 aa7□□□□□ -1.29
SMC1B-202ENST00000404354 DEFB131AP59861 70 aa6.99□□□□□ -1.29
SMC1B-202ENST00000404354 COX6A2Q02221 97 aa6.99□□□□□ -1.29
SMC1B-202ENST00000404354 VSIG2Q96IQ7 327 aa6.99□□□□□ -1.29
SMC1B-202ENST00000404354 Q9H8V8 135 aa6.99□□□□□ -1.29
SMC1B-202ENST00000404354 KHDC1LQ5JSQ8 128 aa6.99□□□□□ -1.29
SMC1B-202ENST00000404354 MIAQ16674 131 aa6.98□□□□□ -1.29
SMC1B-202ENST00000404354 TMEM61Q8N0U2 210 aa6.98□□□□□ -1.29
SMC1B-202ENST00000404354 Q9HAA7 133 aa6.98□□□□□ -1.29
SMC1B-202ENST00000404354 C18orf65Q6ZTR6 163 aa6.98□□□□□ -1.29
SMC1B-202ENST00000404354 CFAP46Q8IYW2 2715 aa6.97□□□□□ -1.29
SMC1B-202ENST00000404354 TEX15Q9BXT5 2789 aa6.97□□□□□ -1.29
SMC1B-202ENST00000404354 IGHV4-30-2A0A087WSY4 118 aa6.97□□□□□ -1.29
SMC1B-202ENST00000404354 KLK5Q9Y337 293 aaPredicted RBP6.97□□□□□ -1.29
SMC1B-202ENST00000404354 ANKRD17O75179 2603 aaKnown RBP6.97□□□□□ -1.29
SMC1B-202ENST00000404354 MRPS36P82909 103 aaKnown RBP6.97□□□□□ -1.29
SMC1B-202ENST00000404354 KLRB1Q12918 225 aa6.97□□□□□ -1.29
SMC1B-202ENST00000404354 PIK3CD-AS1Q5SR53 167 aa6.97□□□□□ -1.29
SMC1B-202ENST00000404354 LST1O00453 97 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms