RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 C4orf3Q8WVX3 66 aa12.95□□□□□ -0.34
CDK11A-208ENST00000404249 Q9UF83 564 aa12.95□□□□□ -0.34
CDK11A-208ENST00000404249 A0A0J9YXY3 114 aa12.94□□□□□ -0.34
CDK11A-208ENST00000404249 RNASE13Q5GAN3 156 aaKnown RBP12.94□□□□□ -0.34
CDK11A-208ENST00000404249 KHDC1LQ5JSQ8 128 aa12.94□□□□□ -0.34
CDK11A-208ENST00000404249 DYNLRB2Q8TF09 96 aa12.94□□□□□ -0.34
CDK11A-208ENST00000404249 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
CDK11A-208ENST00000404249 PTH2Q96A98 100 aa12.94□□□□□ -0.34
CDK11A-208ENST00000404249 A0A0B4J2C4 111 aa12.94□□□□□ -0.34
CDK11A-208ENST00000404249 SCGB1C2P0DMR2 95 aa12.94□□□□□ -0.34
CDK11A-208ENST00000404249 CHCHD7Q9BUK0 85 aa12.94□□□□□ -0.34
CDK11A-208ENST00000404249 MYO18BQ8IUG5 2567 aa12.94□□□□□ -0.34
CDK11A-208ENST00000404249 PRRC2AP48634 2157 aaKnown RBP12.94□□□□□ -0.34
CDK11A-208ENST00000404249 IGHV3-33P01772 117 aa12.93□□□□□ -0.34
CDK11A-208ENST00000404249 PRB1P04280 392 aa12.93□□□□□ -0.34
CDK11A-208ENST00000404249 C11orf72Q8NBR9 251 aa12.93□□□□□ -0.34
CDK11A-208ENST00000404249 RAX2Q96IS3 184 aa12.93□□□□□ -0.34
CDK11A-208ENST00000404249 LINC01587Q99440 93 aa12.93□□□□□ -0.34
CDK11A-208ENST00000404249 POLQO75417 2590 aa12.93□□□□□ -0.34
CDK11A-208ENST00000404249 TRAV8-3A0A0A6YYJ7 113 aa12.92□□□□□ -0.34
CDK11A-208ENST00000404249 SPANXA1Q9NS26 97 aa12.92□□□□□ -0.34
CDK11A-208ENST00000404249 UBE2D4Q9Y2X8 147 aa12.92□□□□□ -0.34
CDK11A-208ENST00000404249 ADARB2-AS1A8MUL3 147 aa12.92□□□□□ -0.34
CDK11A-208ENST00000404249 KRTAP10-9P60411 292 aa12.92□□□□□ -0.34
CDK11A-208ENST00000404249 SBSPONQ8IVN8 264 aa12.92□□□□□ -0.34
CDK11A-208ENST00000404249 LINC00467Q9BRT7 94 aa12.92□□□□□ -0.34
CDK11A-208ENST00000404249 TEN1Q86WV5 123 aa12.91□□□□□ -0.34
CDK11A-208ENST00000404249 CREBBPQ92793 2442 aa12.91□□□□□ -0.34
CDK11A-208ENST00000404249 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.91□□□□□ -0.34
CDK11A-208ENST00000404249 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.91□□□□□ -0.34
CDK11A-208ENST00000404249 IGHV1-58A0A0C4DH39 117 aa12.91□□□□□ -0.34
CDK11A-208ENST00000404249 IGKV2-29A2NJV5 120 aaPredicted RBP12.91□□□□□ -0.34
CDK11A-208ENST00000404249 INSP01308 110 aa12.91□□□□□ -0.34
CDK11A-208ENST00000404249 ERG28Q9UKR5 140 aa12.91□□□□□ -0.34
CDK11A-208ENST00000404249 TINCRA0A1B0GVN0 87 aa12.9□□□□□ -0.34
CDK11A-208ENST00000404249 PPDPFLQ8WWR9 84 aa12.9□□□□□ -0.34
CDK11A-208ENST00000404249 ACACBO00763 2458 aa12.9□□□□□ -0.34
CDK11A-208ENST00000404249 MXRA5Q9NR99 2828 aa12.9□□□□□ -0.34
CDK11A-208ENST00000404249 IGHV3-53P01767 116 aa12.9□□□□□ -0.34
CDK11A-208ENST00000404249 DEFB114Q30KQ6 69 aa12.9□□□□□ -0.34
CDK11A-208ENST00000404249 LITAFQ99732 161 aa12.9□□□□□ -0.34
CDK11A-208ENST00000404249 H7C2G1 150 aa12.89□□□□□ -0.35
CDK11A-208ENST00000404249 HIST2H2BDQ6DRA6 164 aa12.89□□□□□ -0.35
CDK11A-208ENST00000404249 Q6ZUT4 128 aa12.89□□□□□ -0.35
CDK11A-208ENST00000404249 DNAJC30Q96LL9 226 aa12.89□□□□□ -0.35
CDK11A-208ENST00000404249 IGHV3-38A0A0C4DH36 116 aa12.89□□□□□ -0.35
CDK11A-208ENST00000404249 DEFB113Q30KQ7 82 aa12.89□□□□□ -0.35
CDK11A-208ENST00000404249 BEAN1Q3B7T3 259 aa12.89□□□□□ -0.35
CDK11A-208ENST00000404249 CARD19Q96LW7 228 aa12.89□□□□□ -0.35
CDK11A-208ENST00000404249 NDUFA12Q9UI09 145 aa12.88□□□□□ -0.35
CDK11A-208ENST00000404249 RS1O15537 224 aa12.88□□□□□ -0.35
CDK11A-208ENST00000404249 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
CDK11A-208ENST00000404249 SPINK8P0C7L1 97 aa12.87□□□□□ -0.35
CDK11A-208ENST00000404249 Q1RN00 199 aa12.87□□□□□ -0.35
CDK11A-208ENST00000404249 FAM208BQ5VWN6 2430 aa12.87□□□□□ -0.35
CDK11A-208ENST00000404249 ANKRD29Q8N6D5 301 aa12.87□□□□□ -0.35
CDK11A-208ENST00000404249 Q96MF0 132 aa12.87□□□□□ -0.35
CDK11A-208ENST00000404249 CDIP1Q9H305 208 aa12.87□□□□□ -0.35
CDK11A-208ENST00000404249 SPANXDQ9BXN6 97 aa12.86□□□□□ -0.35
CDK11A-208ENST00000404249 SPANXCQ9NY87 97 aa12.86□□□□□ -0.35
CDK11A-208ENST00000404249 FHL3Q13643 280 aa12.86□□□□□ -0.35
CDK11A-208ENST00000404249 A8MZ25 164 aa12.84□□□□□ -0.35
CDK11A-208ENST00000404249 SLC25A20O43772 301 aa12.84□□□□□ -0.35
CDK11A-208ENST00000404249 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
CDK11A-208ENST00000404249 XCL2Q9UBD3 114 aa12.84□□□□□ -0.35
CDK11A-208ENST00000404249 C9JAW5 83 aa12.84□□□□□ -0.35
CDK11A-208ENST00000404249 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
CDK11A-208ENST00000404249 ADAMTSL4-AS1Q5T5F5 129 aa12.84□□□□□ -0.35
CDK11A-208ENST00000404249 GEMIN7Q9H840 131 aaKnown RBP12.84□□□□□ -0.35
CDK11A-208ENST00000404249 PRSS2P07478 247 aa12.83□□□□□ -0.35
CDK11A-208ENST00000404249 BBC3Q96PG8 261 aaPredicted RBP12.83□□□□□ -0.35
CDK11A-208ENST00000404249 MIAQ16674 131 aa12.83□□□□□ -0.36
CDK11A-208ENST00000404249 CLUHP3Q96NS8 147 aa12.83□□□□□ -0.36
CDK11A-208ENST00000404249 M0QXV9 152 aa12.82□□□□□ -0.36
CDK11A-208ENST00000404249 ZFAND6Q6FIF0 208 aa12.82□□□□□ -0.36
CDK11A-208ENST00000404249 Q6ZSV7 163 aa12.82□□□□□ -0.36
CDK11A-208ENST00000404249 ATXN8Q156A1 80 aa12.81□□□□□ -0.36
CDK11A-208ENST00000404249 ZNF462Q96JM2 2506 aa12.81□□□□□ -0.36
CDK11A-208ENST00000404249 PTPN13Q12923 2485 aa12.81□□□□□ -0.36
CDK11A-208ENST00000404249 IGHV3OR16-12A0A075B7B8 117 aa12.81□□□□□ -0.36
CDK11A-208ENST00000404249 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
CDK11A-208ENST00000404249 STHQ8IWL8 128 aa12.81□□□□□ -0.36
CDK11A-208ENST00000404249 CDKN2A-AS1Q9UH64 79 aa12.81□□□□□ -0.36
CDK11A-208ENST00000404249 TRIAP1O43715 76 aa12.8□□□□□ -0.36
CDK11A-208ENST00000404249 TMEM86BQ8N661 226 aa12.8□□□□□ -0.36
CDK11A-208ENST00000404249 IL17DQ8TAD2 202 aa12.8□□□□□ -0.36
CDK11A-208ENST00000404249 LRRK2Q5S007 2527 aa12.8□□□□□ -0.36
CDK11A-208ENST00000404249 TEX15Q9BXT5 2789 aa12.8□□□□□ -0.36
CDK11A-208ENST00000404249 IGLV5-45A0A087WSX0 123 aa12.8□□□□□ -0.36
CDK11A-208ENST00000404249 TIRAPP58753 221 aa12.8□□□□□ -0.36
CDK11A-208ENST00000404249 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
CDK11A-208ENST00000404249 CENPEQ02224 2701 aa12.79□□□□□ -0.36
CDK11A-208ENST00000404249 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
CDK11A-208ENST00000404249 NPC2P61916 151 aa12.79□□□□□ -0.36
CDK11A-208ENST00000404249 DGAT2L7PQ6IED9 249 aa12.79□□□□□ -0.36
CDK11A-208ENST00000404249 KRTAP1-3Q8IUG1 177 aa12.79□□□□□ -0.36
CDK11A-208ENST00000404249 TRGV1A0A0A0MS02 117 aa12.79□□□□□ -0.36
CDK11A-208ENST00000404249 LINC01620Q4KN68 170 aa12.79□□□□□ -0.36
CDK11A-208ENST00000404249 TIMM17BO60830 172 aa12.78□□□□□ -0.36
CDK11A-208ENST00000404249 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms