RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 SLURP1P55000 103 aa8.82□□□□□ -1
RBM39-206ENST00000403542 DEFB131AP59861 70 aa8.82□□□□□ -1
RBM39-206ENST00000403542 DAND5Q8N907 189 aa8.82□□□□□ -1
RBM39-206ENST00000403542 C20orf203Q8NBC4 194 aa8.82□□□□□ -1
RBM39-206ENST00000403542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.81□□□□□ -1
RBM39-206ENST00000403542 A0A0U1RRA0 63 aa8.81□□□□□ -1
RBM39-206ENST00000403542 IGKV2-29A2NJV5 120 aaPredicted RBP8.81□□□□□ -1
RBM39-206ENST00000403542 RHODO00212 210 aa8.81□□□□□ -1
RBM39-206ENST00000403542 FN1P02751 2386 aaKnown RBP8.81□□□□□ -1
RBM39-206ENST00000403542 NBPF19A0A087WUL8 3843 aa8.81□□□□□ -1
RBM39-206ENST00000403542 TMEM223A0PJW6 202 aa8.81□□□□□ -1
RBM39-206ENST00000403542 A8MWV9 139 aa8.81□□□□□ -1
RBM39-206ENST00000403542 I3L3M4 83 aa8.81□□□□□ -1
RBM39-206ENST00000403542 K7EQG2 157 aa8.81□□□□□ -1
RBM39-206ENST00000403542 CKS1BP61024 79 aa8.81□□□□□ -1
RBM39-206ENST00000403542 IGHV3OR16-12A0A075B7B8 117 aa8.8□□□□□ -1
RBM39-206ENST00000403542 B4DSR2 109 aa8.8□□□□□ -1
RBM39-206ENST00000403542 Q6ZSN1 163 aa8.8□□□□□ -1
RBM39-206ENST00000403542 K7EMT4 169 aa8.8□□□□□ -1
RBM39-206ENST00000403542 TCTEX1D4Q5JR98 221 aa8.8□□□□□ -1
RBM39-206ENST00000403542 TRBV7-9A0A0J9YWB2 115 aa8.79□□□□□ -1
RBM39-206ENST00000403542 C11orf44Q8N8P7 122 aa8.79□□□□□ -1
RBM39-206ENST00000403542 IGHV3-30-3P0DP02 117 aa8.79□□□□□ -1
RBM39-206ENST00000403542 TEN1Q86WV5 123 aa8.79□□□□□ -1
RBM39-206ENST00000403542 ERG28Q9UKR5 140 aa8.79□□□□□ -1
RBM39-206ENST00000403542 TRBV6-5A0A0K0K1A5 114 aa8.78□□□□□ -1
RBM39-206ENST00000403542 LEPROTO15243 131 aa8.78□□□□□ -1
RBM39-206ENST00000403542 SLC25A20O43772 301 aa8.78□□□□□ -1
RBM39-206ENST00000403542 ADAMTSL4-AS1Q5T5F5 129 aa8.78□□□□□ -1
RBM39-206ENST00000403542 ZNF625Q96I27 306 aaPredicted RBP8.78□□□□□ -1
RBM39-206ENST00000403542 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
RBM39-206ENST00000403542 A0A0J9YXY3 114 aa8.78□□□□□ -1
RBM39-206ENST00000403542 IGHV3-33P01772 117 aa8.78□□□□□ -1
RBM39-206ENST00000403542 Q6ZUT4 128 aa8.78□□□□□ -1
RBM39-206ENST00000403542 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
RBM39-206ENST00000403542 FLNAP21333 2647 aaKnown RBP8.78□□□□□ -1
RBM39-206ENST00000403542 CIDEAO60543 219 aa8.77□□□□□ -1.01
RBM39-206ENST00000403542 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1.01
RBM39-206ENST00000403542 NSUN5P1Q3KNT7 163 aa8.77□□□□□ -1.01
RBM39-206ENST00000403542 PPDPFLQ8WWR9 84 aa8.77□□□□□ -1.01
RBM39-206ENST00000403542 A0A1B0GV72 72 aa8.77□□□□□ -1.01
RBM39-206ENST00000403542 LYRM7Q5U5X0 104 aa8.76□□□□□ -1.01
RBM39-206ENST00000403542 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
RBM39-206ENST00000403542 TMEM263Q8WUH6 116 aaKnown RBP8.76□□□□□ -1.01
RBM39-206ENST00000403542 ITPR3Q14573 2671 aa8.76□□□□□ -1.01
RBM39-206ENST00000403542 GCN1Q92616 2671 aaKnown RBP8.76□□□□□ -1.01
RBM39-206ENST00000403542 APCP25054 2843 aa8.76□□□□□ -1.01
RBM39-206ENST00000403542 RBMY1BA6NDE4 496 aaKnown RBP8.76□□□□□ -1.01
RBM39-206ENST00000403542 RBMY1EA6NEQ0 496 aaKnown RBP8.76□□□□□ -1.01
RBM39-206ENST00000403542 BRI3O95415 125 aa8.76□□□□□ -1.01
RBM39-206ENST00000403542 RBMY1DP0C7P1 496 aaKnown RBP8.76□□□□□ -1.01
RBM39-206ENST00000403542 RHOHQ15669 191 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 FAM104AQ969W3 186 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 CLUHP3Q96NS8 147 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 GEMIN7Q9H840 131 aaKnown RBP8.75□□□□□ -1.01
RBM39-206ENST00000403542 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 TRAV26-1A0A087WT03 109 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 TEX49A0A1B0GTD5 131 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 PRORYQ9H606 182 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 TRBV20-1A0A075B6N2 111 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 TMEM61Q8N0U2 210 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 LINC01587Q99440 93 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
RBM39-206ENST00000403542 TRIAP1O43715 76 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 NDUFA7O95182 113 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 PRB1P04280 392 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 CLEC2BQ92478 149 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 UBE2E2Q96LR5 201 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 LINC00467Q9BRT7 94 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 TRGV11A0A075B6L2 103 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 CRYBA4P53673 196 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 XCL2Q9UBD3 114 aa8.74□□□□□ -1.01
RBM39-206ENST00000403542 SCGB1A1P11684 91 aa8.73□□□□□ -1.01
RBM39-206ENST00000403542 ATP6V0E2Q8NHE4 81 aa8.73□□□□□ -1.01
RBM39-206ENST00000403542 A0A1W2PRX2 142 aa8.72□□□□□ -1.01
RBM39-206ENST00000403542 GATA3P23771 443 aa8.72□□□□□ -1.01
RBM39-206ENST00000403542 H3BMM0 161 aa8.71□□□□□ -1.01
RBM39-206ENST00000403542 M0R2P5 195 aa8.71□□□□□ -1.01
RBM39-206ENST00000403542 LINC01356Q8N9X3 169 aa8.71□□□□□ -1.01
RBM39-206ENST00000403542 CDKN2A-AS1Q9UH64 79 aa8.71□□□□□ -1.01
RBM39-206ENST00000403542 ZNF702PQ9H963 129 aa8.71□□□□□ -1.02
RBM39-206ENST00000403542 VPREB3Q9UKI3 123 aa8.71□□□□□ -1.02
RBM39-206ENST00000403542 LINC01620Q4KN68 170 aa8.71□□□□□ -1.02
RBM39-206ENST00000403542 DGAT2L7PQ6IED9 249 aa8.71□□□□□ -1.02
RBM39-206ENST00000403542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.71□□□□□ -1.02
RBM39-206ENST00000403542 ODF3Q96PU9 254 aa8.71□□□□□ -1.02
RBM39-206ENST00000403542 LITAFQ99732 161 aa8.71□□□□□ -1.02
RBM39-206ENST00000403542 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
RBM39-206ENST00000403542 CRLF1O75462 422 aa8.7□□□□□ -1.02
RBM39-206ENST00000403542 RNF183Q96D59 192 aa8.7□□□□□ -1.02
RBM39-206ENST00000403542 CHCHD7Q9BUK0 85 aa8.7□□□□□ -1.02
RBM39-206ENST00000403542 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
RBM39-206ENST00000403542 DYNLRB2Q8TF09 96 aa8.69□□□□□ -1.02
RBM39-206ENST00000403542 UBE2D4Q9Y2X8 147 aa8.69□□□□□ -1.02
RBM39-206ENST00000403542 HIVEP2P31629 2446 aa8.69□□□□□ -1.02
RBM39-206ENST00000403542 TRAV13-1A0A0B4J241 112 aa8.69□□□□□ -1.02
RBM39-206ENST00000403542 KRTAP10-9P60411 292 aa8.69□□□□□ -1.02
RBM39-206ENST00000403542 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
RBM39-206ENST00000403542 COX6A2Q02221 97 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms