RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 COX6CP09669 75 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 CCL19Q99731 98 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 PIMREGQ9BSJ6 248 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 IGHV4OR15-8A0A075B7B6 117 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 A0A087WW49 117 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 KLLNB2CW77 178 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
HPS4-203ENST00000402105 DEFB131AP59861 70 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 ADAMTSL4-AS1Q5T5F5 129 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 TMEM263Q8WUH6 116 aaKnown RBP6.79□□□□□ -1.32
HPS4-203ENST00000402105 ZANQ9Y493 2812 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 JMJD1CQ15652 2540 aa6.79□□□□□ -1.32
HPS4-203ENST00000402105 IGHV4-30-2A0A087WSY4 118 aa6.78□□□□□ -1.32
HPS4-203ENST00000402105 IGHV3-53P01767 116 aa6.78□□□□□ -1.32
HPS4-203ENST00000402105 C11orf44Q8N8P7 122 aa6.78□□□□□ -1.32
HPS4-203ENST00000402105 UTP20O75691 2785 aaKnown RBP6.78□□□□□ -1.32
HPS4-203ENST00000402105 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.78□□□□□ -1.32
HPS4-203ENST00000402105 IGHG2P01859 326 aa6.78□□□□□ -1.32
HPS4-203ENST00000402105 DCANP1Q8TF63 244 aa6.78□□□□□ -1.32
HPS4-203ENST00000402105 H3BMM0 161 aa6.78□□□□□ -1.32
HPS4-203ENST00000402105 AVPP01185 164 aa6.78□□□□□ -1.32
HPS4-203ENST00000402105 UBE2WQ96B02 151 aa6.78□□□□□ -1.32
HPS4-203ENST00000402105 ABCA2Q9BZC7 2435 aa6.77□□□□□ -1.32
HPS4-203ENST00000402105 ITPR1Q14643 2758 aa6.77□□□□□ -1.33
HPS4-203ENST00000402105 LINC01587Q99440 93 aa6.77□□□□□ -1.33
HPS4-203ENST00000402105 ABCA12Q86UK0 2595 aa6.77□□□□□ -1.33
HPS4-203ENST00000402105 MED14OSP0DP75 135 aa6.77□□□□□ -1.33
HPS4-203ENST00000402105 RPL13AP40429 203 aaKnown RBP6.77□□□□□ -1.33
HPS4-203ENST00000402105 AMELXQ99217 191 aa6.77□□□□□ -1.33
HPS4-203ENST00000402105 TRAV13-1A0A0B4J241 112 aa6.77□□□□□ -1.33
HPS4-203ENST00000402105 A0A0J9YX75 114 aa6.77□□□□□ -1.33
HPS4-203ENST00000402105 LGALS9O00182 355 aa6.77□□□□□ -1.33
HPS4-203ENST00000402105 CCDC179H3BU77 68 aa6.76□□□□□ -1.33
HPS4-203ENST00000402105 APRG1Q8IVJ8 170 aa6.76□□□□□ -1.33
HPS4-203ENST00000402105 GAGE5Q13069 117 aa6.76□□□□□ -1.33
HPS4-203ENST00000402105 GAGE6Q13070 117 aa6.76□□□□□ -1.33
HPS4-203ENST00000402105 MEIG1Q5JSS6 88 aa6.76□□□□□ -1.33
HPS4-203ENST00000402105 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
HPS4-203ENST00000402105 ICOSQ9Y6W8 199 aa6.76□□□□□ -1.33
HPS4-203ENST00000402105 NAV2Q8IVL1 2488 aa6.76□□□□□ -1.33
HPS4-203ENST00000402105 DEFB112Q30KQ8 113 aa6.75□□□□□ -1.33
HPS4-203ENST00000402105 FAM19A4Q96LR4 140 aa6.75□□□□□ -1.33
HPS4-203ENST00000402105 FLNCQ14315 2725 aa6.75□□□□□ -1.33
HPS4-203ENST00000402105 IFITM1P13164 125 aa6.75□□□□□ -1.33
HPS4-203ENST00000402105 ZNF462Q96JM2 2506 aa6.75□□□□□ -1.33
HPS4-203ENST00000402105 RS1O15537 224 aa6.75□□□□□ -1.33
HPS4-203ENST00000402105 NDUFA7O95182 113 aa6.75□□□□□ -1.33
HPS4-203ENST00000402105 Q6ZSN1 163 aa6.75□□□□□ -1.33
HPS4-203ENST00000402105 A6NDX4 124 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 MSMBP08118 114 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 SLURP1P55000 103 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 NDUFV3P56181 108 aaKnown RBP6.74□□□□□ -1.33
HPS4-203ENST00000402105 RHOHQ15669 191 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 LRRK2Q5S007 2527 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 CFHR3Q02985 330 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 POM121L12Q8N7R1 296 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 XCL2Q9UBD3 114 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 FLNBO75369 2602 aaKnown RBP6.74□□□□□ -1.33
HPS4-203ENST00000402105 C9orf85Q96MD7 179 aa6.74□□□□□ -1.33
HPS4-203ENST00000402105 TRGV11A0A075B6L2 103 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 RBMY1A1P0DJD3 496 aaKnown RBP6.73□□□□□ -1.33
HPS4-203ENST00000402105 RBMY1CP0DJD4 496 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 HOXD3P31249 432 aaPredicted RBP6.73□□□□□ -1.33
HPS4-203ENST00000402105 RBMY1FQ15415 496 aaKnown RBP6.73□□□□□ -1.33
HPS4-203ENST00000402105 LINC00467Q9BRT7 94 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 CHCHD5Q9BSY4 110 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 TOMM7Q9P0U1 55 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 A0A0B4J2C4 111 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 TRBV10-2A0A0K0K1G8 114 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 GAGE12JA6NER3 117 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 H7C423 109 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 GAGE7O76087 117 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 GAGE12FP0CL80 117 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 GAGE12GP0CL81 117 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 GAGE12IP0CL82 117 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 GAGE4Q13068 117 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 NSUN5P1Q3KNT7 163 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 FN1P02751 2386 aaKnown RBP6.73□□□□□ -1.33
HPS4-203ENST00000402105 A0A1W2PRX2 142 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 NXPH4O95158 308 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 C19orf54Q5BKX5 351 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 SMIM20Q8N5G0 67 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 Q9H8V8 135 aa6.73□□□□□ -1.33
HPS4-203ENST00000402105 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
HPS4-203ENST00000402105 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
HPS4-203ENST00000402105 UCNP55089 124 aa6.72□□□□□ -1.33
HPS4-203ENST00000402105 DYNLRB2Q8TF09 96 aa6.72□□□□□ -1.33
HPS4-203ENST00000402105 K7EQG2 157 aa6.72□□□□□ -1.33
HPS4-203ENST00000402105 CIRBPQ14011 172 aaKnown RBP6.72□□□□□ -1.33
HPS4-203ENST00000402105 IGLV1-40P01703 118 aa6.71□□□□□ -1.33
HPS4-203ENST00000402105 TRGV1A0A0A0MS02 117 aa6.71□□□□□ -1.34
HPS4-203ENST00000402105 PRB1P04280 392 aa6.7□□□□□ -1.34
HPS4-203ENST00000402105 PRIMA1Q86XR5 153 aa6.7□□□□□ -1.34
HPS4-203ENST00000402105 C10orf105Q8TEF2 133 aa6.7□□□□□ -1.34
HPS4-203ENST00000402105 VSIG2Q96IQ7 327 aa6.7□□□□□ -1.34
HPS4-203ENST00000402105 RPL32P62910 135 aaKnown RBP6.7□□□□□ -1.34
HPS4-203ENST00000402105 SBSPONQ8IVN8 264 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms