RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 PROK2Q9HC23 129 aa8.46□□□□□ -1.06
CACNA1C-217ENST00000399641 UQCRQO14949 82 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 LINC01548A6NM66 108 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 TP53TG3Q9ULZ0 132 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 M0QXV9 152 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 Q8NA96 180 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 RNASE3P12724 160 aaKnown RBP8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 FAM19A3Q7Z5A8 133 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 TMEM14CQ9P0S9 112 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 Q6YL49 198 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 RITA1Q96K30 269 aa8.45□□□□□ -1.06
CACNA1C-217ENST00000399641 VPREB1P12018 145 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 C7orf65Q6ZTY9 151 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 SBSPONQ8IVN8 264 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 WT1-ASQ06250 92 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 U3KQK5 164 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 FRMPD3Q5JV73 1810 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 CCDC179H3BU77 68 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 MGAMO43451 1857 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 NCOR1O75376 2440 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 MDFICQ9P1T7 246 aa8.44□□□□□ -1.06
CACNA1C-217ENST00000399641 LINC00208Q96KT6 92 aa8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 FOXL2NBQ6ZUU3 175 aa8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 TOMM6Q96B49 74 aa8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 SMR3AQ99954 134 aa8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 ZNF503-AS2A6NEH8 195 aa8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 TDRG1Q3Y452 100 aa8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 ZNF706Q9Y5V0 76 aaPredicted RBP8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 LCTP09848 1927 aa8.43□□□□□ -1.06
CACNA1C-217ENST00000399641 ZFAND2AQ8N6M9 145 aa8.42□□□□□ -1.06
CACNA1C-217ENST00000399641 ANK1P16157 1881 aa8.42□□□□□ -1.06
CACNA1C-217ENST00000399641 DOCK10Q96BY6 2186 aa8.42□□□□□ -1.06
CACNA1C-217ENST00000399641 GREB1Q4ZG55 1949 aa8.42□□□□□ -1.06
CACNA1C-217ENST00000399641 UFSP1Q6NVU6 142 aa8.42□□□□□ -1.06
CACNA1C-217ENST00000399641 PRAC2D3DTV9 90 aa8.41□□□□□ -1.06
CACNA1C-217ENST00000399641 TRBV10-1A0A0K0K1A3 114 aa8.41□□□□□ -1.06
CACNA1C-217ENST00000399641 KIAA2026Q5HYC2 2103 aa8.41□□□□□ -1.06
CACNA1C-217ENST00000399641 ZSWIM8A7E2V4 1837 aa8.41□□□□□ -1.06
CACNA1C-217ENST00000399641 GOLGB1Q14789 3259 aaKnown RBP8.41□□□□□ -1.06
CACNA1C-217ENST00000399641 K7EMT4 169 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 TNFRSF13BO14836 293 aaPredicted RBP8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 PDE6GP18545 87 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 MIAQ16674 131 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 C10orf25Q5T742 122 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 CTRLP40313 264 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 OXLD1Q5BKU9 147 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 LYRM9A8MSI8 78 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 C11orf53Q8IXP5 236 aa8.4□□□□□ -1.06
CACNA1C-217ENST00000399641 ZGRF1Q86YA3 2104 aa8.4□□□□□ -1.07
CACNA1C-217ENST00000399641 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.07
CACNA1C-217ENST00000399641 LINC01545Q5VT33 79 aa8.4□□□□□ -1.07
CACNA1C-217ENST00000399641 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.07
CACNA1C-217ENST00000399641 CFAP126Q5VTH2 177 aa8.39□□□□□ -1.07
CACNA1C-217ENST00000399641 Q8N976 141 aa8.39□□□□□ -1.07
CACNA1C-217ENST00000399641 MAP6D1Q9H9H5 199 aa8.39□□□□□ -1.07
CACNA1C-217ENST00000399641 TNRC6AQ8NDV7 1962 aaKnown RBP8.39□□□□□ -1.07
CACNA1C-217ENST00000399641 WDR81Q562E7 1941 aa8.39□□□□□ -1.07
CACNA1C-217ENST00000399641 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 IGKV2-30P06310 120 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 SPRNQ5BIV9 151 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 LINC00322Q6ZN03 302 aaPredicted RBP8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 Q6ZSV7 163 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 MDFIQ99750 246 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 MYLKQ15746 1914 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 PCNX1Q96RV3 2341 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 IGLV5-52A0A0A0MRZ9 124 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 NDUFA7O95182 113 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 C6orf99Q4VX62 202 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 MUC6Q6W4X9 2439 aa8.38□□□□□ -1.07
CACNA1C-217ENST00000399641 NUPR1O60356 82 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 LRRK1Q38SD2 2015 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 HEATR5AQ86XA9 2040 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 Q6ZTI0 123 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 ABCA1O95477 2261 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 PTPRQQ9UMZ3 2332 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 FBXL19-AS1Q494R0 122 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 LINC00467Q9BRT7 94 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 DOCK11Q5JSL3 2073 aa8.37□□□□□ -1.07
CACNA1C-217ENST00000399641 A8MZ25 164 aa8.36□□□□□ -1.07
CACNA1C-217ENST00000399641 C15orf65H3BRN8 121 aa8.36□□□□□ -1.07
CACNA1C-217ENST00000399641 ACYP2P14621 99 aa8.36□□□□□ -1.07
CACNA1C-217ENST00000399641 NACAE9PAV3 2078 aa8.35□□□□□ -1.07
CACNA1C-217ENST00000399641 TRBV6-5A0A0K0K1A5 114 aa8.35□□□□□ -1.07
CACNA1C-217ENST00000399641 HIVEP2P31629 2446 aa8.35□□□□□ -1.07
CACNA1C-217ENST00000399641 E9PLD3 99 aa8.35□□□□□ -1.07
CACNA1C-217ENST00000399641 WNK2Q9Y3S1 2297 aa8.35□□□□□ -1.07
CACNA1C-217ENST00000399641 LINC01547P58512 204 aaPredicted RBP8.35□□□□□ -1.07
CACNA1C-217ENST00000399641 DYSFO75923 2080 aa8.34□□□□□ -1.07
CACNA1C-217ENST00000399641 CACNA1DQ01668 2161 aa8.34□□□□□ -1.07
CACNA1C-217ENST00000399641 MRPS12O15235 138 aaKnown RBP8.34□□□□□ -1.07
CACNA1C-217ENST00000399641 PLXNA3P51805 1871 aa8.34□□□□□ -1.07
CACNA1C-217ENST00000399641 J3QL48 77 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms