RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
PCDHGA11-201ENST00000398587 HIST2H2BCQ6DN03 193 aa10.64□□□□□ -0.71
PCDHGA11-201ENST00000398587 Q9HAA7 133 aa10.64□□□□□ -0.71
PCDHGA11-201ENST00000398587 P0DMU3 169 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 Q6ZS46 218 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 DEFB4AO15263 64 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 COL4A2P08572 1712 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 Q6ZUT4 128 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 UBL5Q9BZL1 73 aa10.63□□□□□ -0.71
PCDHGA11-201ENST00000398587 CEP350Q5VT06 3117 aa10.62□□□□□ -0.71
PCDHGA11-201ENST00000398587 CEMP1Q6PRD7 247 aaPredicted RBP10.62□□□□□ -0.71
PCDHGA11-201ENST00000398587 CAMK2N2Q96S95 79 aa10.62□□□□□ -0.71
PCDHGA11-201ENST00000398587 H0YGX0 51 aa10.62□□□□□ -0.71
PCDHGA11-201ENST00000398587 AVPP01185 164 aa10.62□□□□□ -0.71
PCDHGA11-201ENST00000398587 CCL18P55774 89 aa10.62□□□□□ -0.71
PCDHGA11-201ENST00000398587 NEXN-AS1Q8NBZ9 246 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 IGHV3-30P01768 117 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 BAALC-AS2P0C853 105 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 IGHV3-30-5P0DP03 117 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 C11orf21Q9P2W6 132 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 M0QY20 66 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 SMIM9A6NGZ8 99 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 KLLNB2CW77 178 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 ANKRD29Q8N6D5 301 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 DAND5Q8N907 189 aa10.61□□□□□ -0.71
PCDHGA11-201ENST00000398587 MRPS12O15235 138 aaKnown RBP10.6□□□□□ -0.71
PCDHGA11-201ENST00000398587 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
PCDHGA11-201ENST00000398587 CXCL5P42830 114 aa10.6□□□□□ -0.71
PCDHGA11-201ENST00000398587 RNASE3P12724 160 aaKnown RBP10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 CRYBA4P53673 196 aa10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 TINCRA0A1B0GVN0 87 aa10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 LINC01620Q4KN68 170 aa10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 PRR9Q5T870 116 aa10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 TRBV6-5A0A0K0K1A5 114 aa10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 CRIP2P52943 208 aaPredicted RBP10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 LINC01006Q8NI28 216 aa10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 DSCR8Q96T75 97 aa10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 ORMDL1Q9P0S3 153 aa10.59□□□□□ -0.71
PCDHGA11-201ENST00000398587 INAFM1C9JVW0 142 aa10.58□□□□□ -0.72
PCDHGA11-201ENST00000398587 TRBV27A0A0K0K1C4 114 aa10.58□□□□□ -0.72
PCDHGA11-201ENST00000398587 IGHV4-4A0A075B6R2 117 aa10.58□□□□□ -0.72
PCDHGA11-201ENST00000398587 DCANP1Q8TF63 244 aa10.58□□□□□ -0.72
PCDHGA11-201ENST00000398587 CNFNQ9BYD5 112 aa10.58□□□□□ -0.72
PCDHGA11-201ENST00000398587 KLK12Q9UKR0 248 aa10.58□□□□□ -0.72
PCDHGA11-201ENST00000398587 SPANXDQ9BXN6 97 aa10.57□□□□□ -0.72
PCDHGA11-201ENST00000398587 ZNF462Q96JM2 2506 aa10.57□□□□□ -0.72
PCDHGA11-201ENST00000398587 CFAP126Q5VTH2 177 aa10.57□□□□□ -0.72
PCDHGA11-201ENST00000398587 TEN1Q86WV5 123 aa10.57□□□□□ -0.72
PCDHGA11-201ENST00000398587 NRACQ8N912 160 aa10.57□□□□□ -0.72
PCDHGA11-201ENST00000398587 IGLV4-3A0A075B6K6 122 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 LYRM9A8MSI8 78 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 NDUFA1O15239 70 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 HAMPP81172 84 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 SPAG11BQ08648 103 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 FAM222AQ5U5X8 452 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 WFDC2Q14508 124 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 MIR7-3HGQ8N6C7 128 aa10.56□□□□□ -0.72
PCDHGA11-201ENST00000398587 CDK2AP2O75956 126 aa10.55□□□□□ -0.72
PCDHGA11-201ENST00000398587 MTORP42345 2549 aa10.55□□□□□ -0.72
PCDHGA11-201ENST00000398587 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA11-201ENST00000398587 ZNF22P17026 224 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA11-201ENST00000398587 A0A0J9YXY3 114 aa10.54□□□□□ -0.72
PCDHGA11-201ENST00000398587 RS1O15537 224 aa10.54□□□□□ -0.72
PCDHGA11-201ENST00000398587 CDKN2A-AS1Q9UH64 79 aa10.54□□□□□ -0.72
PCDHGA11-201ENST00000398587 HILS1P60008 231 aa10.54□□□□□ -0.72
PCDHGA11-201ENST00000398587 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
PCDHGA11-201ENST00000398587 MIAQ16674 131 aa10.54□□□□□ -0.72
PCDHGA11-201ENST00000398587 TM2D2Q9BX73 214 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 BRI3O95415 125 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 C18orf65Q6ZTR6 163 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 UTRNP46939 3433 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 RAI1Q7Z5J4 1906 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 TRBV6-4A0A1B0GX49 114 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 H7C423 109 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 ACYP1P07311 99 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 IGKV2D-26A0A0A0MRZ7 120 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
PCDHGA11-201ENST00000398587 DOPEY1Q5JWR5 2465 aa10.52□□□□□ -0.72
PCDHGA11-201ENST00000398587 FASNP49327 2511 aaKnown RBP10.52□□□□□ -0.72
PCDHGA11-201ENST00000398587 TNRC6BQ9UPQ9 1833 aaKnown RBP10.52□□□□□ -0.72
PCDHGA11-201ENST00000398587 PKD1L2Q7Z442 2459 aa10.52□□□□□ -0.72
PCDHGA11-201ENST00000398587 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.72
PCDHGA11-201ENST00000398587 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.72
PCDHGA11-201ENST00000398587 KRTAP10-9P60411 292 aa10.52□□□□□ -0.72
PCDHGA11-201ENST00000398587 LY6G6DO95868 133 aa10.52□□□□□ -0.73
PCDHGA11-201ENST00000398587 PYGO1Q9Y3Y4 419 aa10.52□□□□□ -0.73
PCDHGA11-201ENST00000398587 CRYGDP07320 174 aa10.51□□□□□ -0.73
PCDHGA11-201ENST00000398587 PROK1P58294 105 aa10.51□□□□□ -0.73
PCDHGA11-201ENST00000398587 UBE2BP63146 152 aa10.51□□□□□ -0.73
PCDHGA11-201ENST00000398587 H3BT86 120 aa10.51□□□□□ -0.73
PCDHGA11-201ENST00000398587 RPL18AQ02543 176 aaKnown RBP10.51□□□□□ -0.73
PCDHGA11-201ENST00000398587 ZNF580Q9UK33 172 aa10.51□□□□□ -0.73
PCDHGA11-201ENST00000398587 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
PCDHGA11-201ENST00000398587 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms