RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SHANK1Q9Y566 2161 aa7.82□□□□□ -1.16
COL4A6-203ENST00000394872 ZFHX2Q9C0A1 2572 aaPredicted RBP7.82□□□□□ -1.16
COL4A6-203ENST00000394872 TEN1Q86WV5 123 aa7.81□□□□□ -1.16
COL4A6-203ENST00000394872 LINC00574Q9H8X3 128 aa7.81□□□□□ -1.16
COL4A6-203ENST00000394872 FAM19A1Q7Z5A9 133 aa7.81□□□□□ -1.16
COL4A6-203ENST00000394872 MIFP14174 115 aa7.81□□□□□ -1.16
COL4A6-203ENST00000394872 MIAQ16674 131 aa7.81□□□□□ -1.16
COL4A6-203ENST00000394872 MED13LQ71F56 2210 aa7.8□□□□□ -1.16
COL4A6-203ENST00000394872 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
COL4A6-203ENST00000394872 G3V4G9 280 aa7.8□□□□□ -1.16
COL4A6-203ENST00000394872 LINC00467Q9BRT7 94 aa7.8□□□□□ -1.16
COL4A6-203ENST00000394872 MUC6Q6W4X9 2439 aa7.8□□□□□ -1.16
COL4A6-203ENST00000394872 C11orf71Q6IPW1 123 aa7.8□□□□□ -1.16
COL4A6-203ENST00000394872 IGKV2D-26A0A0A0MRZ7 120 aa7.8□□□□□ -1.16
COL4A6-203ENST00000394872 FRMD6-AS1P0C7T7 363 aa7.8□□□□□ -1.16
COL4A6-203ENST00000394872 WFDC2Q14508 124 aa7.8□□□□□ -1.16
COL4A6-203ENST00000394872 SEC61GP60059 68 aa7.79□□□□□ -1.16
COL4A6-203ENST00000394872 C10orf99Q6UWK7 81 aa7.79□□□□□ -1.16
COL4A6-203ENST00000394872 A0A096LNI7 61 aa7.79□□□□□ -1.16
COL4A6-203ENST00000394872 H7C423 109 aa7.79□□□□□ -1.16
COL4A6-203ENST00000394872 IGKV4-1P06312 121 aa7.79□□□□□ -1.16
COL4A6-203ENST00000394872 KIR2DL5BQ8NHK3 375 aa7.79□□□□□ -1.16
COL4A6-203ENST00000394872 PLCE1Q9P212 2302 aa7.79□□□□□ -1.16
COL4A6-203ENST00000394872 FSTL3O95633 263 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 NEXN-AS1Q8NBZ9 246 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 TRAV10A0A0B4J240 114 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 FOXI1Q12951 378 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
COL4A6-203ENST00000394872 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
COL4A6-203ENST00000394872 H3BT86 120 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 PDE6GP18545 87 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 P0C879 139 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 PRO3102Q9H379 93 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 C11orf1Q9H5F2 150 aa7.78□□□□□ -1.16
COL4A6-203ENST00000394872 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.16
COL4A6-203ENST00000394872 A0A0J9YXY3 114 aa7.77□□□□□ -1.17
COL4A6-203ENST00000394872 TAX1BP3O14907 124 aa7.77□□□□□ -1.17
COL4A6-203ENST00000394872 LY6LH3BQJ8 138 aa7.77□□□□□ -1.17
COL4A6-203ENST00000394872 CRYGBP07316 175 aa7.77□□□□□ -1.17
COL4A6-203ENST00000394872 ZNF702PQ9H963 129 aa7.77□□□□□ -1.17
COL4A6-203ENST00000394872 CFAP126Q5VTH2 177 aa7.77□□□□□ -1.17
COL4A6-203ENST00000394872 M0R2N4 97 aa7.77□□□□□ -1.17
COL4A6-203ENST00000394872 C7orf33Q8WU49 177 aa7.77□□□□□ -1.17
COL4A6-203ENST00000394872 LINC00322Q6ZN03 302 aaPredicted RBP7.76□□□□□ -1.17
COL4A6-203ENST00000394872 FAM208BQ5VWN6 2430 aa7.76□□□□□ -1.17
COL4A6-203ENST00000394872 GDF5OSQ5U4N7 250 aa7.76□□□□□ -1.17
COL4A6-203ENST00000394872 PSMG3-AS1Q96PY0 264 aa7.76□□□□□ -1.17
COL4A6-203ENST00000394872 TRBV6-8A0A0A6YYG3 113 aa7.76□□□□□ -1.17
COL4A6-203ENST00000394872 EBI3Q14213 229 aa7.76□□□□□ -1.17
COL4A6-203ENST00000394872 BRWD1-AS2P59051 145 aa7.76□□□□□ -1.17
COL4A6-203ENST00000394872 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.76□□□□□ -1.17
COL4A6-203ENST00000394872 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
COL4A6-203ENST00000394872 PTPRQQ9UMZ3 2332 aa7.75□□□□□ -1.17
COL4A6-203ENST00000394872 A0A1B0GXF2 115 aa7.75□□□□□ -1.17
COL4A6-203ENST00000394872 BPY2O14599 106 aa7.75□□□□□ -1.17
COL4A6-203ENST00000394872 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
COL4A6-203ENST00000394872 NCOA6Q14686 2063 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-203ENST00000394872 IGLC6P0CF74 106 aa7.75□□□□□ -1.17
COL4A6-203ENST00000394872 BBC3Q96PG8 261 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-203ENST00000394872 PLA2G2AP14555 144 aa7.75□□□□□ -1.17
COL4A6-203ENST00000394872 LINC01006Q8NI28 216 aa7.75□□□□□ -1.17
COL4A6-203ENST00000394872 IGLV2-8P01709 118 aa7.74□□□□□ -1.17
COL4A6-203ENST00000394872 LY6G6CO95867 125 aa7.74□□□□□ -1.17
COL4A6-203ENST00000394872 NUP210LQ5VU65 1888 aa7.74□□□□□ -1.17
COL4A6-203ENST00000394872 TRBV6-4A0A1B0GX49 114 aa7.74□□□□□ -1.17
COL4A6-203ENST00000394872 C18orf65Q6ZTR6 163 aa7.74□□□□□ -1.17
COL4A6-203ENST00000394872 PROK1P58294 105 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 CASC2Q6XLA1 102 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 CDKN2A-AS1Q9UH64 79 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 UPK3BQ9BT76 320 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 TNCP24821 2201 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 TCL1BO95988 128 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 UBE2D1P51668 147 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 DSCAMO60469 2012 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 CEP192Q8TEP8 1941 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 FREM1Q5H8C1 2179 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 HIVEP2P31629 2446 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 ALPK3Q96L96 1907 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 SYCNQ0VAF6 134 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 Q6ZPA2 131 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 XAGE1AQ9HD64 81 aa7.73□□□□□ -1.17
COL4A6-203ENST00000394872 ARHGAP21Q5T5U3 1957 aa7.72□□□□□ -1.17
COL4A6-203ENST00000394872 IGLV4-3A0A075B6K6 122 aa7.72□□□□□ -1.17
COL4A6-203ENST00000394872 TMEM223A0PJW6 202 aa7.72□□□□□ -1.17
COL4A6-203ENST00000394872 WFDC10AQ9H1F0 79 aa7.72□□□□□ -1.17
COL4A6-203ENST00000394872 EIF4EBP1Q13541 118 aaPredicted RBP7.72□□□□□ -1.17
COL4A6-203ENST00000394872 KPRPQ5T749 579 aaPredicted RBP7.72□□□□□ -1.17
COL4A6-203ENST00000394872 SPTSSBQ8NFR3 76 aa7.72□□□□□ -1.17
COL4A6-203ENST00000394872 PTH2Q96A98 100 aa7.72□□□□□ -1.17
COL4A6-203ENST00000394872 A0A0U1RQV1 116 aa7.71□□□□□ -1.17
COL4A6-203ENST00000394872 V9GYY9 64 aa7.71□□□□□ -1.17
COL4A6-203ENST00000394872 M0QY20 66 aa7.71□□□□□ -1.18
COL4A6-203ENST00000394872 Q8N976 141 aa7.71□□□□□ -1.18
COL4A6-203ENST00000394872 TRAV23DV6A0A075B6W5 121 aa7.71□□□□□ -1.18
COL4A6-203ENST00000394872 CREBBPQ92793 2442 aa7.71□□□□□ -1.18
COL4A6-203ENST00000394872 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.18
COL4A6-203ENST00000394872 SLPIP03973 132 aa7.7□□□□□ -1.18
COL4A6-203ENST00000394872 MLST8Q9BVC4 326 aa7.7□□□□□ -1.18
COL4A6-203ENST00000394872 ZNF22P17026 224 aaPredicted RBP7.7□□□□□ -1.18
COL4A6-203ENST00000394872 DCANP1Q8TF63 244 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms