RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TRBV10-1A0A0K0K1A3 114 aa10.37□□□□□ -0.75
USP49-203ENST00000394253 ZNF706Q9Y5V0 76 aaPredicted RBP10.37□□□□□ -0.75
USP49-203ENST00000394253 LOXP28300 417 aaPredicted RBP10.37□□□□□ -0.75
USP49-203ENST00000394253 Q8N9W7 124 aa10.37□□□□□ -0.75
USP49-203ENST00000394253 E7EQL1 145 aa10.37□□□□□ -0.75
USP49-203ENST00000394253 C1orf158Q8N1D5 194 aa10.37□□□□□ -0.75
USP49-203ENST00000394253 IGHV4-30-2A0A087WSY4 118 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 PINLYPA6NC86 204 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 IGLV2-23P01705 113 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 TRBV30A0A0K0K1B3 111 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 C3orf84H3BNL1 204 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 ARTNQ5T4W7 220 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 USP9XQ93008 2570 aaPredicted RBP10.36□□□□□ -0.75
USP49-203ENST00000394253 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 HIGD2AQ9BW72 106 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 WT1P19544 449 aaPredicted RBP10.36□□□□□ -0.75
USP49-203ENST00000394253 KLK12Q9UKR0 248 aa10.36□□□□□ -0.75
USP49-203ENST00000394253 GP9P14770 177 aa10.35□□□□□ -0.75
USP49-203ENST00000394253 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
USP49-203ENST00000394253 TRAV7A0A075B6U4 112 aa10.35□□□□□ -0.75
USP49-203ENST00000394253 CSRP1P21291 193 aaKnown RBP10.35□□□□□ -0.75
USP49-203ENST00000394253 HRCT1Q6UXD1 115 aa10.35□□□□□ -0.75
USP49-203ENST00000394253 ZNRD1Q9P1U0 126 aa10.35□□□□□ -0.75
USP49-203ENST00000394253 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
USP49-203ENST00000394253 Q6ZVQ6 151 aa10.35□□□□□ -0.75
USP49-203ENST00000394253 PIEZO2Q9H5I5 2752 aa10.35□□□□□ -0.75
USP49-203ENST00000394253 LINC00173Q6ZV60 143 aa10.35□□□□□ -0.75
USP49-203ENST00000394253 SCXQ7RTU7 201 aa10.34□□□□□ -0.75
USP49-203ENST00000394253 DHRS4-AS1Q9P1J3 65 aa10.34□□□□□ -0.75
USP49-203ENST00000394253 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
USP49-203ENST00000394253 TRBV7-6A0A0J9YX20 115 aa10.34□□□□□ -0.75
USP49-203ENST00000394253 CTSGP08311 255 aa10.34□□□□□ -0.75
USP49-203ENST00000394253 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
USP49-203ENST00000394253 ZNF581Q9P0T4 197 aa10.34□□□□□ -0.75
USP49-203ENST00000394253 C15orf65H3BRN8 121 aa10.33□□□□□ -0.76
USP49-203ENST00000394253 CCDC179H3BU77 68 aa10.33□□□□□ -0.76
USP49-203ENST00000394253 FOXL2NBQ6ZUU3 175 aa10.33□□□□□ -0.76
USP49-203ENST00000394253 LY6HO94772 140 aa10.33□□□□□ -0.76
USP49-203ENST00000394253 TPSG1Q9NRR2 321 aa10.33□□□□□ -0.76
USP49-203ENST00000394253 Q6Q795 121 aa10.32□□□□□ -0.76
USP49-203ENST00000394253 Q96MF0 132 aa10.32□□□□□ -0.76
USP49-203ENST00000394253 TRIAP1O43715 76 aa10.32□□□□□ -0.76
USP49-203ENST00000394253 KAAG1Q9UBP8 84 aa10.32□□□□□ -0.76
USP49-203ENST00000394253 ANKRD17O75179 2603 aaKnown RBP10.31□□□□□ -0.76
USP49-203ENST00000394253 FHL1Q13642 323 aa10.31□□□□□ -0.76
USP49-203ENST00000394253 ZFAND2AQ8N6M9 145 aa10.31□□□□□ -0.76
USP49-203ENST00000394253 Q8N976 141 aa10.31□□□□□ -0.76
USP49-203ENST00000394253 CRYGDP07320 174 aa10.31□□□□□ -0.76
USP49-203ENST00000394253 A0A087WZ39 114 aa10.3□□□□□ -0.76
USP49-203ENST00000394253 IGKV1D-37A0A075B6S9 117 aa10.3□□□□□ -0.76
USP49-203ENST00000394253 APRG1Q8IVJ8 170 aa10.3□□□□□ -0.76
USP49-203ENST00000394253 TRBV6-1A0A0K0K1D8 114 aa10.3□□□□□ -0.76
USP49-203ENST00000394253 NCOR2Q9Y618 2525 aa10.3□□□□□ -0.76
USP49-203ENST00000394253 IGF1P05019 195 aa10.29□□□□□ -0.76
USP49-203ENST00000394253 IGHV4-38-2P0DP08 117 aa10.29□□□□□ -0.76
USP49-203ENST00000394253 FLVCR1-AS1Q8TAF5 88 aa10.29□□□□□ -0.76
USP49-203ENST00000394253 C7orf33Q8WU49 177 aa10.29□□□□□ -0.76
USP49-203ENST00000394253 Q6ZS92 163 aa10.29□□□□□ -0.76
USP49-203ENST00000394253 FAM19A5Q7Z5A7 132 aaPredicted RBP10.29□□□□□ -0.76
USP49-203ENST00000394253 EBI3Q14213 229 aa10.28□□□□□ -0.76
USP49-203ENST00000394253 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
USP49-203ENST00000394253 UBE2D3P61077 147 aa10.28□□□□□ -0.76
USP49-203ENST00000394253 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
USP49-203ENST00000394253 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
USP49-203ENST00000394253 IGHV4-31P0DP07 118 aa10.28□□□□□ -0.76
USP49-203ENST00000394253 COX17Q14061 63 aa10.28□□□□□ -0.76
USP49-203ENST00000394253 FAM19A1Q7Z5A9 133 aa10.27□□□□□ -0.76
USP49-203ENST00000394253 PRO0255Q9UI72 69 aa10.27□□□□□ -0.76
USP49-203ENST00000394253 SLX1AQ9BQ83 275 aa10.27□□□□□ -0.77
USP49-203ENST00000394253 PRO0628Q9UI54 55 aa10.27□□□□□ -0.77
USP49-203ENST00000394253 CLUHP3Q96NS8 147 aa10.27□□□□□ -0.77
USP49-203ENST00000394253 ZFHX2Q9C0A1 2572 aaPredicted RBP10.27□□□□□ -0.77
USP49-203ENST00000394253 NUPR1O60356 82 aa10.27□□□□□ -0.77
USP49-203ENST00000394253 IGHV4-61A0A0C4DH41 118 aa10.27□□□□□ -0.77
USP49-203ENST00000394253 UBE2D1P51668 147 aa10.27□□□□□ -0.77
USP49-203ENST00000394253 PSPHP1O15172 72 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 FAM30AQ9NZY2 134 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 IGKV2-24A0A0C4DH68 120 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 LIMD2Q9BT23 127 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 REG3AQ06141 175 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 LINC00308Q8TCZ7 52 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 DEFB136Q30KP8 78 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 RNF144BQ7Z419 303 aa10.26□□□□□ -0.77
USP49-203ENST00000394253 CXCL6P80162 114 aa10.25□□□□□ -0.77
USP49-203ENST00000394253 WFDC13Q8IUB5 93 aa10.25□□□□□ -0.77
USP49-203ENST00000394253 B3GALT5-AS1P59052 145 aa10.25□□□□□ -0.77
USP49-203ENST00000394253 Q6JHZ5 121 aa10.25□□□□□ -0.77
USP49-203ENST00000394253 LINC00269Q8N2A0 174 aa10.25□□□□□ -0.77
USP49-203ENST00000394253 C2orf70A6NJV1 201 aa10.25□□□□□ -0.77
USP49-203ENST00000394253 SLURP1P55000 103 aa10.25□□□□□ -0.77
USP49-203ENST00000394253 CELA1Q9UNI1 258 aa10.25□□□□□ -0.77
USP49-203ENST00000394253 CFAP126Q5VTH2 177 aa10.24□□□□□ -0.77
USP49-203ENST00000394253 TTTY13Q9BZ97 58 aa10.24□□□□□ -0.77
USP49-203ENST00000394253 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
USP49-203ENST00000394253 LRCOL1A6NCL2 159 aa10.24□□□□□ -0.77
USP49-203ENST00000394253 SIRPDQ9H106 197 aa10.24□□□□□ -0.77
USP49-203ENST00000394253 IGLV11-55A0A075B6I3 123 aa10.24□□□□□ -0.77
USP49-203ENST00000394253 IGKV1-17P01599 117 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms