RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 CRLF1O75462 422 aa8.76□□□□□ -1.01
R3HDM2-203ENST00000393811 SMIM20Q8N5G0 67 aa8.76□□□□□ -1.01
R3HDM2-203ENST00000393811 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 A0A0J9YX75 114 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 NSUN5P1Q3KNT7 163 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 DYNLRB2Q8TF09 96 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 FASNP49327 2511 aaKnown RBP8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 H3BUA1 57 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 ELANEP08246 267 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 USP9XQ93008 2570 aaPredicted RBP8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 PRM2P04554 102 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 C10orf99Q6UWK7 81 aa8.75□□□□□ -1.01
R3HDM2-203ENST00000393811 CCDC179H3BU77 68 aa8.74□□□□□ -1.01
R3HDM2-203ENST00000393811 NBL1P41271 181 aa8.74□□□□□ -1.01
R3HDM2-203ENST00000393811 IGHV1-58A0A0C4DH39 117 aa8.74□□□□□ -1.01
R3HDM2-203ENST00000393811 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
R3HDM2-203ENST00000393811 PRIMA1Q86XR5 153 aa8.73□□□□□ -1.01
R3HDM2-203ENST00000393811 DCANP1Q8TF63 244 aa8.73□□□□□ -1.01
R3HDM2-203ENST00000393811 SETD2Q9BYW2 2564 aaPredicted RBP8.73□□□□□ -1.01
R3HDM2-203ENST00000393811 NXPH4O95158 308 aa8.73□□□□□ -1.01
R3HDM2-203ENST00000393811 IGHV3-53P01767 116 aa8.73□□□□□ -1.01
R3HDM2-203ENST00000393811 IGHV4-59P01825 116 aa8.73□□□□□ -1.01
R3HDM2-203ENST00000393811 TLN2Q9Y4G6 2542 aa8.73□□□□□ -1.01
R3HDM2-203ENST00000393811 TRBV30A0A0K0K1B3 111 aa8.72□□□□□ -1.01
R3HDM2-203ENST00000393811 MSMBP08118 114 aa8.72□□□□□ -1.01
R3HDM2-203ENST00000393811 ZNF415Q09FC8 603 aa8.72□□□□□ -1.01
R3HDM2-203ENST00000393811 C19orf54Q5BKX5 351 aa8.72□□□□□ -1.01
R3HDM2-203ENST00000393811 C9orf85Q96MD7 179 aa8.72□□□□□ -1.01
R3HDM2-203ENST00000393811 Q9H8V8 135 aa8.72□□□□□ -1.01
R3HDM2-203ENST00000393811 K7EMT4 169 aa8.72□□□□□ -1.01
R3HDM2-203ENST00000393811 TMEM101Q96IK0 257 aa8.72□□□□□ -1.01
R3HDM2-203ENST00000393811 A6NDX4 124 aa8.71□□□□□ -1.01
R3HDM2-203ENST00000393811 MIAQ16674 131 aa8.71□□□□□ -1.01
R3HDM2-203ENST00000393811 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.01
R3HDM2-203ENST00000393811 MAPK1IP1LQ8NDC0 245 aa8.71□□□□□ -1.02
R3HDM2-203ENST00000393811 H3BT86 120 aa8.71□□□□□ -1.02
R3HDM2-203ENST00000393811 H7C423 109 aa8.71□□□□□ -1.02
R3HDM2-203ENST00000393811 GNLYP22749 145 aa8.71□□□□□ -1.02
R3HDM2-203ENST00000393811 SBSPONQ8IVN8 264 aa8.71□□□□□ -1.02
R3HDM2-203ENST00000393811 DEFB136Q30KP8 78 aa8.7□□□□□ -1.02
R3HDM2-203ENST00000393811 FAM19A4Q96LR4 140 aa8.7□□□□□ -1.02
R3HDM2-203ENST00000393811 ASH1LQ9NR48 2969 aaKnown RBP8.7□□□□□ -1.02
R3HDM2-203ENST00000393811 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
R3HDM2-203ENST00000393811 UBE2E2Q96LR5 201 aa8.7□□□□□ -1.02
R3HDM2-203ENST00000393811 AMELXQ99217 191 aa8.7□□□□□ -1.02
R3HDM2-203ENST00000393811 CHCHD5Q9BSY4 110 aa8.7□□□□□ -1.02
R3HDM2-203ENST00000393811 DNAL4O96015 105 aa8.7□□□□□ -1.02
R3HDM2-203ENST00000393811 IGHV4-30-2A0A087WSY4 118 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 UBE2L6O14933 153 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 VSIG2Q96IQ7 327 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 TRGV1A0A0A0MS02 117 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 C19orf84I3L1E1 186 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 K7EQG2 157 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 HOXD3P31249 432 aaPredicted RBP8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 APRG1Q8IVJ8 170 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 COPS9Q8WXC6 57 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 SPANXA1Q9NS26 97 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 XCL2Q9UBD3 114 aa8.69□□□□□ -1.02
R3HDM2-203ENST00000393811 SPENQ96T58 3664 aaKnown RBP8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 DEFB112Q30KQ8 113 aa8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 GAGE2AQ6NT46 116 aa8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 FAM236AA0A1B0GUQ0 79 aa8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 FAM236BA0A1B0GV22 79 aa8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 LINC00467Q9BRT7 94 aa8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 B4DSR2 109 aa8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 OR13C6PQ8NH95 151 aa8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 CITED1Q99966 193 aa8.68□□□□□ -1.02
R3HDM2-203ENST00000393811 POM121L12Q8N7R1 296 aa8.67□□□□□ -1.02
R3HDM2-203ENST00000393811 SONP18583 2426 aaKnown RBP8.67□□□□□ -1.02
R3HDM2-203ENST00000393811 RELNP78509 3460 aa8.67□□□□□ -1.02
R3HDM2-203ENST00000393811 RS1O15537 224 aa8.67□□□□□ -1.02
R3HDM2-203ENST00000393811 TMEM61Q8N0U2 210 aa8.67□□□□□ -1.02
R3HDM2-203ENST00000393811 MRPS36P82909 103 aaKnown RBP8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 POLQO75417 2590 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 TINCRA0A1B0GVN0 87 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 HERV-K104P63124 156 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 C9orf153Q5TBE3 101 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 C11orf44Q8N8P7 122 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 ODF3Q96PU9 254 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 IGLV1-40P01703 118 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 BAALC-AS2P0C853 105 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 SLURP1P55000 103 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 KLK9Q2XQG4 91 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 Q9UF83 564 aa8.66□□□□□ -1.02
R3HDM2-203ENST00000393811 DCHS2Q6V1P9 2916 aa8.65□□□□□ -1.02
R3HDM2-203ENST00000393811 LST1O00453 97 aa8.65□□□□□ -1.02
R3HDM2-203ENST00000393811 ZNF462Q96JM2 2506 aa8.65□□□□□ -1.02
R3HDM2-203ENST00000393811 C10orf105Q8TEF2 133 aa8.65□□□□□ -1.02
R3HDM2-203ENST00000393811 PYGO1Q9Y3Y4 419 aa8.65□□□□□ -1.02
R3HDM2-203ENST00000393811 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.03
R3HDM2-203ENST00000393811 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.03
R3HDM2-203ENST00000393811 LINC00158P58513 81 aa8.64□□□□□ -1.03
R3HDM2-203ENST00000393811 SPANXDQ9BXN6 97 aa8.64□□□□□ -1.03
R3HDM2-203ENST00000393811 SPANXCQ9NY87 97 aa8.64□□□□□ -1.03
R3HDM2-203ENST00000393811 CRPP02741 224 aa8.64□□□□□ -1.03
R3HDM2-203ENST00000393811 HERVK_113P63121 156 aa8.64□□□□□ -1.03
R3HDM2-203ENST00000393811 SVIPQ8NHG7 77 aa8.64□□□□□ -1.03
R3HDM2-203ENST00000393811 INSP01308 110 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms