RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 UBE2D3P61077 147 aa11.97□□□□□ -0.49
PDZD4-202ENST00000393758 UBE2D2P62837 147 aa11.97□□□□□ -0.49
PDZD4-202ENST00000393758 LINC01619G3V211 115 aa11.96□□□□□ -0.49
PDZD4-202ENST00000393758 NOTCH2Q04721 2471 aa11.96□□□□□ -0.5
PDZD4-202ENST00000393758 A0A1W2PRX2 142 aa11.96□□□□□ -0.5
PDZD4-202ENST00000393758 IGLV4-3A0A075B6K6 122 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 A0A087WW49 117 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 XCL2Q9UBD3 114 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 A0A0J9YX75 114 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 GATA3P23771 443 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 TRIAP1O43715 76 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
PDZD4-202ENST00000393758 TRAV4A0A0B4J268 109 aa11.94□□□□□ -0.5
PDZD4-202ENST00000393758 SOCS3O14543 225 aa11.94□□□□□ -0.5
PDZD4-202ENST00000393758 IFITM1P13164 125 aa11.94□□□□□ -0.5
PDZD4-202ENST00000393758 KLLNB2CW77 178 aa11.94□□□□□ -0.5
PDZD4-202ENST00000393758 GAGE5Q13069 117 aa11.94□□□□□ -0.5
PDZD4-202ENST00000393758 GAGE6Q13070 117 aa11.94□□□□□ -0.5
PDZD4-202ENST00000393758 ICOSQ9Y6W8 199 aa11.94□□□□□ -0.5
PDZD4-202ENST00000393758 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
PDZD4-202ENST00000393758 NBL1P41271 181 aa11.93□□□□□ -0.5
PDZD4-202ENST00000393758 C19orf54Q5BKX5 351 aa11.93□□□□□ -0.5
PDZD4-202ENST00000393758 FHL3Q13643 280 aa11.93□□□□□ -0.5
PDZD4-202ENST00000393758 HOXD3P31249 432 aaPredicted RBP11.93□□□□□ -0.5
PDZD4-202ENST00000393758 PRIMA1Q86XR5 153 aa11.93□□□□□ -0.5
PDZD4-202ENST00000393758 APRG1Q8IVJ8 170 aa11.93□□□□□ -0.5
PDZD4-202ENST00000393758 B4DSR2 109 aa11.92□□□□□ -0.5
PDZD4-202ENST00000393758 LINC00315P59091 139 aa11.92□□□□□ -0.5
PDZD4-202ENST00000393758 LGALS9O00182 355 aa11.92□□□□□ -0.5
PDZD4-202ENST00000393758 YAE1D1Q9NRH1 226 aa11.92□□□□□ -0.5
PDZD4-202ENST00000393758 KIF25-AS1Q9Y6Z4 181 aa11.92□□□□□ -0.5
PDZD4-202ENST00000393758 A6NDX4 124 aa11.91□□□□□ -0.5
PDZD4-202ENST00000393758 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
PDZD4-202ENST00000393758 UBE2L6O14933 153 aa11.91□□□□□ -0.5
PDZD4-202ENST00000393758 SLURP1P55000 103 aa11.91□□□□□ -0.5
PDZD4-202ENST00000393758 DCANP1Q8TF63 244 aa11.91□□□□□ -0.5
PDZD4-202ENST00000393758 MTORP42345 2549 aa11.91□□□□□ -0.5
PDZD4-202ENST00000393758 ZNF415Q09FC8 603 aa11.91□□□□□ -0.5
PDZD4-202ENST00000393758 Q9H8V8 135 aa11.91□□□□□ -0.5
PDZD4-202ENST00000393758 GAGE12JA6NER3 117 aa11.9□□□□□ -0.5
PDZD4-202ENST00000393758 GAGE7O76087 117 aa11.9□□□□□ -0.5
PDZD4-202ENST00000393758 ELANEP08246 267 aa11.9□□□□□ -0.5
PDZD4-202ENST00000393758 GAGE12FP0CL80 117 aa11.9□□□□□ -0.5
PDZD4-202ENST00000393758 GAGE12GP0CL81 117 aa11.9□□□□□ -0.5
PDZD4-202ENST00000393758 GAGE12IP0CL82 117 aa11.9□□□□□ -0.5
PDZD4-202ENST00000393758 GAGE4Q13068 117 aa11.9□□□□□ -0.5
PDZD4-202ENST00000393758 H3BUA1 57 aa11.9□□□□□ -0.5
PDZD4-202ENST00000393758 TMEM263Q8WUH6 116 aaKnown RBP11.9□□□□□ -0.5
PDZD4-202ENST00000393758 RS1O15537 224 aa11.9□□□□□ -0.51
PDZD4-202ENST00000393758 CFHR3Q02985 330 aa11.89□□□□□ -0.51
PDZD4-202ENST00000393758 OR13C6PQ8NH95 151 aa11.89□□□□□ -0.51
PDZD4-202ENST00000393758 TRBV10-2A0A0K0K1G8 114 aa11.89□□□□□ -0.51
PDZD4-202ENST00000393758 CRLF1O75462 422 aa11.88□□□□□ -0.51
PDZD4-202ENST00000393758 C11orf68Q9H3H3 251 aaKnown RBP11.88□□□□□ -0.51
PDZD4-202ENST00000393758 A0A0B4J2C4 111 aa11.88□□□□□ -0.51
PDZD4-202ENST00000393758 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
PDZD4-202ENST00000393758 IGHV1-58A0A0C4DH39 117 aa11.87□□□□□ -0.51
PDZD4-202ENST00000393758 NSUN5P1Q3KNT7 163 aa11.87□□□□□ -0.51
PDZD4-202ENST00000393758 AVPP01185 164 aa11.87□□□□□ -0.51
PDZD4-202ENST00000393758 Q9UF83 564 aa11.87□□□□□ -0.51
PDZD4-202ENST00000393758 K7EMT4 169 aa11.87□□□□□ -0.51
PDZD4-202ENST00000393758 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
PDZD4-202ENST00000393758 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
PDZD4-202ENST00000393758 EPG5Q9HCE0 2579 aa11.86□□□□□ -0.51
PDZD4-202ENST00000393758 TRBV7-9A0A0J9YWB2 115 aa11.86□□□□□ -0.51
PDZD4-202ENST00000393758 NDUFV3P56181 108 aaKnown RBP11.86□□□□□ -0.51
PDZD4-202ENST00000393758 TRBV6-5A0A0K0K1A5 114 aa11.86□□□□□ -0.51
PDZD4-202ENST00000393758 K7EQG2 157 aa11.86□□□□□ -0.51
PDZD4-202ENST00000393758 DNAL4O96015 105 aa11.86□□□□□ -0.51
PDZD4-202ENST00000393758 SMIM20Q8N5G0 67 aa11.86□□□□□ -0.51
PDZD4-202ENST00000393758 PKD1L2Q7Z442 2459 aa11.86□□□□□ -0.51
PDZD4-202ENST00000393758 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
PDZD4-202ENST00000393758 LINC00467Q9BRT7 94 aa11.86□□□□□ -0.51
PDZD4-202ENST00000393758 C9orf85Q96MD7 179 aa11.85□□□□□ -0.51
PDZD4-202ENST00000393758 TRGV2A0A075B6R0 118 aa11.84□□□□□ -0.51
PDZD4-202ENST00000393758 STHQ8IWL8 128 aa11.84□□□□□ -0.51
PDZD4-202ENST00000393758 ANKRD17O75179 2603 aaKnown RBP11.84□□□□□ -0.51
PDZD4-202ENST00000393758 HRNRQ86YZ3 2850 aaPredicted RBP11.84□□□□□ -0.51
PDZD4-202ENST00000393758 HIVEP2P31629 2446 aa11.84□□□□□ -0.51
PDZD4-202ENST00000393758 CCDC179H3BU77 68 aa11.84□□□□□ -0.51
PDZD4-202ENST00000393758 GAGE2AQ6NT46 116 aa11.83□□□□□ -0.51
PDZD4-202ENST00000393758 LINC00158P58513 81 aa11.83□□□□□ -0.52
PDZD4-202ENST00000393758 RPL32P62910 135 aaKnown RBP11.83□□□□□ -0.52
PDZD4-202ENST00000393758 MIAQ16674 131 aa11.82□□□□□ -0.52
PDZD4-202ENST00000393758 TMEM61Q8N0U2 210 aa11.82□□□□□ -0.52
PDZD4-202ENST00000393758 POM121L12Q8N7R1 296 aa11.82□□□□□ -0.52
PDZD4-202ENST00000393758 RPL36AP83881 106 aaKnown RBP11.82□□□□□ -0.52
PDZD4-202ENST00000393758 RPL36ALQ969Q0 106 aaKnown RBP11.82□□□□□ -0.52
PDZD4-202ENST00000393758 VSIG2Q96IQ7 327 aa11.81□□□□□ -0.52
PDZD4-202ENST00000393758 CHCHD5Q9BSY4 110 aa11.81□□□□□ -0.52
PDZD4-202ENST00000393758 NXPH4O95158 308 aa11.81□□□□□ -0.52
PDZD4-202ENST00000393758 TMEM101Q96IK0 257 aa11.81□□□□□ -0.52
PDZD4-202ENST00000393758 NDUFA7O95182 113 aa11.81□□□□□ -0.52
PDZD4-202ENST00000393758 INSP01308 110 aa11.81□□□□□ -0.52
PDZD4-202ENST00000393758 C18orf65Q6ZTR6 163 aa11.81□□□□□ -0.52
PDZD4-202ENST00000393758 IGLV1-40P01703 118 aa11.8□□□□□ -0.52
PDZD4-202ENST00000393758 PEMTQ9UBM1 199 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms