RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 COX7A2LO14548 114 aa12.61□□□□□ -0.39
PTPA-207ENST00000393370 TMEM258P61165 79 aa12.61□□□□□ -0.39
PTPA-207ENST00000393370 VSIG2Q96IQ7 327 aa12.61□□□□□ -0.39
PTPA-207ENST00000393370 BAALC-AS2P0C853 105 aa12.6□□□□□ -0.39
PTPA-207ENST00000393370 Q5XG85 94 aa12.6□□□□□ -0.39
PTPA-207ENST00000393370 IGKV3-7A0A075B6H7 116 aa12.59□□□□□ -0.39
PTPA-207ENST00000393370 SOCS3O14543 225 aa12.59□□□□□ -0.39
PTPA-207ENST00000393370 CD28P10747 220 aa12.59□□□□□ -0.39
PTPA-207ENST00000393370 KLRB1Q12918 225 aa12.59□□□□□ -0.39
PTPA-207ENST00000393370 ATMQ13315 3056 aa12.59□□□□□ -0.39
PTPA-207ENST00000393370 IGHV3OR16-10A0A075B7F0 116 aa12.59□□□□□ -0.39
PTPA-207ENST00000393370 BEAN1Q3B7T3 259 aa12.59□□□□□ -0.39
PTPA-207ENST00000393370 ACACAQ13085 2346 aa12.59□□□□□ -0.39
PTPA-207ENST00000393370 RPL18AQ02543 176 aaKnown RBP12.58□□□□□ -0.4
PTPA-207ENST00000393370 Q8N2B8 174 aa12.58□□□□□ -0.4
PTPA-207ENST00000393370 NCOR2Q9Y618 2525 aa12.58□□□□□ -0.4
PTPA-207ENST00000393370 RNF152Q8N8N0 203 aa12.58□□□□□ -0.4
PTPA-207ENST00000393370 UPK3BQ9BT76 320 aa12.58□□□□□ -0.4
PTPA-207ENST00000393370 DEFB109BQ30KR1 87 aa12.57□□□□□ -0.4
PTPA-207ENST00000393370 CHD8Q9HCK8 2581 aa12.57□□□□□ -0.4
PTPA-207ENST00000393370 NACAE9PAV3 2078 aa12.56□□□□□ -0.4
PTPA-207ENST00000393370 UNQ9165/PRO28630Q6UXU0 137 aa12.56□□□□□ -0.4
PTPA-207ENST00000393370 LRBAP50851 2863 aa12.55□□□□□ -0.4
PTPA-207ENST00000393370 APC2O95996 2303 aa12.55□□□□□ -0.4
PTPA-207ENST00000393370 LY6HO94772 140 aa12.55□□□□□ -0.4
PTPA-207ENST00000393370 FAM218AQ96MZ4 157 aa12.55□□□□□ -0.4
PTPA-207ENST00000393370 SERP2Q8N6R1 65 aa12.54□□□□□ -0.4
PTPA-207ENST00000393370 KLK9Q2XQG4 91 aa12.54□□□□□ -0.4
PTPA-207ENST00000393370 KLK9Q9UKQ9 250 aa12.54□□□□□ -0.4
PTPA-207ENST00000393370 A0A087WVE0 104 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 IGKV3D-7A0A0C4DH55 119 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 KLLNB2CW77 178 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 MED13LQ71F56 2210 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 IGF2RP11717 2491 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 A0A0U1RRA0 63 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 B9A039 149 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 TIMM17BO60830 172 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 LINC00308Q8TCZ7 52 aa12.53□□□□□ -0.4
PTPA-207ENST00000393370 INAFM2P0DMQ5 153 aa12.52□□□□□ -0.41
PTPA-207ENST00000393370 Q9HAA7 133 aa12.52□□□□□ -0.41
PTPA-207ENST00000393370 PYGO1Q9Y3Y4 419 aa12.52□□□□□ -0.41
PTPA-207ENST00000393370 TRBV12-3P01733 135 aa12.51□□□□□ -0.41
PTPA-207ENST00000393370 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
PTPA-207ENST00000393370 TINCRA0A1B0GVN0 87 aa12.5□□□□□ -0.41
PTPA-207ENST00000393370 ZNF625Q96I27 306 aaPredicted RBP12.5□□□□□ -0.41
PTPA-207ENST00000393370 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
PTPA-207ENST00000393370 IGHV3-16A0A0C4DH30 117 aa12.5□□□□□ -0.41
PTPA-207ENST00000393370 FAM222AQ5U5X8 452 aa12.49□□□□□ -0.41
PTPA-207ENST00000393370 ZFHX3Q15911 3703 aa12.49□□□□□ -0.41
PTPA-207ENST00000393370 IGHG2P01859 326 aa12.49□□□□□ -0.41
PTPA-207ENST00000393370 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
PTPA-207ENST00000393370 LINC01561Q8N1V8 128 aa12.48□□□□□ -0.41
PTPA-207ENST00000393370 C9orf129Q5T035 196 aaKnown RBP12.48□□□□□ -0.41
PTPA-207ENST00000393370 C10orf105Q8TEF2 133 aa12.48□□□□□ -0.41
PTPA-207ENST00000393370 NDUFA1O15239 70 aa12.47□□□□□ -0.41
PTPA-207ENST00000393370 CDKN2A-AS1Q9UH64 79 aa12.47□□□□□ -0.41
PTPA-207ENST00000393370 ANKRD11Q6UB99 2663 aaPredicted RBP12.47□□□□□ -0.41
PTPA-207ENST00000393370 MALP21145 153 aa12.47□□□□□ -0.41
PTPA-207ENST00000393370 HOXD3P31249 432 aaPredicted RBP12.47□□□□□ -0.41
PTPA-207ENST00000393370 CIRBPQ14011 172 aaKnown RBP12.47□□□□□ -0.41
PTPA-207ENST00000393370 USP17L23D6RBM5 183 aa12.46□□□□□ -0.41
PTPA-207ENST00000393370 PRIMA1Q86XR5 153 aa12.46□□□□□ -0.41
PTPA-207ENST00000393370 PIEZO2Q9H5I5 2752 aa12.46□□□□□ -0.41
PTPA-207ENST00000393370 ASH1LQ9NR48 2969 aaKnown RBP12.46□□□□□ -0.41
PTPA-207ENST00000393370 DNAL4O96015 105 aa12.46□□□□□ -0.41
PTPA-207ENST00000393370 LINC00846Q9NV44 126 aa12.46□□□□□ -0.41
PTPA-207ENST00000393370 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.42
PTPA-207ENST00000393370 SYNJ2BPP57105 145 aa12.46□□□□□ -0.42
PTPA-207ENST00000393370 MRAPQ8TCY5 172 aa12.46□□□□□ -0.42
PTPA-207ENST00000393370 C14orf132Q9NPU4 83 aa12.46□□□□□ -0.42
PTPA-207ENST00000393370 FHL2Q14192 279 aa12.45□□□□□ -0.42
PTPA-207ENST00000393370 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.45□□□□□ -0.42
PTPA-207ENST00000393370 Q9H8V8 135 aa12.45□□□□□ -0.42
PTPA-207ENST00000393370 MINOS1-NBL1R4GNA1 71 aa12.45□□□□□ -0.42
PTPA-207ENST00000393370 IGHV3-73A0A0B4J1V6 119 aa12.44□□□□□ -0.42
PTPA-207ENST00000393370 Q6JHZ5 121 aa12.44□□□□□ -0.42
PTPA-207ENST00000393370 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.44□□□□□ -0.42
PTPA-207ENST00000393370 PROK1P58294 105 aa12.43□□□□□ -0.42
PTPA-207ENST00000393370 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.43□□□□□ -0.42
PTPA-207ENST00000393370 IGKV2-29A2NJV5 120 aaPredicted RBP12.43□□□□□ -0.42
PTPA-207ENST00000393370 UBE2D4Q9Y2X8 147 aa12.43□□□□□ -0.42
PTPA-207ENST00000393370 IGKV3-20P01619 116 aa12.42□□□□□ -0.42
PTPA-207ENST00000393370 Q9UF83 564 aa12.42□□□□□ -0.42
PTPA-207ENST00000393370 NDUFA4O00483 81 aa12.41□□□□□ -0.42
PTPA-207ENST00000393370 RHPN1-AS1Q9BWJ2 59 aa12.41□□□□□ -0.42
PTPA-207ENST00000393370 FAM223BA6NKX1 122 aa12.41□□□□□ -0.42
PTPA-207ENST00000393370 K7ENP7 123 aa12.41□□□□□ -0.42
PTPA-207ENST00000393370 BSNQ9UPA5 3926 aa12.4□□□□□ -0.42
PTPA-207ENST00000393370 CHCHD7Q9BUK0 85 aa12.4□□□□□ -0.42
PTPA-207ENST00000393370 EDN2P20800 178 aa12.39□□□□□ -0.43
PTPA-207ENST00000393370 UCNP55089 124 aa12.39□□□□□ -0.43
PTPA-207ENST00000393370 COX6A2Q02221 97 aa12.39□□□□□ -0.43
PTPA-207ENST00000393370 IGFL3Q6UXB1 125 aa12.39□□□□□ -0.43
PTPA-207ENST00000393370 FAM223AQ8IWN6 122 aa12.39□□□□□ -0.43
PTPA-207ENST00000393370 IGHV3-11P01762 117 aa12.39□□□□□ -0.43
PTPA-207ENST00000393370 ZFP36P26651 326 aaKnown RBP12.38□□□□□ -0.43
PTPA-207ENST00000393370 PIK3CD-AS1Q5SR53 167 aa12.38□□□□□ -0.43
PTPA-207ENST00000393370 HIST2H2BCQ6DN03 193 aa12.38□□□□□ -0.43
PTPA-207ENST00000393370 HIST2H2BDQ6DRA6 164 aa12.38□□□□□ -0.43
PTPA-207ENST00000393370 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms