RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 ACACBO00763 2458 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 TMEM262E9PQX1 116 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 HERVK_113P61574 105 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 SHISA2Q6UWI4 295 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 IGHV3OR16-10A0A075B7F0 116 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 PRM2P04554 102 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 SCGB1C2P0DMR2 95 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 BLCAPP62952 87 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 BEAN1Q3B7T3 259 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 CLEC2BQ92478 149 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 RNF152Q8N8N0 203 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 RHOHQ15669 191 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 FAM159AQ6UWV7 190 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 SPANXDQ9BXN6 97 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 SPANXCQ9NY87 97 aa8.31□□□□□ -1.08
PDCD4-202ENST00000393104 LGALS3P17931 250 aaKnown RBP8.3□□□□□ -1.08
PDCD4-202ENST00000393104 EDA2RQ9HAV5 297 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 RPL11P62913 178 aaKnown RBP8.3□□□□□ -1.08
PDCD4-202ENST00000393104 LYRM7Q5U5X0 104 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 BRD3OSQ6XYD6 125 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 MOB4Q9Y3A3 225 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 CR1P17927 2039 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 C10orf99Q6UWK7 81 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 LINC01587Q99440 93 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 CHCHD7Q9BUK0 85 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 ICOSQ9Y6W8 199 aa8.3□□□□□ -1.08
PDCD4-202ENST00000393104 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
PDCD4-202ENST00000393104 FAM74A4Q5TZK3 123 aa8.29□□□□□ -1.08
PDCD4-202ENST00000393104 C15orf53Q8NAA6 179 aa8.29□□□□□ -1.08
PDCD4-202ENST00000393104 RNASE13Q5GAN3 156 aaKnown RBP8.29□□□□□ -1.08
PDCD4-202ENST00000393104 I3L3M4 83 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 LST1O00453 97 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 TMEM61Q8N0U2 210 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 PYGO1Q9Y3Y4 419 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 SPTA1P02549 2419 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 IGHV4-38-2P0DP08 117 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 DUX3Q96PT4 197 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 SPXQ9BT56 116 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 IFITM1P13164 125 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 KRTAP10-9P60411 292 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 GAGE2BQ13066 116 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 GAGE2EQ4V326 116 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 VSIG2Q96IQ7 327 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 FAM110AQ9BQ89 295 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 GAGE2DQ9UEU5 116 aa8.28□□□□□ -1.08
PDCD4-202ENST00000393104 IGHV4-31P0DP07 118 aa8.27□□□□□ -1.08
PDCD4-202ENST00000393104 Q8N2B8 174 aa8.27□□□□□ -1.08
PDCD4-202ENST00000393104 TRBV7-7A0A0K0K1E9 115 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 GAGE12JA6NER3 117 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 GAGE7O76087 117 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 GAGE12FP0CL80 117 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 GAGE12GP0CL81 117 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 GAGE12IP0CL82 117 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 GAGE4Q13068 117 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 A6NDX4 124 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 MIAQ16674 131 aa8.27□□□□□ -1.09
PDCD4-202ENST00000393104 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
PDCD4-202ENST00000393104 SOSTDC1Q6X4U4 206 aa8.26□□□□□ -1.09
PDCD4-202ENST00000393104 DAZ1Q9NQZ3 744 aaKnown RBP8.26□□□□□ -1.09
PDCD4-202ENST00000393104 SETXQ7Z333 2677 aaKnown RBP8.26□□□□□ -1.09
PDCD4-202ENST00000393104 F5H697 171 aa8.26□□□□□ -1.09
PDCD4-202ENST00000393104 TMEM95Q3KNT9 176 aa8.26□□□□□ -1.09
PDCD4-202ENST00000393104 DAND5Q8N907 189 aa8.26□□□□□ -1.09
PDCD4-202ENST00000393104 UBE2D4Q9Y2X8 147 aa8.26□□□□□ -1.09
PDCD4-202ENST00000393104 FAM240AA0A1B0GVK7 77 aa8.25□□□□□ -1.09
PDCD4-202ENST00000393104 H3BMM0 161 aa8.25□□□□□ -1.09
PDCD4-202ENST00000393104 NRGNQ92686 78 aa8.25□□□□□ -1.09
PDCD4-202ENST00000393104 UBE2WQ96B02 151 aa8.25□□□□□ -1.09
PDCD4-202ENST00000393104 CHCHD5Q9BSY4 110 aa8.25□□□□□ -1.09
PDCD4-202ENST00000393104 NF1P21359 2839 aa8.25□□□□□ -1.09
PDCD4-202ENST00000393104 COX6A2Q02221 97 aa8.25□□□□□ -1.09
PDCD4-202ENST00000393104 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.25□□□□□ -1.09
PDCD4-202ENST00000393104 USMG5Q96IX5 58 aa8.25□□□□□ -1.09
PDCD4-202ENST00000393104 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 RBMY1BA6NDE4 496 aaKnown RBP8.24□□□□□ -1.09
PDCD4-202ENST00000393104 RBMY1EA6NEQ0 496 aaKnown RBP8.24□□□□□ -1.09
PDCD4-202ENST00000393104 RBMY1DP0C7P1 496 aaKnown RBP8.24□□□□□ -1.09
PDCD4-202ENST00000393104 H3BUA1 57 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 K7EMT4 169 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 K7EQG2 157 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 SNCGO76070 127 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 AVPP01185 164 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 PSMB8P28062 276 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 NPC2P61916 151 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 TRAV8-4A0A0B4J246 113 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 ZNF56Q15929 161 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 SPINK13Q1W4C9 94 aa8.24□□□□□ -1.09
PDCD4-202ENST00000393104 CHD6Q8TD26 2715 aa8.23□□□□□ -1.09
PDCD4-202ENST00000393104 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
PDCD4-202ENST00000393104 TINCRA0A1B0GVN0 87 aa8.23□□□□□ -1.09
PDCD4-202ENST00000393104 H3BT86 120 aa8.23□□□□□ -1.09
PDCD4-202ENST00000393104 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.23□□□□□ -1.094e-8■■■■■ 30.4
PDCD4-202ENST00000393104 IGHV1OR15-1A0A075B7D0 117 aa8.23□□□□□ -1.09
PDCD4-202ENST00000393104 IGKV3-20P01619 116 aa8.23□□□□□ -1.09
PDCD4-202ENST00000393104 C2orf82Q6UX34 121 aa8.23□□□□□ -1.09
PDCD4-202ENST00000393104 FAM218AQ96MZ4 157 aa8.23□□□□□ -1.09
PDCD4-202ENST00000393104 HERV-K104P63124 156 aa8.22□□□□□ -1.09
PDCD4-202ENST00000393104 LY6EQ16553 131 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms