RNA–Protein interactions for RNA: ENST00000391089.1

SNORA48.4-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.4-201ENST00000391089 RNASE8Q8TDE3 154 aaKnown RBP3.89□□□□□ -1.79
SNORA48.4-201ENST00000391089 LINC01600Q96MT4 127 aa3.89□□□□□ -1.79
SNORA48.4-201ENST00000391089 PRADC1Q9BSG0 188 aa3.89□□□□□ -1.79
SNORA48.4-201ENST00000391089 MUC4Q99102 2169 aa3.89□□□□□ -1.79
SNORA48.4-201ENST00000391089 FLNAP21333 2647 aaKnown RBP3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGKV3-7A0A075B6H7 116 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGKV2D-26A0A0A0MRZ7 120 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 TRAV8-6A0A0B4J262 113 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 A0A0B4J2C4 111 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGHV1-58A0A0C4DH39 117 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 ZNF815PA8K554 130 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 J3QQQ9 107 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 WIPF1O43516 503 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 TFPI2P48307 235 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 SLURP1P55000 103 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 PROK1P58294 105 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 HERV-K104P63124 156 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 SRSF9Q13242 221 aaKnown RBP eCLIP3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 CIRBPQ14011 172 aaKnown RBP3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 ODF3L2Q3SX64 289 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 FAM74A4Q5TZK3 123 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 LINC01561Q8N1V8 128 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 ATP6V0E2Q8NHE4 81 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 MUC7Q8TAX7 377 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 PHLDA1Q8WV24 401 aaPredicted RBP3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 NRGNQ92686 78 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 CUBNO60494 3623 aa3.88□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGLV4-3A0A075B6K6 122 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 TRAV12-2A0A075B6T6 113 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 A0A087WWL8 130 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 A0A0J9YY99 117 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 J3KRW8 73 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 PF4P02776 101 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 P0DMU3 169 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 FAM231AP0DMU4 169 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 FAM231CP0DMU5 169 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 TCTAP57738 103 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 KRTAP1-1Q07627 177 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 RRN3P1Q2M238 152 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 C12orf74Q32Q52 190 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 KHDC1LQ5JSQ8 128 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 AMMECR1LQ6DCA0 310 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 C10orf99Q6UWK7 81 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 WFDC11Q8NEX6 87 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 ZNF479Q96JC4 524 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 UBE2D4Q9Y2X8 147 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 SPCS1Q9Y6A9 102 aa3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 NSD1Q96L73 2696 aaPredicted RBP3.87□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGLL5B9A064 214 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 H3BUT2 72 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 K7EQD1 137 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 COX6CP09669 75 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 CD28P10747 220 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 AZU1P20160 251 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 OCIAD2Q56VL3 154 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 TMEM170BQ5T4T1 132 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 C9orf66Q5T8R8 295 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 ZFAND6Q6FIF0 208 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 DGAT2L7PQ6IED9 249 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 Q6ZQT7 251 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 C10orf126Q8N4M7 172 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 GEMIN7Q9H840 131 aaKnown RBP3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 SPANXCQ9NY87 97 aa3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 ANK3Q12955 4377 aaKnown RBP3.86□□□□□ -1.79
SNORA48.4-201ENST00000391089 A0A1B0GUV1 79 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 KNCNA6PVL3 124 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 LYRM9A8MSI8 78 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 H3BMG7 143 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 SPRY2O43597 315 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGHV3-30P01768 117 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGHV3-30-5P0DP03 117 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 ZNF22P17026 224 aaPredicted RBP3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 FXYD2P54710 66 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 FXYD7P58549 80 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 UBE2D3P61077 147 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 UBE2D2P62837 147 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 C1orf158Q8N1D5 194 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 VSIG2Q96IQ7 327 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 CHCHD7Q9BUK0 85 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 NHP2Q9NX24 153 aaKnown RBP3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 PRO1854Q9UHT4 67 aa3.85□□□□□ -1.79
SNORA48.4-201ENST00000391089 ANK2Q01484 3957 aa3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 MXRA5Q9NR99 2828 aa3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGLV5-39A0A0G2JS06 123 aa3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 TRBV30A0A0K0K1B3 111 aa3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 RBMY1BA6NDE4 496 aaKnown RBP3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 RBMY1EA6NEQ0 496 aaKnown RBP3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 NDUFA1O15239 70 aa3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 RBMY1DP0C7P1 496 aaKnown RBP3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 RBMY1A1P0DJD3 496 aaKnown RBP3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 RBMY1CP0DJD4 496 aa3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 IGHV3-30-3P0DP02 117 aa3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 SCGB1A1P11684 91 aa3.84□□□□□ -1.79
SNORA48.4-201ENST00000391089 APOC4P55056 127 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms