RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 Q6ZS92 163 aa9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 LOXL1Q08397 574 aaPredicted RBP9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 M0QXV9 152 aa9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 GDF5OSQ5U4N7 250 aa9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 TRIAP1O43715 76 aa9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 ELANEP08246 267 aa9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 FLG2Q5D862 2391 aaPredicted RBP9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 SP5Q6BEB4 398 aaPredicted RBP9.55□□□□□ -0.88
SRGAP3-202ENST00000383836 CTSGP08311 255 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 IGF2RP11717 2491 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 TIMM17BO60830 172 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 TIRAPP58753 221 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 NEXN-AS1Q8NBZ9 246 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 NDUFA1O15239 70 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 BLCAPP62952 87 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 IL17DQ8TAD2 202 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 RITA1Q96K30 269 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 MLST8Q9BVC4 326 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 A0A0J9YY99 117 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 Q6ZSR3 168 aa9.54□□□□□ -0.88
SRGAP3-202ENST00000383836 RNF223E7ERA6 249 aa9.53□□□□□ -0.88
SRGAP3-202ENST00000383836 C20orf203Q8NBC4 194 aa9.53□□□□□ -0.88
SRGAP3-202ENST00000383836 H0Y9J4 135 aa9.53□□□□□ -0.88
SRGAP3-202ENST00000383836 CFAP126Q5VTH2 177 aa9.53□□□□□ -0.88
SRGAP3-202ENST00000383836 PRR15LQ9BU68 103 aa9.52□□□□□ -0.89
SRGAP3-202ENST00000383836 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
SRGAP3-202ENST00000383836 COX7BP24311 80 aa9.52□□□□□ -0.89
SRGAP3-202ENST00000383836 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
SRGAP3-202ENST00000383836 PRAC2D3DTV9 90 aa9.52□□□□□ -0.89
SRGAP3-202ENST00000383836 MRPS12O15235 138 aaKnown RBP9.52□□□□□ -0.89
SRGAP3-202ENST00000383836 JMJD1CQ15652 2540 aa9.52□□□□□ -0.89
SRGAP3-202ENST00000383836 XGP55808 180 aa9.52□□□□□ -0.89
SRGAP3-202ENST00000383836 J3QLI3 93 aa9.51□□□□□ -0.89
SRGAP3-202ENST00000383836 IGLV2-8P01709 118 aa9.51□□□□□ -0.89
SRGAP3-202ENST00000383836 A6NED7 52 aa9.51□□□□□ -0.89
SRGAP3-202ENST00000383836 IGHV4OR15-8A0A075B7B6 117 aa9.51□□□□□ -0.89
SRGAP3-202ENST00000383836 A0A087WW49 117 aa9.51□□□□□ -0.89
SRGAP3-202ENST00000383836 IGHV7-81A0A0B4J1V7 117 aa9.51□□□□□ -0.89
SRGAP3-202ENST00000383836 Q6Q795 121 aa9.51□□□□□ -0.89
SRGAP3-202ENST00000383836 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 PRSS33Q8NF86 280 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 TP53TG3Q9ULZ0 132 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 COL4A6Q14031 1691 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 PCSK5Q92824 1860 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 USP17L23D6RBM5 183 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 CCL18P55774 89 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 SNURFQ9Y675 71 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 CENPVL3A0A0U1RRI6 287 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
SRGAP3-202ENST00000383836 LYRM9A8MSI8 78 aa9.49□□□□□ -0.89
SRGAP3-202ENST00000383836 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
SRGAP3-202ENST00000383836 TMEM223A0PJW6 202 aa9.49□□□□□ -0.89
SRGAP3-202ENST00000383836 CHD8Q9HCK8 2581 aa9.49□□□□□ -0.89
SRGAP3-202ENST00000383836 IGLV2-23P01705 113 aa9.49□□□□□ -0.89
SRGAP3-202ENST00000383836 HHLA3Q9XRX5 114 aa9.49□□□□□ -0.89
SRGAP3-202ENST00000383836 LINC00322Q6ZN03 302 aaPredicted RBP9.48□□□□□ -0.89
SRGAP3-202ENST00000383836 MAPKAPK5-AS1Q8N8E1 139 aa9.48□□□□□ -0.89
SRGAP3-202ENST00000383836 U3KQK5 164 aa9.48□□□□□ -0.89
SRGAP3-202ENST00000383836 SMIM9A6NGZ8 99 aa9.48□□□□□ -0.89
SRGAP3-202ENST00000383836 SPRY4Q9C004 299 aa9.48□□□□□ -0.89
SRGAP3-202ENST00000383836 CTSZQ9UBR2 303 aa9.48□□□□□ -0.89
SRGAP3-202ENST00000383836 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
SRGAP3-202ENST00000383836 IGHV3-30P01768 117 aa9.47□□□□□ -0.89
SRGAP3-202ENST00000383836 IGHV3-30-5P0DP03 117 aa9.47□□□□□ -0.89
SRGAP3-202ENST00000383836 SMIM26A0A096LP01 95 aa9.47□□□□□ -0.89
SRGAP3-202ENST00000383836 K7ERS5 55 aa9.47□□□□□ -0.89
SRGAP3-202ENST00000383836 HRCT1Q6UXD1 115 aa9.46□□□□□ -0.89
SRGAP3-202ENST00000383836 CCL24O00175 119 aa9.46□□□□□ -0.9
SRGAP3-202ENST00000383836 FAM19A3Q7Z5A8 133 aa9.46□□□□□ -0.9
SRGAP3-202ENST00000383836 VPREB3Q9UKI3 123 aa9.46□□□□□ -0.9
SRGAP3-202ENST00000383836 UBE2AP49459 152 aa9.46□□□□□ -0.9
SRGAP3-202ENST00000383836 SERP1Q9Y6X1 66 aa9.46□□□□□ -0.9
SRGAP3-202ENST00000383836 USP24Q9UPU5 2620 aa9.46□□□□□ -0.9
SRGAP3-202ENST00000383836 LINC00308Q8TCZ7 52 aa9.45□□□□□ -0.9
SRGAP3-202ENST00000383836 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
SRGAP3-202ENST00000383836 E7EUB6 86 aa9.45□□□□□ -0.9
SRGAP3-202ENST00000383836 ODF3L1Q8IXM7 274 aa9.45□□□□□ -0.9
SRGAP3-202ENST00000383836 DEFB136Q30KP8 78 aa9.45□□□□□ -0.9
SRGAP3-202ENST00000383836 SCXQ7RTU7 201 aa9.45□□□□□ -0.9
SRGAP3-202ENST00000383836 P0C879 139 aa9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 SPRNQ5BIV9 151 aa9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 IGFL3Q6UXB1 125 aa9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 MBD6Q96DN6 1003 aa9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 SLURP1P55000 103 aa9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 MUC22E2RYF6 1773 aaPredicted RBP9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 TMEM263Q8WUH6 116 aaKnown RBP9.44□□□□□ -0.9
SRGAP3-202ENST00000383836 INSL3P51460 131 aa9.43□□□□□ -0.9
SRGAP3-202ENST00000383836 LST1O00453 97 aa9.43□□□□□ -0.9
SRGAP3-202ENST00000383836 IGKV1D-37A0A075B6S9 117 aa9.43□□□□□ -0.9
SRGAP3-202ENST00000383836 SLPIP03973 132 aa9.43□□□□□ -0.9
SRGAP3-202ENST00000383836 TRBV10-1A0A0K0K1A3 114 aa9.43□□□□□ -0.9
SRGAP3-202ENST00000383836 C5orf56Q8N8D9 126 aa9.43□□□□□ -0.9
SRGAP3-202ENST00000383836 ZNF80P51504 273 aaPredicted RBP9.43□□□□□ -0.9
SRGAP3-202ENST00000383836 CASC2Q6XLA1 102 aa9.43□□□□□ -0.9
SRGAP3-202ENST00000383836 K7EMT4 169 aa9.42□□□□□ -0.9
SRGAP3-202ENST00000383836 MAPK1IP1LQ8NDC0 245 aa9.42□□□□□ -0.9
SRGAP3-202ENST00000383836 H7C423 109 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms