RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SMIM9A6NGZ8 99 aa11□□□□□ -0.65
CTNS-202ENST00000381870 NDUFA4O00483 81 aa11□□□□□ -0.65
CTNS-202ENST00000381870 IGHV3-11P01762 117 aa11□□□□□ -0.65
CTNS-202ENST00000381870 SIRPDQ9H106 197 aa11□□□□□ -0.65
CTNS-202ENST00000381870 EDN2P20800 178 aa11□□□□□ -0.65
CTNS-202ENST00000381870 DAZ2Q13117 558 aaKnown RBP11□□□□□ -0.65
CTNS-202ENST00000381870 DAZ4Q86SG3 579 aaKnown RBP11□□□□□ -0.65
CTNS-202ENST00000381870 LRRC75A-AS1Q8N1F1 130 aa11□□□□□ -0.65
CTNS-202ENST00000381870 C5orf56Q8N8D9 126 aa11□□□□□ -0.65
CTNS-202ENST00000381870 DAZ1Q9NQZ3 744 aaKnown RBP11□□□□□ -0.65
CTNS-202ENST00000381870 DAZ3Q9NR90 486 aaKnown RBP11□□□□□ -0.65
CTNS-202ENST00000381870 COL12A1Q99715 3063 aa11□□□□□ -0.65
CTNS-202ENST00000381870 ATRXP46100 2492 aa10.99□□□□□ -0.65
CTNS-202ENST00000381870 RHPN1-AS1Q9BWJ2 59 aa10.99□□□□□ -0.65
CTNS-202ENST00000381870 IGKV3-20P01619 116 aa10.99□□□□□ -0.65
CTNS-202ENST00000381870 COX7CP15954 63 aa10.99□□□□□ -0.65
CTNS-202ENST00000381870 C2orf48Q96LS8 159 aa10.99□□□□□ -0.65
CTNS-202ENST00000381870 EDA2RQ9HAV5 297 aa10.99□□□□□ -0.65
CTNS-202ENST00000381870 ANKHD1Q8IWZ3 2542 aaKnown RBP10.99□□□□□ -0.65
CTNS-202ENST00000381870 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
CTNS-202ENST00000381870 C5orf38Q86SI9 138 aa10.98□□□□□ -0.65
CTNS-202ENST00000381870 FAM223AQ8IWN6 122 aa10.98□□□□□ -0.65
CTNS-202ENST00000381870 ACACBO00763 2458 aa10.98□□□□□ -0.65
CTNS-202ENST00000381870 SDIM1Q6ZPB5 146 aa10.98□□□□□ -0.65
CTNS-202ENST00000381870 CYSTM1Q9H1C7 97 aa10.98□□□□□ -0.65
CTNS-202ENST00000381870 PYGO1Q9Y3Y4 419 aa10.98□□□□□ -0.65
CTNS-202ENST00000381870 IGHV3-73A0A0B4J1V6 119 aa10.97□□□□□ -0.65
CTNS-202ENST00000381870 COX7A2LO14548 114 aa10.97□□□□□ -0.65
CTNS-202ENST00000381870 GAGE2AQ6NT46 116 aa10.97□□□□□ -0.65
CTNS-202ENST00000381870 Q8N2B8 174 aa10.97□□□□□ -0.65
CTNS-202ENST00000381870 A0A0U1RRA0 63 aa10.97□□□□□ -0.65
CTNS-202ENST00000381870 A0A1B0GX51 115 aa10.97□□□□□ -0.65
CTNS-202ENST00000381870 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
CTNS-202ENST00000381870 ATP5G1P05496 136 aa10.96□□□□□ -0.65
CTNS-202ENST00000381870 C19orf54Q5BKX5 351 aa10.96□□□□□ -0.65
CTNS-202ENST00000381870 Q8NA96 180 aa10.96□□□□□ -0.65
CTNS-202ENST00000381870 TINCRA0A1B0GVN0 87 aa10.96□□□□□ -0.66
CTNS-202ENST00000381870 hADV29S1A0JD25 119 aa10.96□□□□□ -0.66
CTNS-202ENST00000381870 IGHG2P01859 326 aa10.96□□□□□ -0.66
CTNS-202ENST00000381870 PROK1P58294 105 aa10.96□□□□□ -0.66
CTNS-202ENST00000381870 TIRAPP58753 221 aa10.96□□□□□ -0.66
CTNS-202ENST00000381870 HRNRQ86YZ3 2850 aaPredicted RBP10.96□□□□□ -0.66
CTNS-202ENST00000381870 BAALC-AS2P0C853 105 aa10.95□□□□□ -0.66
CTNS-202ENST00000381870 PEMTQ9UBM1 199 aa10.95□□□□□ -0.66
CTNS-202ENST00000381870 TLN1Q9Y490 2541 aaKnown RBP10.95□□□□□ -0.66
CTNS-202ENST00000381870 SPTA1P02549 2419 aa10.95□□□□□ -0.66
CTNS-202ENST00000381870 CRYGAP11844 174 aa10.95□□□□□ -0.66
CTNS-202ENST00000381870 CXCL5P42830 114 aa10.95□□□□□ -0.66
CTNS-202ENST00000381870 BEAN1Q3B7T3 259 aa10.95□□□□□ -0.66
CTNS-202ENST00000381870 LINC00308Q8TCZ7 52 aa10.95□□□□□ -0.66
CTNS-202ENST00000381870 SPTBN1Q01082 2364 aaKnown RBP10.94□□□□□ -0.66
CTNS-202ENST00000381870 TIMM17BO60830 172 aa10.94□□□□□ -0.66
CTNS-202ENST00000381870 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
CTNS-202ENST00000381870 Q9UF83 564 aa10.94□□□□□ -0.66
CTNS-202ENST00000381870 K7ENP7 123 aa10.93□□□□□ -0.66
CTNS-202ENST00000381870 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
CTNS-202ENST00000381870 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
CTNS-202ENST00000381870 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
CTNS-202ENST00000381870 RS1O15537 224 aa10.93□□□□□ -0.66
CTNS-202ENST00000381870 FAM218AQ96MZ4 157 aa10.93□□□□□ -0.66
CTNS-202ENST00000381870 UBTD1Q9HAC8 227 aa10.92□□□□□ -0.66
CTNS-202ENST00000381870 IGHV1OR15-1A0A075B7D0 117 aa10.92□□□□□ -0.66
CTNS-202ENST00000381870 NDUFA1O15239 70 aa10.92□□□□□ -0.66
CTNS-202ENST00000381870 HIST1H4AP62805 103 aaKnown RBP10.92□□□□□ -0.66
CTNS-202ENST00000381870 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.92□□□□□ -0.66
CTNS-202ENST00000381870 KIR2DL5BQ8NHK3 375 aa10.92□□□□□ -0.66
CTNS-202ENST00000381870 NBASA2RRP1 2371 aa10.92□□□□□ -0.66
CTNS-202ENST00000381870 IGHV3OR16-10A0A075B7F0 116 aa10.91□□□□□ -0.66
CTNS-202ENST00000381870 TRAV13-1A0A0B4J241 112 aa10.91□□□□□ -0.66
CTNS-202ENST00000381870 SPINK13Q1W4C9 94 aa10.91□□□□□ -0.66
CTNS-202ENST00000381870 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
CTNS-202ENST00000381870 UBE2D4Q9Y2X8 147 aa10.91□□□□□ -0.66
CTNS-202ENST00000381870 PKD1L2Q7Z442 2459 aa10.91□□□□□ -0.66
CTNS-202ENST00000381870 RPS28P62857 69 aaKnown RBP10.9□□□□□ -0.66
CTNS-202ENST00000381870 CHCHD7Q9BUK0 85 aa10.9□□□□□ -0.66
CTNS-202ENST00000381870 MOB4Q9Y3A3 225 aa10.9□□□□□ -0.66
CTNS-202ENST00000381870 CELSR1Q9NYQ6 3014 aa10.9□□□□□ -0.66
CTNS-202ENST00000381870 ATOX1O00244 68 aa10.9□□□□□ -0.67
CTNS-202ENST00000381870 TRACP01848 142 aa10.9□□□□□ -0.67
CTNS-202ENST00000381870 CIRBPQ14011 172 aaKnown RBP10.9□□□□□ -0.67
CTNS-202ENST00000381870 Q9H8V8 135 aa10.9□□□□□ -0.67
CTNS-202ENST00000381870 Q9HAA7 133 aa10.9□□□□□ -0.67
CTNS-202ENST00000381870 C11orf71Q6IPW1 123 aa10.89□□□□□ -0.67
CTNS-202ENST00000381870 PF4V1P10720 104 aa10.89□□□□□ -0.67
CTNS-202ENST00000381870 KLRB1Q12918 225 aa10.89□□□□□ -0.67
CTNS-202ENST00000381870 LINC00467Q9BRT7 94 aa10.89□□□□□ -0.67
CTNS-202ENST00000381870 NACAE9PAV3 2078 aa10.88□□□□□ -0.67
CTNS-202ENST00000381870 KNCNA6PVL3 124 aa10.88□□□□□ -0.67
CTNS-202ENST00000381870 OR13C6PQ8NH95 151 aa10.88□□□□□ -0.67
CTNS-202ENST00000381870 HTN1P15515 57 aa10.87□□□□□ -0.67
CTNS-202ENST00000381870 COX6A2Q02221 97 aa10.87□□□□□ -0.67
CTNS-202ENST00000381870 HOXD3P31249 432 aaPredicted RBP10.87□□□□□ -0.67
CTNS-202ENST00000381870 CDSNQ15517 529 aa10.87□□□□□ -0.67
CTNS-202ENST00000381870 EPG5Q9HCE0 2579 aa10.87□□□□□ -0.67
CTNS-202ENST00000381870 IGHV3-38A0A0C4DH36 116 aa10.86□□□□□ -0.67
CTNS-202ENST00000381870 Q6ZSN1 163 aa10.86□□□□□ -0.67
CTNS-202ENST00000381870 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
CTNS-202ENST00000381870 COL6A6A6NMZ7 2263 aa10.86□□□□□ -0.67
CTNS-202ENST00000381870 IGKV3D-7A0A0C4DH55 119 aa10.86□□□□□ -0.67
CTNS-202ENST00000381870 OXTP01178 125 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms