RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 C3orf22Q8N5N4 141 aa10.59□□□□□ -0.71
SNPH-201ENST00000381867 NEXN-AS1Q8NBZ9 246 aa10.59□□□□□ -0.71
SNPH-201ENST00000381867 FAM110AQ9BQ89 295 aa10.59□□□□□ -0.71
SNPH-201ENST00000381867 TRBV10-1A0A0K0K1A3 114 aa10.59□□□□□ -0.71
SNPH-201ENST00000381867 ATP5EP2Q5VTU8 51 aa10.59□□□□□ -0.71
SNPH-201ENST00000381867 A0A0J9YX75 114 aa10.59□□□□□ -0.71
SNPH-201ENST00000381867 SDIM1Q6ZPB5 146 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 FANCD2OSQ96PS1 177 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 MLST8Q9BVC4 326 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 NOTCH2Q04721 2471 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
SNPH-201ENST00000381867 MBD6Q96DN6 1003 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 IGHV4-31P0DP07 118 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 RBX1P62877 108 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 CUL9Q8IWT3 2517 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 ACACBO00763 2458 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 UBE2AP49459 152 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 INSL3P51460 131 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 YPEL4Q96NS1 127 aa10.58□□□□□ -0.72
SNPH-201ENST00000381867 DYSFO75923 2080 aa10.57□□□□□ -0.72
SNPH-201ENST00000381867 BPY2O14599 106 aa10.57□□□□□ -0.72
SNPH-201ENST00000381867 TP73-AS1Q9UF72 201 aa10.57□□□□□ -0.72
SNPH-201ENST00000381867 TNRC6BQ9UPQ9 1833 aaKnown RBP10.57□□□□□ -0.72
SNPH-201ENST00000381867 DEFB4AO15263 64 aa10.56□□□□□ -0.72
SNPH-201ENST00000381867 P0DMU3 169 aa10.56□□□□□ -0.72
SNPH-201ENST00000381867 FAM231AP0DMU4 169 aa10.56□□□□□ -0.72
SNPH-201ENST00000381867 FAM231CP0DMU5 169 aa10.56□□□□□ -0.72
SNPH-201ENST00000381867 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
SNPH-201ENST00000381867 ZNF295-AS1Q8N0V1 137 aa10.56□□□□□ -0.72
SNPH-201ENST00000381867 TMEM263Q8WUH6 116 aaKnown RBP10.56□□□□□ -0.72
SNPH-201ENST00000381867 EBI3Q14213 229 aa10.55□□□□□ -0.72
SNPH-201ENST00000381867 Q6YL49 198 aa10.55□□□□□ -0.72
SNPH-201ENST00000381867 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
SNPH-201ENST00000381867 TMEM223A0PJW6 202 aa10.54□□□□□ -0.72
SNPH-201ENST00000381867 DNAJC9-AS1A6NH13 148 aa10.54□□□□□ -0.72
SNPH-201ENST00000381867 FREM1Q5H8C1 2179 aa10.54□□□□□ -0.72
SNPH-201ENST00000381867 KLK12Q9UKR0 248 aa10.54□□□□□ -0.72
SNPH-201ENST00000381867 C22orf34Q6ZV56 151 aa10.54□□□□□ -0.72
SNPH-201ENST00000381867 NCOA6Q14686 2063 aaPredicted RBP10.54□□□□□ -0.72
SNPH-201ENST00000381867 SPTSSBQ8NFR3 76 aa10.54□□□□□ -0.72
SNPH-201ENST00000381867 COL4A2P08572 1712 aa10.54□□□□□ -0.72
SNPH-201ENST00000381867 TRBV30A0A0K0K1B3 111 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 IGF1P05019 195 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 MPLKIPQ8TAP9 179 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 NDUFC2-KCTD14E9PQ53 114 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 FAM240AA0A1B0GVK7 77 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 H0Y9J4 135 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
SNPH-201ENST00000381867 TRIAP1O43715 76 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 MAPKAPK5-AS1Q8N8E1 139 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
SNPH-201ENST00000381867 MED12LQ86YW9 2145 aa10.52□□□□□ -0.72
SNPH-201ENST00000381867 BRWD1-AS2P59051 145 aa10.52□□□□□ -0.72
SNPH-201ENST00000381867 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.72
SNPH-201ENST00000381867 UFSP1Q6NVU6 142 aa10.52□□□□□ -0.73
SNPH-201ENST00000381867 CRIP3Q6Q6R5 217 aa10.52□□□□□ -0.73
SNPH-201ENST00000381867 PRO0255Q9UI72 69 aa10.52□□□□□ -0.73
SNPH-201ENST00000381867 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
SNPH-201ENST00000381867 CCDC140Q96MF4 163 aa10.51□□□□□ -0.73
SNPH-201ENST00000381867 U3KQK5 164 aa10.51□□□□□ -0.73
SNPH-201ENST00000381867 ATRXP46100 2492 aa10.51□□□□□ -0.73
SNPH-201ENST00000381867 SEC61GP60059 68 aa10.51□□□□□ -0.73
SNPH-201ENST00000381867 PLA2G2AP14555 144 aa10.51□□□□□ -0.73
SNPH-201ENST00000381867 ENHOQ6UWT2 76 aa10.51□□□□□ -0.73
SNPH-201ENST00000381867 Q6ZPA2 131 aa10.5□□□□□ -0.73
SNPH-201ENST00000381867 LINC00308Q8TCZ7 52 aa10.5□□□□□ -0.73
SNPH-201ENST00000381867 CDKN2A-AS1Q9UH64 79 aa10.5□□□□□ -0.73
SNPH-201ENST00000381867 HIVEP2P31629 2446 aa10.5□□□□□ -0.73
SNPH-201ENST00000381867 PLCE1Q9P212 2302 aa10.5□□□□□ -0.73
SNPH-201ENST00000381867 IGLV4-3A0A075B6K6 122 aa10.5□□□□□ -0.73
SNPH-201ENST00000381867 LY6LH3BQJ8 138 aa10.5□□□□□ -0.73
SNPH-201ENST00000381867 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
SNPH-201ENST00000381867 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
SNPH-201ENST00000381867 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
SNPH-201ENST00000381867 NDUFA7O95182 113 aa10.49□□□□□ -0.73
SNPH-201ENST00000381867 WFDC11Q8NEX6 87 aa10.48□□□□□ -0.73
SNPH-201ENST00000381867 IMUPQ9GZP8 106 aa10.48□□□□□ -0.73
SNPH-201ENST00000381867 INAFM1C9JVW0 142 aa10.48□□□□□ -0.73
SNPH-201ENST00000381867 EIF4EBP1Q13541 118 aaPredicted RBP10.48□□□□□ -0.73
SNPH-201ENST00000381867 ATP5EP56381 51 aaPredicted RBP10.47□□□□□ -0.73
SNPH-201ENST00000381867 ARHGAP21Q5T5U3 1957 aa10.47□□□□□ -0.73
SNPH-201ENST00000381867 IGKV4-1P06312 121 aa10.47□□□□□ -0.73
SNPH-201ENST00000381867 H7C423 109 aa10.47□□□□□ -0.73
SNPH-201ENST00000381867 C2orf91Q6ZV80 131 aa10.47□□□□□ -0.73
SNPH-201ENST00000381867 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
SNPH-201ENST00000381867 RNF185Q96GF1 192 aa10.47□□□□□ -0.73
SNPH-201ENST00000381867 SERP2Q8N6R1 65 aa10.47□□□□□ -0.73
SNPH-201ENST00000381867 SLPIP03973 132 aa10.46□□□□□ -0.73
SNPH-201ENST00000381867 A0A0U1RQV1 116 aa10.46□□□□□ -0.73
SNPH-201ENST00000381867 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.73
SNPH-201ENST00000381867 SCXQ7RTU7 201 aa10.46□□□□□ -0.74
SNPH-201ENST00000381867 B9D2Q9BPU9 175 aa10.46□□□□□ -0.74
SNPH-201ENST00000381867 CFAP126Q5VTH2 177 aa10.45□□□□□ -0.74
SNPH-201ENST00000381867 C11orf45Q8TAV5 145 aa10.45□□□□□ -0.74
SNPH-201ENST00000381867 PIK3CD-AS1Q5SR53 167 aa10.45□□□□□ -0.74
SNPH-201ENST00000381867 NDUFC1O43677 76 aa10.45□□□□□ -0.74
SNPH-201ENST00000381867 CRIP1P50238 77 aa10.45□□□□□ -0.74
SNPH-201ENST00000381867 REG3AQ06141 175 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms