RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ZNF295-AS1Q8N0V1 137 aa9.11□□□□□ -0.95
PCDHA9-201ENST00000378122 OXLD1Q5BKU9 147 aa9.1□□□□□ -0.95
PCDHA9-201ENST00000378122 MIAQ16674 131 aa9.1□□□□□ -0.95
PCDHA9-201ENST00000378122 MIR7-3HGQ8N6C7 128 aa9.1□□□□□ -0.95
PCDHA9-201ENST00000378122 TEX49A0A1B0GTD5 131 aa9.1□□□□□ -0.95
PCDHA9-201ENST00000378122 C1orf229Q6ZS94 237 aaPredicted RBP9.1□□□□□ -0.95
PCDHA9-201ENST00000378122 A0A1W2PNU3 283 aaPredicted RBP9.1□□□□□ -0.95
PCDHA9-201ENST00000378122 WISP2O76076 250 aa9.1□□□□□ -0.95
PCDHA9-201ENST00000378122 IGLV1-47P01700 117 aa9.1□□□□□ -0.95
PCDHA9-201ENST00000378122 CACNA1HO95180 2353 aa9.09□□□□□ -0.95
PCDHA9-201ENST00000378122 JMJD7-PLA2G4BH0Y9G9 81 aa9.09□□□□□ -0.95
PCDHA9-201ENST00000378122 IGHV4-30-4P0DP06 118 aa9.09□□□□□ -0.95
PCDHA9-201ENST00000378122 BRK1Q8WUW1 75 aa9.09□□□□□ -0.95
PCDHA9-201ENST00000378122 ALPK3Q96L96 1907 aa9.09□□□□□ -0.95
PCDHA9-201ENST00000378122 BRWD1-AS2P59051 145 aa9.09□□□□□ -0.95
PCDHA9-201ENST00000378122 PTPN13Q12923 2485 aa9.09□□□□□ -0.96
PCDHA9-201ENST00000378122 A0A0J9YXY3 114 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 H3BQ85 93 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 CRIP3Q6Q6R5 217 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 HIVEP2P31629 2446 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 PPDPFQ9H3Y8 114 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 TRAV23DV6A0A075B6W5 121 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 DSCAMO60469 2012 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 K7EMT4 169 aa9.08□□□□□ -0.96
PCDHA9-201ENST00000378122 TMEM256-PLSCR3K7ERE1 68 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 CRYGDP07320 174 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 MP68P56378 58 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 SDIM1Q6ZPB5 146 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 C7orf33Q8WU49 177 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 UPK3BQ9BT76 320 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 SIRPDQ9H106 197 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 LINC00643Q86TS7 51 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 CCDC140Q96MF4 163 aa9.07□□□□□ -0.96
PCDHA9-201ENST00000378122 C20orf203Q8NBC4 194 aa9.06□□□□□ -0.96
PCDHA9-201ENST00000378122 SORL1Q92673 2214 aa9.06□□□□□ -0.96
PCDHA9-201ENST00000378122 TET2Q6N021 2002 aaPredicted RBP9.06□□□□□ -0.96
PCDHA9-201ENST00000378122 MAPKAPK5-AS1Q8N8E1 139 aa9.06□□□□□ -0.96
PCDHA9-201ENST00000378122 NEXN-AS1Q8NBZ9 246 aa9.06□□□□□ -0.96
PCDHA9-201ENST00000378122 RBX1P62877 108 aa9.06□□□□□ -0.96
PCDHA9-201ENST00000378122 IGKV2D-26A0A0A0MRZ7 120 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 NDUFA1O15239 70 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 INSL3P51460 131 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 FAM19A5Q7Z5A7 132 aaPredicted RBP9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 C20orf173Q96LM9 149 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 C9orf85Q96MD7 179 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 BDP1A6H8Y1 2624 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 TECTAO75443 2155 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 PRR14LQ5THK1 2151 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 EIF4EBP1Q13541 118 aaPredicted RBP9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 DIRC1Q969H9 104 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 MBD6Q96DN6 1003 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 RETNLBQ9BQ08 111 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 KIAA1549Q9HCM3 1950 aa9.05□□□□□ -0.96
PCDHA9-201ENST00000378122 A0A0J9YX75 114 aa9.04□□□□□ -0.96
PCDHA9-201ENST00000378122 LINC01548A6NM66 108 aa9.04□□□□□ -0.96
PCDHA9-201ENST00000378122 UBE2D3P61077 147 aa9.04□□□□□ -0.96
PCDHA9-201ENST00000378122 CASC2Q6XLA1 102 aa9.04□□□□□ -0.96
PCDHA9-201ENST00000378122 SPG11Q96JI7 2443 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 IGLV2-11P01706 119 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 SPAG11BQ08648 103 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 NUPR2A6NF83 97 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 MAP6D1Q9H9H5 199 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 X6R8D5 127 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 NDUFB1O75438 58 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 MLST8Q9BVC4 326 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 MALRD1Q5VYJ5 2156 aa9.03□□□□□ -0.96
PCDHA9-201ENST00000378122 EXPH5Q8NEV8 1989 aa9.02□□□□□ -0.97
PCDHA9-201ENST00000378122 SONP18583 2426 aaKnown RBP9.02□□□□□ -0.97
PCDHA9-201ENST00000378122 A6NDX4 124 aa9.02□□□□□ -0.97
PCDHA9-201ENST00000378122 CXCL5P42830 114 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 CRIP1P50238 77 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 TMEM263Q8WUH6 116 aaKnown RBP9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 B9D2Q9BPU9 175 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 U3KQK5 164 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 UQCRQO14949 82 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 SEC61GP60059 68 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 LINC00467Q9BRT7 94 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 LTBP2Q14767 1821 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 SLPIP03973 132 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 FAM19A1Q7Z5A9 133 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 ODF3BA8MYP8 253 aa9.01□□□□□ -0.97
PCDHA9-201ENST00000378122 TRIAP1O43715 76 aa9□□□□□ -0.97
PCDHA9-201ENST00000378122 C14orf177Q52M58 125 aa9□□□□□ -0.97
PCDHA9-201ENST00000378122 RNF185Q96GF1 192 aa9□□□□□ -0.97
PCDHA9-201ENST00000378122 FSHBP01225 129 aa9□□□□□ -0.97
PCDHA9-201ENST00000378122 LINC00526Q96FQ7 95 aa9□□□□□ -0.97
PCDHA9-201ENST00000378122 SPRY4Q9C004 299 aa9□□□□□ -0.97
PCDHA9-201ENST00000378122 IGLV9-49A0A0B4J1Y8 123 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 COX7BP24311 80 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 NOTCH2Q04721 2471 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 KRTAP10-9P60411 292 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 ZFAND2AQ8N6M9 145 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 ENHOQ6UWT2 76 aa8.99□□□□□ -0.97
PCDHA9-201ENST00000378122 C2orf91Q6ZV80 131 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms