RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 LITAFQ99732 161 aa9.65□□□□□ -0.86
ACTN1-202ENST00000376839 TIMM21Q9BVV7 248 aa9.65□□□□□ -0.86
ACTN1-202ENST00000376839 ZNF702PQ9H963 129 aa9.65□□□□□ -0.86
ACTN1-202ENST00000376839 PYGO1Q9Y3Y4 419 aa9.65□□□□□ -0.86
ACTN1-202ENST00000376839 SLC25A20O43772 301 aa9.65□□□□□ -0.86
ACTN1-202ENST00000376839 SPINK8P0C7L1 97 aa9.65□□□□□ -0.86
ACTN1-202ENST00000376839 MRPS36P82909 103 aaKnown RBP9.65□□□□□ -0.86
ACTN1-202ENST00000376839 A0A1B0GV72 72 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 CRYBA4P53673 196 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 PIEZO1Q92508 2521 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 A0A096LNT2 108 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 A8MZ25 164 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 UBE2E2Q96LR5 201 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 EDA2RQ9HAV5 297 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 TNFRSF18Q9Y5U5 241 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 CKS1BP61024 79 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 Q1RN00 199 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 DUX3Q96PT4 197 aa9.64□□□□□ -0.87
ACTN1-202ENST00000376839 H3BMM0 161 aa9.63□□□□□ -0.87
ACTN1-202ENST00000376839 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
ACTN1-202ENST00000376839 BEX4Q9NWD9 120 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-202ENST00000376839 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-202ENST00000376839 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-202ENST00000376839 CHCHD7Q9BUK0 85 aa9.63□□□□□ -0.87
ACTN1-202ENST00000376839 ACACBO00763 2458 aa9.62□□□□□ -0.87
ACTN1-202ENST00000376839 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-202ENST00000376839 IGHV1-58A0A0C4DH39 117 aa9.62□□□□□ -0.87
ACTN1-202ENST00000376839 PRSS2P07478 247 aa9.62□□□□□ -0.87
ACTN1-202ENST00000376839 HIST2H2BDQ6DRA6 164 aa9.62□□□□□ -0.87
ACTN1-202ENST00000376839 CUBNO60494 3623 aa9.62□□□□□ -0.87
ACTN1-202ENST00000376839 MYO9AB2RTY4 2548 aa9.62□□□□□ -0.87
ACTN1-202ENST00000376839 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
ACTN1-202ENST00000376839 DSCR9P59020 149 aa9.61□□□□□ -0.87
ACTN1-202ENST00000376839 NDUFA12Q9UI09 145 aa9.61□□□□□ -0.87
ACTN1-202ENST00000376839 UBE2D4Q9Y2X8 147 aa9.61□□□□□ -0.87
ACTN1-202ENST00000376839 CACNA1AO00555 2505 aa9.61□□□□□ -0.87
ACTN1-202ENST00000376839 TRIAP1O43715 76 aa9.61□□□□□ -0.87
ACTN1-202ENST00000376839 NPC2P61916 151 aa9.61□□□□□ -0.87
ACTN1-202ENST00000376839 TMEM61Q8N0U2 210 aa9.61□□□□□ -0.87
ACTN1-202ENST00000376839 A8MTW9 85 aa9.6□□□□□ -0.87
ACTN1-202ENST00000376839 Q5PR19 223 aa9.6□□□□□ -0.87
ACTN1-202ENST00000376839 LINC00467Q9BRT7 94 aa9.6□□□□□ -0.87
ACTN1-202ENST00000376839 Q6YL49 198 aa9.6□□□□□ -0.87
ACTN1-202ENST00000376839 Q6ZSV7 163 aa9.6□□□□□ -0.87
ACTN1-202ENST00000376839 VSIG2Q96IQ7 327 aa9.6□□□□□ -0.87
ACTN1-202ENST00000376839 FAM208BQ5VWN6 2430 aa9.6□□□□□ -0.87
ACTN1-202ENST00000376839 TINCRA0A1B0GVN0 87 aa9.59□□□□□ -0.87
ACTN1-202ENST00000376839 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
ACTN1-202ENST00000376839 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
ACTN1-202ENST00000376839 J3QLI3 93 aa9.59□□□□□ -0.87
ACTN1-202ENST00000376839 ATXN8Q156A1 80 aa9.59□□□□□ -0.87
ACTN1-202ENST00000376839 NTN5Q8WTR8 489 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-202ENST00000376839 C11orf72Q8NBR9 251 aa9.58□□□□□ -0.88
ACTN1-202ENST00000376839 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
ACTN1-202ENST00000376839 TEX15Q9BXT5 2789 aa9.58□□□□□ -0.88
ACTN1-202ENST00000376839 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
ACTN1-202ENST00000376839 M0QXV9 152 aa9.58□□□□□ -0.88
ACTN1-202ENST00000376839 SPANXDQ9BXN6 97 aa9.58□□□□□ -0.88
ACTN1-202ENST00000376839 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
ACTN1-202ENST00000376839 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
ACTN1-202ENST00000376839 AKAP9Q99996 3911 aa9.58□□□□□ -0.88
ACTN1-202ENST00000376839 FSHBP01225 129 aa9.57□□□□□ -0.88
ACTN1-202ENST00000376839 MIAQ16674 131 aa9.57□□□□□ -0.88
ACTN1-202ENST00000376839 LINC01587Q99440 93 aa9.57□□□□□ -0.88
ACTN1-202ENST00000376839 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
ACTN1-202ENST00000376839 PTPN13Q12923 2485 aa9.57□□□□□ -0.88
ACTN1-202ENST00000376839 DAND5Q8N907 189 aa9.56□□□□□ -0.88
ACTN1-202ENST00000376839 CDKN2A-AS1Q9UH64 79 aa9.56□□□□□ -0.88
ACTN1-202ENST00000376839 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
ACTN1-202ENST00000376839 LRRK2Q5S007 2527 aa9.56□□□□□ -0.88
ACTN1-202ENST00000376839 IGHV3-53P01767 116 aa9.56□□□□□ -0.88
ACTN1-202ENST00000376839 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.56□□□□□ -0.88
ACTN1-202ENST00000376839 TEX49A0A1B0GTD5 131 aa9.55□□□□□ -0.88
ACTN1-202ENST00000376839 KHDC1LQ5JSQ8 128 aa9.55□□□□□ -0.88
ACTN1-202ENST00000376839 PIK3CD-AS1Q5SR53 167 aa9.55□□□□□ -0.88
ACTN1-202ENST00000376839 ZFAND6Q6FIF0 208 aa9.55□□□□□ -0.88
ACTN1-202ENST00000376839 ABCA12Q86UK0 2595 aa9.55□□□□□ -0.88
ACTN1-202ENST00000376839 ZFYVE26Q68DK2 2539 aa9.55□□□□□ -0.88
ACTN1-202ENST00000376839 IGHV4-31P0DP07 118 aa9.55□□□□□ -0.88
ACTN1-202ENST00000376839 CHD6Q8TD26 2715 aa9.54□□□□□ -0.88
ACTN1-202ENST00000376839 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
ACTN1-202ENST00000376839 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
ACTN1-202ENST00000376839 TRAV26-1A0A087WT03 109 aa9.54□□□□□ -0.88
ACTN1-202ENST00000376839 DYNLRB2Q8TF09 96 aa9.54□□□□□ -0.88
ACTN1-202ENST00000376839 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
ACTN1-202ENST00000376839 ZNF469Q96JG9 3925 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-202ENST00000376839 TLN2Q9Y4G6 2542 aa9.54□□□□□ -0.88
ACTN1-202ENST00000376839 CR1P17927 2039 aa9.53□□□□□ -0.88
ACTN1-202ENST00000376839 COX6A2Q02221 97 aa9.53□□□□□ -0.88
ACTN1-202ENST00000376839 BEAN1Q3B7T3 259 aa9.53□□□□□ -0.88
ACTN1-202ENST00000376839 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
ACTN1-202ENST00000376839 PEMTQ9UBM1 199 aa9.53□□□□□ -0.88
ACTN1-202ENST00000376839 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
ACTN1-202ENST00000376839 RS1O15537 224 aa9.52□□□□□ -0.88
ACTN1-202ENST00000376839 INSP01308 110 aa9.52□□□□□ -0.88
ACTN1-202ENST00000376839 TMEM101Q96IK0 257 aa9.52□□□□□ -0.88
ACTN1-202ENST00000376839 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.88
ACTN1-202ENST00000376839 H7C423 109 aa9.52□□□□□ -0.89
ACTN1-202ENST00000376839 DEFB114Q30KQ6 69 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms