RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 NRGNQ92686 78 aa12.66□□□□□ -0.38
VARS-215ENST00000375663 Q96MF0 132 aa12.66□□□□□ -0.38
VARS-215ENST00000375663 LAMA1P25391 3075 aa12.65□□□□□ -0.38
VARS-215ENST00000375663 A0A0J9YXY3 114 aa12.65□□□□□ -0.38
VARS-215ENST00000375663 VSIG2Q96IQ7 327 aa12.65□□□□□ -0.38
VARS-215ENST00000375663 AGRNO00468 2067 aa12.65□□□□□ -0.38
VARS-215ENST00000375663 RNF152Q8N8N0 203 aa12.65□□□□□ -0.38
VARS-215ENST00000375663 SPANXDQ9BXN6 97 aa12.65□□□□□ -0.38
VARS-215ENST00000375663 TINCRA0A1B0GVN0 87 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 ACYP1P07311 99 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 P0DMU3 169 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 FAM231AP0DMU4 169 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 FAM231CP0DMU5 169 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 C5orf38Q86SI9 138 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 ADAMTS20P59510 1910 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 LGALS9O00182 355 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 Q6ZQT7 251 aa12.64□□□□□ -0.39
VARS-215ENST00000375663 A0A0B4J2C4 111 aa12.63□□□□□ -0.39
VARS-215ENST00000375663 ZNF22P17026 224 aaPredicted RBP12.63□□□□□ -0.39
VARS-215ENST00000375663 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
VARS-215ENST00000375663 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
VARS-215ENST00000375663 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
VARS-215ENST00000375663 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
VARS-215ENST00000375663 RNASE3P12724 160 aaKnown RBP12.62□□□□□ -0.39
VARS-215ENST00000375663 C11orf71Q6IPW1 123 aa12.62□□□□□ -0.39
VARS-215ENST00000375663 CLPSL2Q6UWE3 100 aa12.61□□□□□ -0.39
VARS-215ENST00000375663 XCL1P47992 114 aa12.61□□□□□ -0.39
VARS-215ENST00000375663 UBL5Q9BZL1 73 aa12.61□□□□□ -0.39
VARS-215ENST00000375663 CLPSL1A2RUU4 121 aa12.61□□□□□ -0.39
VARS-215ENST00000375663 DEFB121Q5J5C9 76 aa12.61□□□□□ -0.39
VARS-215ENST00000375663 IGLV4-3A0A075B6K6 122 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 A0A096LPF7 62 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 INSL3P51460 131 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 MIAQ16674 131 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 NFE4Q86UQ8 179 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 RNF183Q96D59 192 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 K7EQG2 157 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 M0QY20 66 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 DAZ2Q13117 558 aaKnown RBP12.6□□□□□ -0.39
VARS-215ENST00000375663 DAZ4Q86SG3 579 aaKnown RBP12.6□□□□□ -0.39
VARS-215ENST00000375663 DAZ3Q9NR90 486 aaKnown RBP12.6□□□□□ -0.39
VARS-215ENST00000375663 TRBV27A0A0K0K1C4 114 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 K7EQD1 137 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 SMIM20Q8N5G0 67 aa12.6□□□□□ -0.39
VARS-215ENST00000375663 TMEM89A2RUT3 159 aa12.59□□□□□ -0.39
VARS-215ENST00000375663 CCL24O00175 119 aa12.59□□□□□ -0.39
VARS-215ENST00000375663 IGHV3-33P01772 117 aa12.59□□□□□ -0.39
VARS-215ENST00000375663 FAM236AA0A1B0GUQ0 79 aa12.59□□□□□ -0.39
VARS-215ENST00000375663 FAM236BA0A1B0GV22 79 aa12.59□□□□□ -0.39
VARS-215ENST00000375663 TMEM223A0PJW6 202 aa12.59□□□□□ -0.39
VARS-215ENST00000375663 TEX49A0A1B0GTD5 131 aa12.59□□□□□ -0.39
VARS-215ENST00000375663 F8W735 103 aaPredicted RBP12.59□□□□□ -0.39
VARS-215ENST00000375663 MRGPRG-AS1Q2M3A8 158 aa12.59□□□□□ -0.39
VARS-215ENST00000375663 CFAP126Q5VTH2 177 aa12.58□□□□□ -0.39
VARS-215ENST00000375663 ODF3Q96PU9 254 aa12.58□□□□□ -0.39
VARS-215ENST00000375663 EYSQ5T1H1 3165 aa12.58□□□□□ -0.4
VARS-215ENST00000375663 POLR2KP53803 58 aaKnown RBP12.57□□□□□ -0.4
VARS-215ENST00000375663 HAMPP81172 84 aa12.57□□□□□ -0.4
VARS-215ENST00000375663 COX8CQ7Z4L0 72 aa12.57□□□□□ -0.4
VARS-215ENST00000375663 ZMAT4Q9H898 229 aa12.57□□□□□ -0.4
VARS-215ENST00000375663 CRLF1O75462 422 aa12.57□□□□□ -0.4
VARS-215ENST00000375663 CDKN2A-AS1Q9UH64 79 aa12.57□□□□□ -0.4
VARS-215ENST00000375663 F5H768 121 aa12.56□□□□□ -0.4
VARS-215ENST00000375663 IGHV3-30P01768 117 aa12.56□□□□□ -0.4
VARS-215ENST00000375663 ANGP03950 147 aaKnown RBP12.56□□□□□ -0.4
VARS-215ENST00000375663 IGHV3-30-5P0DP03 117 aa12.56□□□□□ -0.4
VARS-215ENST00000375663 REV3LO60673 3130 aa12.56□□□□□ -0.4
VARS-215ENST00000375663 Q6ZS46 218 aa12.56□□□□□ -0.4
VARS-215ENST00000375663 TRBV6-5A0A0K0K1A5 114 aa12.56□□□□□ -0.4
VARS-215ENST00000375663 H0YGX0 51 aa12.56□□□□□ -0.4
VARS-215ENST00000375663 DAD1P61803 113 aa12.56□□□□□ -0.4
VARS-215ENST00000375663 COX7B2Q8TF08 81 aa12.55□□□□□ -0.4
VARS-215ENST00000375663 TRAV4A0A0B4J268 109 aa12.55□□□□□ -0.4
VARS-215ENST00000375663 RPL32P62910 135 aaKnown RBP12.55□□□□□ -0.4
VARS-215ENST00000375663 C19orf84I3L1E1 186 aa12.54□□□□□ -0.4
VARS-215ENST00000375663 SPATA25Q9BR10 227 aa12.54□□□□□ -0.4
VARS-215ENST00000375663 ORMDL1Q9P0S3 153 aa12.54□□□□□ -0.4
VARS-215ENST00000375663 TRIAP1O43715 76 aa12.54□□□□□ -0.4
VARS-215ENST00000375663 C3orf56Q8N813 242 aa12.53□□□□□ -0.4
VARS-215ENST00000375663 TRACP01848 142 aa12.53□□□□□ -0.4
VARS-215ENST00000375663 PTPRBP23467 1997 aa12.53□□□□□ -0.4
VARS-215ENST00000375663 KLLNB2CW77 178 aa12.53□□□□□ -0.4
VARS-215ENST00000375663 MIR7-3HGQ8N6C7 128 aa12.53□□□□□ -0.4
VARS-215ENST00000375663 LINC00467Q9BRT7 94 aa12.53□□□□□ -0.4
VARS-215ENST00000375663 NDUFV3P56181 108 aaKnown RBP12.52□□□□□ -0.41
VARS-215ENST00000375663 CDSNQ15517 529 aa12.52□□□□□ -0.41
VARS-215ENST00000375663 IGKV3D-7A0A0C4DH55 119 aa12.51□□□□□ -0.41
VARS-215ENST00000375663 C10orf99Q6UWK7 81 aa12.51□□□□□ -0.41
VARS-215ENST00000375663 COL4A2P08572 1712 aa12.51□□□□□ -0.41
VARS-215ENST00000375663 PROK1P58294 105 aa12.51□□□□□ -0.41
VARS-215ENST00000375663 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
VARS-215ENST00000375663 PSMG3-AS1Q96PY0 264 aa12.51□□□□□ -0.41
VARS-215ENST00000375663 HIST2H2BCQ6DN03 193 aa12.51□□□□□ -0.41
VARS-215ENST00000375663 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
VARS-215ENST00000375663 MYO15AQ9UKN7 3530 aa12.5□□□□□ -0.41
VARS-215ENST00000375663 LECT2O14960 151 aa12.5□□□□□ -0.41
VARS-215ENST00000375663 RAI1Q7Z5J4 1906 aaPredicted RBP12.5□□□□□ -0.41
VARS-215ENST00000375663 TRBV10-1A0A0K0K1A3 114 aa12.5□□□□□ -0.41
VARS-215ENST00000375663 TRBV30A0A0K0K1B3 111 aa12.5□□□□□ -0.41
VARS-215ENST00000375663 TMEM126AQ9H061 195 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms