RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 LAMTOR3Q9UHA4 124 aa13.41□□□□□ -0.26
PTPDC1-202ENST00000375360 PTPRBP23467 1997 aa13.41□□□□□ -0.26
PTPDC1-202ENST00000375360 HILS1P60008 231 aa13.4□□□□□ -0.26
PTPDC1-202ENST00000375360 LAMA1P25391 3075 aa13.4□□□□□ -0.26
PTPDC1-202ENST00000375360 C11orf86A6NJI1 115 aa13.4□□□□□ -0.26
PTPDC1-202ENST00000375360 VSIG2Q96IQ7 327 aa13.4□□□□□ -0.26
PTPDC1-202ENST00000375360 PRO1854Q9UHT4 67 aa13.4□□□□□ -0.26
PTPDC1-202ENST00000375360 PROK1P58294 105 aa13.39□□□□□ -0.27
PTPDC1-202ENST00000375360 C20orf203Q8NBC4 194 aa13.39□□□□□ -0.27
PTPDC1-202ENST00000375360 ETDBQ3ZM63 59 aa13.39□□□□□ -0.27
PTPDC1-202ENST00000375360 MRPL52Q86TS9 123 aaKnown RBP13.39□□□□□ -0.27
PTPDC1-202ENST00000375360 F8W735 103 aaPredicted RBP13.39□□□□□ -0.27
PTPDC1-202ENST00000375360 ODF1Q14990 250 aa13.39□□□□□ -0.27
PTPDC1-202ENST00000375360 C9orf118A6NHY6 69 aa13.38□□□□□ -0.27
PTPDC1-202ENST00000375360 NPSP0C0P6 89 aa13.38□□□□□ -0.27
PTPDC1-202ENST00000375360 ICOSQ9Y6W8 199 aa13.38□□□□□ -0.27
PTPDC1-202ENST00000375360 TET2Q6N021 2002 aaPredicted RBP13.38□□□□□ -0.27
PTPDC1-202ENST00000375360 FAM222AQ5U5X8 452 aa13.38□□□□□ -0.27
PTPDC1-202ENST00000375360 DAND5Q8N907 189 aa13.38□□□□□ -0.27
PTPDC1-202ENST00000375360 VCANP13611 3396 aa13.38□□□□□ -0.27
PTPDC1-202ENST00000375360 EDA2RQ9HAV5 297 aa13.38□□□□□ -0.27
PTPDC1-202ENST00000375360 CELSR3Q9NYQ7 3312 aa13.37□□□□□ -0.27
PTPDC1-202ENST00000375360 TOMM6Q96B49 74 aa13.37□□□□□ -0.27
PTPDC1-202ENST00000375360 YPEL4Q96NS1 127 aa13.37□□□□□ -0.27
PTPDC1-202ENST00000375360 AGRNO00468 2067 aa13.37□□□□□ -0.27
PTPDC1-202ENST00000375360 PRO0255Q9UI72 69 aa13.37□□□□□ -0.27
PTPDC1-202ENST00000375360 H3BMG7 143 aa13.36□□□□□ -0.27
PTPDC1-202ENST00000375360 C12orf74Q32Q52 190 aa13.36□□□□□ -0.27
PTPDC1-202ENST00000375360 C10orf126Q8N4M7 172 aa13.36□□□□□ -0.27
PTPDC1-202ENST00000375360 DCANP1Q8TF63 244 aa13.36□□□□□ -0.27
PTPDC1-202ENST00000375360 C1orf43Q9BWL3 253 aa13.36□□□□□ -0.27
PTPDC1-202ENST00000375360 KLK12Q9UKR0 248 aa13.36□□□□□ -0.27
PTPDC1-202ENST00000375360 BOD1L2Q8IYS8 172 aa13.35□□□□□ -0.27
PTPDC1-202ENST00000375360 FAM110AQ9BQ89 295 aa13.35□□□□□ -0.27
PTPDC1-202ENST00000375360 SLC25A29Q8N8R3 303 aa13.35□□□□□ -0.27
PTPDC1-202ENST00000375360 GAS8-AS1O95177 125 aa13.34□□□□□ -0.27
PTPDC1-202ENST00000375360 GHRHP01286 108 aa13.34□□□□□ -0.27
PTPDC1-202ENST00000375360 ODF3Q96PU9 254 aa13.34□□□□□ -0.27
PTPDC1-202ENST00000375360 TIMM17AQ99595 171 aa13.34□□□□□ -0.27
PTPDC1-202ENST00000375360 FLNAP21333 2647 aaKnown RBP13.34□□□□□ -0.27
PTPDC1-202ENST00000375360 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.34□□□□□ -0.27
PTPDC1-202ENST00000375360 MRGPRG-AS1Q2M3A8 158 aa13.34□□□□□ -0.27
PTPDC1-202ENST00000375360 TP73-AS1Q9UF72 201 aa13.34□□□□□ -0.27
PTPDC1-202ENST00000375360 TRAV26-1A0A087WT03 109 aa13.33□□□□□ -0.27
PTPDC1-202ENST00000375360 RNASE3P12724 160 aaKnown RBP13.33□□□□□ -0.27
PTPDC1-202ENST00000375360 TRAV8-4A0A0B4J246 113 aa13.33□□□□□ -0.28
PTPDC1-202ENST00000375360 SIVA1O15304 175 aa13.33□□□□□ -0.28
PTPDC1-202ENST00000375360 Q6ZUT4 128 aa13.33□□□□□ -0.28
PTPDC1-202ENST00000375360 SCRT2Q9NQ03 307 aa13.33□□□□□ -0.28
PTPDC1-202ENST00000375360 ITPR3Q14573 2671 aa13.33□□□□□ -0.28
PTPDC1-202ENST00000375360 MRPS12O15235 138 aaKnown RBP13.32□□□□□ -0.28
PTPDC1-202ENST00000375360 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
PTPDC1-202ENST00000375360 CCL18P55774 89 aa13.32□□□□□ -0.28
PTPDC1-202ENST00000375360 FXYD2P54710 66 aa13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 RNF185Q96GF1 192 aa13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 NKAPP1Q8N9T2 125 aa13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 TNRC6BQ9UPQ9 1833 aaKnown RBP13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 A0A1W2PPM0 123 aa13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 CCL25O15444 150 aa13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 TAL2Q16559 108 aa13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 TRBV10-1A0A0K0K1A3 114 aa13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 LURAP1LQ8IV03 231 aa13.31□□□□□ -0.28
PTPDC1-202ENST00000375360 A4D1N5 150 aa13.3□□□□□ -0.28
PTPDC1-202ENST00000375360 COX7A2LO14548 114 aa13.3□□□□□ -0.28
PTPDC1-202ENST00000375360 COL6A3P12111 3177 aa13.3□□□□□ -0.28
PTPDC1-202ENST00000375360 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
PTPDC1-202ENST00000375360 OCIAD2Q56VL3 154 aa13.29□□□□□ -0.28
PTPDC1-202ENST00000375360 MUSTN1Q8IVN3 82 aa13.29□□□□□ -0.28
PTPDC1-202ENST00000375360 OXLD1Q5BKU9 147 aa13.29□□□□□ -0.28
PTPDC1-202ENST00000375360 PRB2P02812 416 aaPredicted RBP13.29□□□□□ -0.28
PTPDC1-202ENST00000375360 KLLNB2CW77 178 aa13.28□□□□□ -0.28
PTPDC1-202ENST00000375360 IGLL5B9A064 214 aa13.28□□□□□ -0.28
PTPDC1-202ENST00000375360 M0QY20 66 aa13.28□□□□□ -0.28
PTPDC1-202ENST00000375360 TRBV20-1A0A075B6N2 111 aa13.27□□□□□ -0.28
PTPDC1-202ENST00000375360 E9PLD3 99 aa13.27□□□□□ -0.28
PTPDC1-202ENST00000375360 CFC1BP0CG36 223 aa13.27□□□□□ -0.28
PTPDC1-202ENST00000375360 CFC1P0CG37 223 aa13.27□□□□□ -0.28
PTPDC1-202ENST00000375360 CFAP126Q5VTH2 177 aa13.27□□□□□ -0.28
PTPDC1-202ENST00000375360 CAMK2N2Q96S95 79 aa13.27□□□□□ -0.28
PTPDC1-202ENST00000375360 LINC00467Q9BRT7 94 aa13.27□□□□□ -0.28
PTPDC1-202ENST00000375360 GTSF1LQ9H1H1 148 aa13.27□□□□□ -0.28
PTPDC1-202ENST00000375360 GAGE2EQ4V326 116 aa13.27□□□□□ -0.29
PTPDC1-202ENST00000375360 GAGE2DQ9UEU5 116 aa13.27□□□□□ -0.29
PTPDC1-202ENST00000375360 SIGMAR1Q99720 223 aa13.26□□□□□ -0.29
PTPDC1-202ENST00000375360 TEX48A0A1B0GUV7 120 aa13.26□□□□□ -0.29
PTPDC1-202ENST00000375360 ODF3L2Q3SX64 289 aa13.26□□□□□ -0.29
PTPDC1-202ENST00000375360 Q8N976 141 aa13.26□□□□□ -0.29
PTPDC1-202ENST00000375360 RMI2Q96E14 147 aa13.26□□□□□ -0.29
PTPDC1-202ENST00000375360 AKAP13Q12802 2813 aa13.25□□□□□ -0.29
PTPDC1-202ENST00000375360 GAGE2AQ6NT46 116 aa13.25□□□□□ -0.29
PTPDC1-202ENST00000375360 NEXN-AS1Q8NBZ9 246 aa13.25□□□□□ -0.29
PTPDC1-202ENST00000375360 K7EP13 123 aa13.25□□□□□ -0.29
PTPDC1-202ENST00000375360 K7EP34 96 aa13.24□□□□□ -0.29
PTPDC1-202ENST00000375360 C11orf45Q8TAV5 145 aa13.24□□□□□ -0.29
PTPDC1-202ENST00000375360 SPATA12Q7Z6I5 190 aa13.24□□□□□ -0.29
PTPDC1-202ENST00000375360 COX7B2Q8TF08 81 aa13.24□□□□□ -0.29
PTPDC1-202ENST00000375360 SHISA2Q6UWI4 295 aa13.23□□□□□ -0.29
PTPDC1-202ENST00000375360 SH2D6Q7Z4S9 175 aa13.23□□□□□ -0.29
PTPDC1-202ENST00000375360 SND1-IT1Q9HBX3 110 aa13.23□□□□□ -0.29
PTPDC1-202ENST00000375360 DNAH14Q0VDD8 3507 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms