RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 A0A0J9YW62 118 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 TMEM223A0PJW6 202 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 COLCA2A8K830 154 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 ZNF736B4DX44 427 aaPredicted RBP1.54□□□□□ -2.16
CCDC7-204ENST00000375025 K7EP34 96 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 SH2D1AO60880 128 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 CD3DP04234 171 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 CRISP3P54108 245 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 NPC2P61916 151 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 BLCAPP62952 87 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 PATE2Q6UY27 113 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 ATP11AUNQ6ZP68 121 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 NTM-AS1Q6ZSK4 140 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 NDUFA11Q86Y39 141 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 Q8N2B8 174 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 CNEP1R1Q8N9A8 125 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 LINC01006Q8NI28 216 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 UQCR10Q9UDW1 63 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 MUC2Q02817 5179 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 PIGBOS1A0A0B4J2F0 54 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 C7orf66A4D0T2 115 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 PINLYPA6NC86 204 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 PDCD5O14737 125 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 SLC25A20O43772 301 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 COX7CP15954 63 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 SPINT3P49223 89 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 CMC4P56277 68 aaPredicted RBP1.54□□□□□ -2.16
CCDC7-204ENST00000375025 LYZL2Q7Z4W2 148 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 SMCR5Q8TEV8 140 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 NPVFQ9HCQ7 196 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 TMEM242Q9NWH2 141 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 MALRD1Q5VYJ5 2156 aa1.54□□□□□ -2.16
CCDC7-204ENST00000375025 IGKV3D-11A0A0A0MRZ8 115 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 A6NDX4 124 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 SNCGO76070 127 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 CPSF4O95639 269 aaKnown RBP1.53□□□□□ -2.16
CCDC7-204ENST00000375025 MPV17P39210 176 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 KHDC3LQ587J8 217 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 SPRNQ5BIV9 151 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 Q8N9W7 124 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 OR2T35Q8NGX2 323 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 VSTM2AQ8TAG5 236 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 TSKUQ8WUA8 353 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 C16orf74Q96GX8 76 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 VGLL1Q99990 258 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 MUC21A0A0G2JKD1 596 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 K7ERJ3 54 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 OR1I1O60431 355 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 EDF1O60869 148 aaKnown RBP1.53□□□□□ -2.16
CCDC7-204ENST00000375025 IGKV1-16P04430 117 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 P0C879 139 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 ZNF705BP0CI00 300 aaPredicted RBP1.53□□□□□ -2.16
CCDC7-204ENST00000375025 PCBD1P61457 104 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 HMGN3Q15651 99 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 GFI1BQ5VTD9 330 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 MIC13Q5XKP0 118 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 DPPA3Q6W0C5 159 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 ZFP2Q6ZN57 461 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 SBSPONQ8IVN8 264 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 KLHL30-AS1Q8NEE0 82 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 GABARAPL1Q9H0R8 117 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 PKD1P98161 4303 aa1.53□□□□□ -2.16
CCDC7-204ENST00000375025 IGHV3-64DA0A0J9YX35 117 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 IGLC7A0M8Q6 106 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 E7EQL1 145 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 C17orf112F2Z3M2 114 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 LECT2O14960 151 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 CYB5AP00167 134 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 MT-ATP8P03928 68 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 T-ENOLP0DO92 83 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 POLR2JP52435 117 aaKnown RBP1.53□□□□□ -2.17
CCDC7-204ENST00000375025 FOXF1Q12946 379 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 ZNF791Q3KP31 576 aaPredicted RBP1.53□□□□□ -2.17
CCDC7-204ENST00000375025 C5orf38Q86SI9 138 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 MRPS24Q96EL2 167 aaKnown RBP1.53□□□□□ -2.17
CCDC7-204ENST00000375025 LINC00479Q96M42 142 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 DEFB126Q9BYW3 111 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 BPESC1Q9GZL8 116 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 PROK2Q9HC23 129 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 LY96Q9Y6Y9 160 aa1.53□□□□□ -2.17
CCDC7-204ENST00000375025 MDC1Q14676 2089 aaKnown RBP1.52□□□□□ -2.17
CCDC7-204ENST00000375025 TET2Q6N021 2002 aaPredicted RBP1.52□□□□□ -2.17
CCDC7-204ENST00000375025 CSMD3Q7Z407 3707 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 IGHV3-73A0A0B4J1V6 119 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 TRAV2A0A0B4J234 112 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 IGKV3D-20A0A0C4DH25 116 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 OOSP1A8MZH6 123 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 APOC3P02656 99 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 TLX1NBP0CAT3 122 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 CGB3P0DN86 165 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 CGB7P0DN87 165 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 COL8A2P25067 703 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 FXYD2P54710 66 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 KRTAP10-12P60413 245 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 IL17AQ16552 155 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 HIGD2BQ4VC39 106 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 Q5BKY6 102 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 ZNF660Q6AZW8 331 aaPredicted RBP1.52□□□□□ -2.17
CCDC7-204ENST00000375025 Q8N976 141 aa1.52□□□□□ -2.17
CCDC7-204ENST00000375025 SPANXA2-OT1Q8N9U9 137 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms