RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ZNF415Q09FC8 603 aa17.28■□□□□ 0.36
CDK9-201ENST00000373264 C2CD3Q4AC94 2353 aa17.27■□□□□ 0.36
CDK9-201ENST00000373264 ZNF22P17026 224 aaPredicted RBP17.27■□□□□ 0.36
CDK9-201ENST00000373264 CITED2Q99967 270 aaPredicted RBP17.27■□□□□ 0.36
CDK9-201ENST00000373264 TNFRSF18Q9Y5U5 241 aa17.27■□□□□ 0.36
CDK9-201ENST00000373264 NFE4Q86UQ8 179 aa17.27■□□□□ 0.35
CDK9-201ENST00000373264 VCX2Q9H322 139 aa17.27■□□□□ 0.35
CDK9-201ENST00000373264 PGPEP1Q9NXJ5 209 aa17.27■□□□□ 0.35
CDK9-201ENST00000373264 TRAV2A0A0B4J234 112 aa17.26■□□□□ 0.35
CDK9-201ENST00000373264 APOMO95445 188 aa17.26■□□□□ 0.35
CDK9-201ENST00000373264 K7ERU9 68 aa17.26■□□□□ 0.35
CDK9-201ENST00000373264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.25■□□□□ 0.35
CDK9-201ENST00000373264 TMEM223A0PJW6 202 aa17.25■□□□□ 0.35
CDK9-201ENST00000373264 IGKV2-29A2NJV5 120 aaPredicted RBP17.25■□□□□ 0.35
CDK9-201ENST00000373264 WFDC2Q14508 124 aa17.25■□□□□ 0.35
CDK9-201ENST00000373264 A8MWV9 139 aa17.25■□□□□ 0.35
CDK9-201ENST00000373264 CCL24O00175 119 aa17.25■□□□□ 0.35
CDK9-201ENST00000373264 INSP01308 110 aa17.24■□□□□ 0.35
CDK9-201ENST00000373264 KRTAP1-1Q07627 177 aa17.24■□□□□ 0.35
CDK9-201ENST00000373264 ADARB2-AS1A8MUL3 147 aa17.24■□□□□ 0.35
CDK9-201ENST00000373264 RHODO00212 210 aa17.24■□□□□ 0.35
CDK9-201ENST00000373264 RPL24P83731 157 aaKnown RBP17.23■□□□□ 0.35
CDK9-201ENST00000373264 C1orf158Q8N1D5 194 aa17.23■□□□□ 0.35
CDK9-201ENST00000373264 LGALS3P17931 250 aaKnown RBP17.23■□□□□ 0.35
CDK9-201ENST00000373264 TMEM86BQ8N661 226 aa17.23■□□□□ 0.35
CDK9-201ENST00000373264 SPXQ9BT56 116 aa17.23■□□□□ 0.35
CDK9-201ENST00000373264 CHCHD7Q9BUK0 85 aa17.23■□□□□ 0.35
CDK9-201ENST00000373264 WFDC10AQ9H1F0 79 aa17.23■□□□□ 0.35
CDK9-201ENST00000373264 UBE2D1P51668 147 aa17.22■□□□□ 0.35
CDK9-201ENST00000373264 TEX48A0A1B0GUV7 120 aa17.22■□□□□ 0.35
CDK9-201ENST00000373264 IGHV3-30P01768 117 aa17.22■□□□□ 0.35
CDK9-201ENST00000373264 IGHV3-30-5P0DP03 117 aa17.22■□□□□ 0.35
CDK9-201ENST00000373264 FHL3Q13643 280 aa17.22■□□□□ 0.35
CDK9-201ENST00000373264 TRAV8-3A0A0A6YYJ7 113 aa17.21■□□□□ 0.34
CDK9-201ENST00000373264 STHQ8IWL8 128 aa17.21■□□□□ 0.34
CDK9-201ENST00000373264 SLC25A29Q8N8R3 303 aa17.21■□□□□ 0.34
CDK9-201ENST00000373264 LINC00467Q9BRT7 94 aa17.21■□□□□ 0.34
CDK9-201ENST00000373264 EDA2RQ9HAV5 297 aa17.21■□□□□ 0.34
CDK9-201ENST00000373264 UNC79Q9P2D8 2635 aa17.2■□□□□ 0.34
CDK9-201ENST00000373264 A8MZ25 164 aa17.2■□□□□ 0.34
CDK9-201ENST00000373264 G3V4G9 280 aa17.2■□□□□ 0.34
CDK9-201ENST00000373264 TSPAN13O95857 204 aa17.2■□□□□ 0.34
CDK9-201ENST00000373264 YAE1D1Q9NRH1 226 aa17.2■□□□□ 0.34
CDK9-201ENST00000373264 SH2D6Q7Z4S9 175 aa17.19■□□□□ 0.34
CDK9-201ENST00000373264 FASNP49327 2511 aaKnown RBP17.18■□□□□ 0.34
CDK9-201ENST00000373264 LEPROTO15243 131 aa17.18■□□□□ 0.34
CDK9-201ENST00000373264 IGHV3-53P01767 116 aa17.18■□□□□ 0.34
CDK9-201ENST00000373264 LINC01006Q8NI28 216 aa17.18■□□□□ 0.34
CDK9-201ENST00000373264 C10orf126Q8N4M7 172 aa17.18■□□□□ 0.34
CDK9-201ENST00000373264 CFC1BP0CG36 223 aa17.17■□□□□ 0.34
CDK9-201ENST00000373264 CFC1P0CG37 223 aa17.17■□□□□ 0.34
CDK9-201ENST00000373264 Q6ZUT4 128 aa17.17■□□□□ 0.34
CDK9-201ENST00000373264 BEAN1Q3B7T3 259 aa17.16■□□□□ 0.34
CDK9-201ENST00000373264 NDUFA11Q86Y39 141 aa17.16■□□□□ 0.34
CDK9-201ENST00000373264 UBE2D4Q9Y2X8 147 aa17.16■□□□□ 0.34
CDK9-201ENST00000373264 TRGV1A0A0A0MS02 117 aa17.16■□□□□ 0.34
CDK9-201ENST00000373264 EIF4EBP3O60516 100 aaPredicted RBP17.16■□□□□ 0.34
CDK9-201ENST00000373264 PYGO1Q9Y3Y4 419 aa17.15■□□□□ 0.34
CDK9-201ENST00000373264 LOC107984156A0A0G2JMH3 177 aa17.15■□□□□ 0.34
CDK9-201ENST00000373264 TMEM238LA0A1B0GVL6 79 aa17.15■□□□□ 0.34
CDK9-201ENST00000373264 A6NJY4 79 aa17.15■□□□□ 0.34
CDK9-201ENST00000373264 RS1O15537 224 aa17.15■□□□□ 0.34
CDK9-201ENST00000373264 ARL17AQ8IVW1 177 aa17.15■□□□□ 0.34
CDK9-201ENST00000373264 IGHV3-30-3P0DP02 117 aa17.14■□□□□ 0.34
CDK9-201ENST00000373264 Q6ZTI0 123 aa17.14■□□□□ 0.34
CDK9-201ENST00000373264 ETDBQ3ZM63 59 aa17.14■□□□□ 0.33
CDK9-201ENST00000373264 SPANXB1Q9NS25 103 aaPredicted RBP17.14■□□□□ 0.33
CDK9-201ENST00000373264 PRO0461Q9UI25 63 aa17.14■□□□□ 0.33
CDK9-201ENST00000373264 MRPS36P82909 103 aaKnown RBP17.12■□□□□ 0.33
CDK9-201ENST00000373264 PLA2G2AP14555 144 aa17.12■□□□□ 0.33
CDK9-201ENST00000373264 SMR3AQ99954 134 aa17.12■□□□□ 0.33
CDK9-201ENST00000373264 SPINK8P0C7L1 97 aa17.11■□□□□ 0.33
CDK9-201ENST00000373264 PIK3CD-AS1Q5SR53 167 aa17.11■□□□□ 0.33
CDK9-201ENST00000373264 A4D1N5 150 aa17.11■□□□□ 0.33
CDK9-201ENST00000373264 GIG44P09565 113 aaPredicted RBP17.11■□□□□ 0.33
CDK9-201ENST00000373264 GAGE13Q4V321 117 aa17.11■□□□□ 0.33
CDK9-201ENST00000373264 PTH2Q96A98 100 aa17.1■□□□□ 0.33
CDK9-201ENST00000373264 TIMM21Q9BVV7 248 aa17.1■□□□□ 0.33
CDK9-201ENST00000373264 F8W1H4 67 aa17.1■□□□□ 0.33
CDK9-201ENST00000373264 PSMB2P49721 201 aa17.1■□□□□ 0.33
CDK9-201ENST00000373264 MUSTN1Q8IVN3 82 aa17.1■□□□□ 0.33
CDK9-201ENST00000373264 TRAV25A0A0B4J276 109 aa17.09■□□□□ 0.33
CDK9-201ENST00000373264 RPL35AP18077 110 aaKnown RBP17.09■□□□□ 0.33
CDK9-201ENST00000373264 COTL1Q14019 142 aa17.09■□□□□ 0.33
CDK9-201ENST00000373264 TSSC4Q9Y5U2 329 aaPredicted RBP17.09■□□□□ 0.33
CDK9-201ENST00000373264 A0A0J9YXY3 114 aa17.09■□□□□ 0.33
CDK9-201ENST00000373264 NDUFA7O95182 113 aa17.09■□□□□ 0.33
CDK9-201ENST00000373264 INSL3P51460 131 aa17.09■□□□□ 0.33
CDK9-201ENST00000373264 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.09■□□□□ 0.33
CDK9-201ENST00000373264 IL17DQ8TAD2 202 aa17.09■□□□□ 0.33
CDK9-201ENST00000373264 LINC00694P0DN24 101 aa17.08■□□□□ 0.33
CDK9-201ENST00000373264 HECTD1Q9ULT8 2610 aa17.08■□□□□ 0.33
CDK9-201ENST00000373264 NOP10Q9NPE3 64 aaKnown RBP17.07■□□□□ 0.32
CDK9-201ENST00000373264 NOTCH2Q04721 2471 aa17.07■□□□□ 0.32
CDK9-201ENST00000373264 H7C2G1 150 aa17.07■□□□□ 0.32
CDK9-201ENST00000373264 SMCPP49901 116 aaPredicted RBP17.07■□□□□ 0.32
CDK9-201ENST00000373264 VWFP04275 2813 aa17.06■□□□□ 0.32
CDK9-201ENST00000373264 UBE2D3P61077 147 aa17.06■□□□□ 0.32
CDK9-201ENST00000373264 UBE2D2P62837 147 aa17.06■□□□□ 0.32
CDK9-201ENST00000373264 ADAMTSL4-AS1Q5T5F5 129 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms