RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SPINK13Q1W4C9 94 aa10.93□□□□□ -0.66
COL9A2-202ENST00000372748 HTN1P15515 57 aa10.92□□□□□ -0.66
COL9A2-202ENST00000372748 C10orf99Q6UWK7 81 aa10.92□□□□□ -0.66
COL9A2-202ENST00000372748 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
COL9A2-202ENST00000372748 ID1P41134 155 aa10.92□□□□□ -0.66
COL9A2-202ENST00000372748 ADAMTSL4-AS1Q5T5F5 129 aa10.92□□□□□ -0.66
COL9A2-202ENST00000372748 RHOHQ15669 191 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 ODF3Q96PU9 254 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 PRRC2AP48634 2157 aaKnown RBP10.91□□□□□ -0.66
COL9A2-202ENST00000372748 TRAV8-4A0A0B4J246 113 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 CCDC179H3BU77 68 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 I3L3M4 83 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 TTC32Q5I0X7 151 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 TIMM21Q9BVV7 248 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 PTPN13Q12923 2485 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 MSMBP08118 114 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 CD28P10747 220 aa10.91□□□□□ -0.66
COL9A2-202ENST00000372748 USP9YO00507 2555 aaPredicted RBP10.9□□□□□ -0.66
COL9A2-202ENST00000372748 C2orf82Q6UX34 121 aa10.9□□□□□ -0.66
COL9A2-202ENST00000372748 C15orf53Q8NAA6 179 aa10.9□□□□□ -0.66
COL9A2-202ENST00000372748 LITAFQ99732 161 aa10.9□□□□□ -0.66
COL9A2-202ENST00000372748 TRBV10-2A0A0K0K1G8 114 aa10.9□□□□□ -0.67
COL9A2-202ENST00000372748 M0QXV9 152 aa10.9□□□□□ -0.67
COL9A2-202ENST00000372748 PROK1P58294 105 aa10.9□□□□□ -0.67
COL9A2-202ENST00000372748 CLEC2BQ92478 149 aa10.9□□□□□ -0.67
COL9A2-202ENST00000372748 H3BMM0 161 aa10.89□□□□□ -0.67
COL9A2-202ENST00000372748 UBE2WQ96B02 151 aa10.89□□□□□ -0.67
COL9A2-202ENST00000372748 TRBV30A0A0K0K1B3 111 aa10.89□□□□□ -0.67
COL9A2-202ENST00000372748 IGLV1-40P01703 118 aa10.89□□□□□ -0.67
COL9A2-202ENST00000372748 IFITM1P13164 125 aa10.89□□□□□ -0.67
COL9A2-202ENST00000372748 H3BUA1 57 aa10.88□□□□□ -0.67
COL9A2-202ENST00000372748 Q9UF83 564 aa10.88□□□□□ -0.67
COL9A2-202ENST00000372748 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
COL9A2-202ENST00000372748 ZANQ9Y493 2812 aa10.88□□□□□ -0.67
COL9A2-202ENST00000372748 IGHV1OR15-1A0A075B7D0 117 aa10.88□□□□□ -0.67
COL9A2-202ENST00000372748 H7C423 109 aa10.88□□□□□ -0.67
COL9A2-202ENST00000372748 DAND5Q8N907 189 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 FAM104AQ969W3 186 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 NDUFA12Q9UI09 145 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 HELZ2Q9BYK8 2649 aaKnown RBP10.87□□□□□ -0.67
COL9A2-202ENST00000372748 NBPF19A0A087WUL8 3843 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 IGHV4-59P01825 116 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 PRM2P04554 102 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 MAPK1IP1LQ8NDC0 245 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 A0A0J9YX75 114 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 GAGE12JA6NER3 117 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 GAGE7O76087 117 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 GAGE12FP0CL80 117 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 GAGE12GP0CL81 117 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 GAGE12IP0CL82 117 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 RPL13AP40429 203 aaKnown RBP10.87□□□□□ -0.67
COL9A2-202ENST00000372748 GAGE4Q13068 117 aa10.87□□□□□ -0.67
COL9A2-202ENST00000372748 CUBNO60494 3623 aa10.86□□□□□ -0.67
COL9A2-202ENST00000372748 KNCNA6PVL3 124 aa10.86□□□□□ -0.67
COL9A2-202ENST00000372748 DUX3Q96PT4 197 aa10.86□□□□□ -0.67
COL9A2-202ENST00000372748 DUX5Q96PT3 197 aa10.85□□□□□ -0.67
COL9A2-202ENST00000372748 CFHR3Q02985 330 aa10.85□□□□□ -0.67
COL9A2-202ENST00000372748 BRI3O95415 125 aa10.84□□□□□ -0.67
COL9A2-202ENST00000372748 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
COL9A2-202ENST00000372748 DEFB112Q30KQ8 113 aa10.84□□□□□ -0.67
COL9A2-202ENST00000372748 IGHV1-58A0A0C4DH39 117 aa10.84□□□□□ -0.67
COL9A2-202ENST00000372748 MRPS36P82909 103 aaKnown RBP10.84□□□□□ -0.67
COL9A2-202ENST00000372748 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
COL9A2-202ENST00000372748 B4DSR2 109 aa10.83□□□□□ -0.68
COL9A2-202ENST00000372748 COX6CP09669 75 aa10.83□□□□□ -0.68
COL9A2-202ENST00000372748 TENM4Q6N022 2769 aa10.83□□□□□ -0.68
COL9A2-202ENST00000372748 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.82□□□□□ -0.68
COL9A2-202ENST00000372748 IGKV2-29A2NJV5 120 aaPredicted RBP10.82□□□□□ -0.68
COL9A2-202ENST00000372748 K7EMT4 169 aa10.82□□□□□ -0.68
COL9A2-202ENST00000372748 PSMB8P28062 276 aa10.82□□□□□ -0.68
COL9A2-202ENST00000372748 MIAQ16674 131 aa10.82□□□□□ -0.68
COL9A2-202ENST00000372748 RBMY1A1P0DJD3 496 aaKnown RBP10.82□□□□□ -0.68
COL9A2-202ENST00000372748 RBMY1CP0DJD4 496 aa10.82□□□□□ -0.68
COL9A2-202ENST00000372748 RBMY1FQ15415 496 aaKnown RBP10.82□□□□□ -0.68
COL9A2-202ENST00000372748 VSIG2Q96IQ7 327 aa10.82□□□□□ -0.68
COL9A2-202ENST00000372748 UBR5O95071 2799 aaPredicted RBP10.81□□□□□ -0.68
COL9A2-202ENST00000372748 CCDC168Q8NDH2 2452 aa10.81□□□□□ -0.68
COL9A2-202ENST00000372748 FBN2P35556 2912 aa10.81□□□□□ -0.68
COL9A2-202ENST00000372748 IGHV3-38A0A0C4DH36 116 aa10.81□□□□□ -0.68
COL9A2-202ENST00000372748 A0A0U1RRA0 63 aa10.81□□□□□ -0.68
COL9A2-202ENST00000372748 SYNJ2BPP57105 145 aa10.81□□□□□ -0.68
COL9A2-202ENST00000372748 TNFRSF18Q9Y5U5 241 aa10.81□□□□□ -0.68
COL9A2-202ENST00000372748 ANKRD17O75179 2603 aaKnown RBP10.81□□□□□ -0.68
COL9A2-202ENST00000372748 TMEM61Q8N0U2 210 aa10.8□□□□□ -0.68
COL9A2-202ENST00000372748 K7EQG2 157 aa10.8□□□□□ -0.68
COL9A2-202ENST00000372748 ZNF843Q8N446 348 aa10.8□□□□□ -0.68
COL9A2-202ENST00000372748 SPANXDQ9BXN6 97 aa10.8□□□□□ -0.68
COL9A2-202ENST00000372748 SPANXCQ9NY87 97 aa10.8□□□□□ -0.68
COL9A2-202ENST00000372748 PYGO1Q9Y3Y4 419 aa10.8□□□□□ -0.68
COL9A2-202ENST00000372748 Q6Q795 121 aa10.79□□□□□ -0.68
COL9A2-202ENST00000372748 Q6ZSN1 163 aa10.79□□□□□ -0.68
COL9A2-202ENST00000372748 LST1O00453 97 aa10.79□□□□□ -0.68
COL9A2-202ENST00000372748 C3orf56Q8N813 242 aa10.79□□□□□ -0.68
COL9A2-202ENST00000372748 LINC01600Q96MT4 127 aa10.79□□□□□ -0.68
COL9A2-202ENST00000372748 TRGV11A0A075B6L2 103 aa10.79□□□□□ -0.68
COL9A2-202ENST00000372748 H3BT86 120 aa10.79□□□□□ -0.68
COL9A2-202ENST00000372748 ZNF625Q96I27 306 aaPredicted RBP10.79□□□□□ -0.68
COL9A2-202ENST00000372748 CHCHD5Q9BSY4 110 aa10.79□□□□□ -0.68
COL9A2-202ENST00000372748 NOTCH2Q04721 2471 aa10.78□□□□□ -0.68
COL9A2-202ENST00000372748 SHISA2Q6UWI4 295 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms