RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 RHOHQ15669 191 aa7.56□□□□□ -1.2
KDM4A-201ENST00000372396 ZNF580Q9UK33 172 aa7.56□□□□□ -1.2
KDM4A-201ENST00000372396 RBM3P98179 157 aaKnown RBP7.55□□□□□ -1.2
KDM4A-201ENST00000372396 RPL18AQ02543 176 aaKnown RBP7.55□□□□□ -1.2
KDM4A-201ENST00000372396 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 KLK9Q9UKQ9 250 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 ICOSQ9Y6W8 199 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 DSCAML1Q8TD84 2053 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 NAV3Q8IVL0 2385 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 TRAV12-2A0A075B6T6 113 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 PSMB8P28062 276 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 C2orf66Q6UXQ4 117 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 A0A0J9YY99 117 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 MED14OSP0DP75 135 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
KDM4A-201ENST00000372396 RETNQ9HD89 108 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 VCANP13611 3396 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 CSPG4Q6UVK1 2322 aa7.55□□□□□ -1.2
KDM4A-201ENST00000372396 A0A087WWL8 130 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 SMAD5-AS1Q9Y6J3 95 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 IGHV3-64A0A075B6Q5 118 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 CRYGDP07320 174 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 KRTAP10-9P60411 292 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 MUSTN1Q8IVN3 82 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 A0A0C4DFX4 3053 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 C19orf54Q5BKX5 351 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 ZNF702PQ9H963 129 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 XCL2Q9UBD3 114 aa7.54□□□□□ -1.2
KDM4A-201ENST00000372396 IGKV3D-7A0A0C4DH55 119 aa7.53□□□□□ -1.2
KDM4A-201ENST00000372396 SLC25A29Q8N8R3 303 aa7.53□□□□□ -1.2
KDM4A-201ENST00000372396 CLEC2BQ92478 149 aa7.53□□□□□ -1.2
KDM4A-201ENST00000372396 TRGV4A0A0C4DH28 118 aa7.53□□□□□ -1.2
KDM4A-201ENST00000372396 IGHV3-30P01768 117 aa7.53□□□□□ -1.2
KDM4A-201ENST00000372396 IGHV3-30-5P0DP03 117 aa7.53□□□□□ -1.2
KDM4A-201ENST00000372396 MSRB1Q9NZV6 116 aa7.53□□□□□ -1.2
KDM4A-201ENST00000372396 CLPSL1A2RUU4 121 aa7.52□□□□□ -1.2
KDM4A-201ENST00000372396 IGLV2-11P01706 119 aa7.52□□□□□ -1.2
KDM4A-201ENST00000372396 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.2
KDM4A-201ENST00000372396 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.2
KDM4A-201ENST00000372396 SMIM2Q9BVW6 85 aa7.52□□□□□ -1.2
KDM4A-201ENST00000372396 PKD1L2Q7Z442 2459 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 TRAV26-2A0A0B4J265 109 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 GNRH2O43555 120 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 H7C423 109 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 LINC00336Q6ZUF6 198 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 C9orf85Q96MD7 179 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 U3KQE9 123 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 A0A0J9YX75 114 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 TRBV30A0A0K0K1B3 111 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 F8W735 103 aaPredicted RBP7.52□□□□□ -1.21
KDM4A-201ENST00000372396 TRIAP1O43715 76 aa7.52□□□□□ -1.21
KDM4A-201ENST00000372396 SMIM26A0A096LP01 95 aa7.51□□□□□ -1.21
KDM4A-201ENST00000372396 HIST2H2BCQ6DN03 193 aa7.51□□□□□ -1.21
KDM4A-201ENST00000372396 SDIM1Q6ZPB5 146 aa7.51□□□□□ -1.21
KDM4A-201ENST00000372396 Q6ZSV7 163 aa7.51□□□□□ -1.21
KDM4A-201ENST00000372396 FAM19A4Q96LR4 140 aa7.51□□□□□ -1.21
KDM4A-201ENST00000372396 IGHV3-73A0A0B4J1V6 119 aa7.5□□□□□ -1.21
KDM4A-201ENST00000372396 K7EQG2 157 aa7.5□□□□□ -1.21
KDM4A-201ENST00000372396 CD28P10747 220 aa7.5□□□□□ -1.21
KDM4A-201ENST00000372396 ZNF80P51504 273 aaPredicted RBP7.5□□□□□ -1.21
KDM4A-201ENST00000372396 CIRBPQ14011 172 aaKnown RBP7.5□□□□□ -1.21
KDM4A-201ENST00000372396 SERP1Q9Y6X1 66 aa7.5□□□□□ -1.21
KDM4A-201ENST00000372396 Q6ZS46 218 aa7.5□□□□□ -1.21
KDM4A-201ENST00000372396 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 DOPEY2Q9Y3R5 2298 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 TET2Q6N021 2002 aaPredicted RBP7.49□□□□□ -1.21
KDM4A-201ENST00000372396 ZNF292O60281 2723 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 TMEM61Q8N0U2 210 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 C20orf197Q8N268 126 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 HIVEP2P31629 2446 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 I3L3M4 83 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 SPRY2O43597 315 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 S100A7L2Q5SY68 101 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 POM121L12Q8N7R1 296 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 TMEM141Q96I45 108 aa7.49□□□□□ -1.21
KDM4A-201ENST00000372396 RNASE1P07998 156 aaKnown RBP7.48□□□□□ -1.21
KDM4A-201ENST00000372396 BAALC-AS2P0C853 105 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 C10orf99Q6UWK7 81 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 TMEM263Q8WUH6 116 aaKnown RBP7.48□□□□□ -1.21
KDM4A-201ENST00000372396 PTPN13Q12923 2485 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 IGKV3D-20A0A0C4DH25 116 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 C11orf86A6NJI1 115 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 USP17L23D6RBM5 183 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 CRIP1P50238 77 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 C9orf66Q5T8R8 295 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 C11orf68Q9H3H3 251 aaKnown RBP7.48□□□□□ -1.21
KDM4A-201ENST00000372396 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
KDM4A-201ENST00000372396 NEXN-AS1Q8NBZ9 246 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 DOPEY1Q5JWR5 2465 aa7.48□□□□□ -1.21
KDM4A-201ENST00000372396 DEFB1P60022 68 aa7.47□□□□□ -1.21
KDM4A-201ENST00000372396 APRG1Q8IVJ8 170 aa7.47□□□□□ -1.21
KDM4A-201ENST00000372396 TOMM6Q96B49 74 aa7.47□□□□□ -1.21
KDM4A-201ENST00000372396 GHRHP01286 108 aa7.47□□□□□ -1.21
KDM4A-201ENST00000372396 MYO18BQ8IUG5 2567 aa7.47□□□□□ -1.21
KDM4A-201ENST00000372396 TP53TG1Q9Y2A0 90 aa7.47□□□□□ -1.21
KDM4A-201ENST00000372396 A0A0U1RRA0 63 aa7.46□□□□□ -1.21
KDM4A-201ENST00000372396 APOC4P55056 127 aa7.46□□□□□ -1.21
KDM4A-201ENST00000372396 MUC3AQ02505 3323 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms