RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 OTOGQ6ZRI0 2925 aa13.15□□□□□ -0.3
CD40-201ENST00000372276 CD28P10747 220 aa13.15□□□□□ -0.3
CD40-201ENST00000372276 ZFHX3Q15911 3703 aa13.15□□□□□ -0.3
CD40-201ENST00000372276 ZNF22P17026 224 aaPredicted RBP13.14□□□□□ -0.31
CD40-201ENST00000372276 EMP1P54849 157 aa13.14□□□□□ -0.31
CD40-201ENST00000372276 MRPS36P82909 103 aaKnown RBP13.14□□□□□ -0.31
CD40-201ENST00000372276 SMAGPQ0VAQ4 97 aa13.14□□□□□ -0.31
CD40-201ENST00000372276 VPS25Q9BRG1 176 aa13.14□□□□□ -0.31
CD40-201ENST00000372276 CIDEAO60543 219 aa13.13□□□□□ -0.31
CD40-201ENST00000372276 COTL1Q14019 142 aa13.13□□□□□ -0.31
CD40-201ENST00000372276 RNF151Q2KHN1 245 aa13.13□□□□□ -0.31
CD40-201ENST00000372276 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
CD40-201ENST00000372276 TIMM21Q9BVV7 248 aa13.13□□□□□ -0.31
CD40-201ENST00000372276 AKAP9Q99996 3911 aa13.13□□□□□ -0.31
CD40-201ENST00000372276 MYO9AB2RTY4 2548 aa13.13□□□□□ -0.31
CD40-201ENST00000372276 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
CD40-201ENST00000372276 TRBV10-1A0A0K0K1A3 114 aa13.12□□□□□ -0.31
CD40-201ENST00000372276 TINCRA0A1B0GVN0 87 aa13.12□□□□□ -0.31
CD40-201ENST00000372276 G3V4G9 280 aa13.12□□□□□ -0.31
CD40-201ENST00000372276 MRPL16Q9NX20 251 aaKnown RBP13.12□□□□□ -0.31
CD40-201ENST00000372276 MAP1AP78559 2803 aaPredicted RBP13.12□□□□□ -0.31
CD40-201ENST00000372276 TMEM238C9JI98 176 aa13.11□□□□□ -0.31
CD40-201ENST00000372276 J3QR89 54 aa13.11□□□□□ -0.31
CD40-201ENST00000372276 IGHV3-30P01768 117 aa13.11□□□□□ -0.31
CD40-201ENST00000372276 IGHV3-30-5P0DP03 117 aa13.11□□□□□ -0.31
CD40-201ENST00000372276 IL17DQ8TAD2 202 aa13.11□□□□□ -0.31
CD40-201ENST00000372276 CHCHD7Q9BUK0 85 aa13.1□□□□□ -0.31
CD40-201ENST00000372276 YAE1D1Q9NRH1 226 aa13.1□□□□□ -0.31
CD40-201ENST00000372276 PGPEP1Q9NXJ5 209 aa13.1□□□□□ -0.31
CD40-201ENST00000372276 A0A0J9YXV3 536 aa13.1□□□□□ -0.31
CD40-201ENST00000372276 RPL24P83731 157 aaKnown RBP13.1□□□□□ -0.31
CD40-201ENST00000372276 ZNF418Q8TF45 676 aaPredicted RBP13.1□□□□□ -0.31
CD40-201ENST00000372276 DEFB104AQ8WTQ1 72 aa13.1□□□□□ -0.31
CD40-201ENST00000372276 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
CD40-201ENST00000372276 ESM1Q9NQ30 184 aa13.1□□□□□ -0.31
CD40-201ENST00000372276 UBE2D4Q9Y2X8 147 aa13.1□□□□□ -0.31
CD40-201ENST00000372276 PROK1P58294 105 aa13.09□□□□□ -0.31
CD40-201ENST00000372276 TSPEAR-AS2P59090 65 aa13.09□□□□□ -0.31
CD40-201ENST00000372276 GAGE13Q4V321 117 aa13.09□□□□□ -0.31
CD40-201ENST00000372276 TMEM263Q8WUH6 116 aaKnown RBP13.09□□□□□ -0.31
CD40-201ENST00000372276 XCL2Q9UBD3 114 aa13.09□□□□□ -0.31
CD40-201ENST00000372276 AZU1P20160 251 aa13.08□□□□□ -0.32
CD40-201ENST00000372276 NDUFA11Q86Y39 141 aa13.08□□□□□ -0.32
CD40-201ENST00000372276 C1orf158Q8N1D5 194 aa13.08□□□□□ -0.32
CD40-201ENST00000372276 LINC01006Q8NI28 216 aa13.08□□□□□ -0.32
CD40-201ENST00000372276 C1QTNF4Q9BXJ3 329 aa13.08□□□□□ -0.32
CD40-201ENST00000372276 TRBV20-1A0A075B6N2 111 aa13.07□□□□□ -0.32
CD40-201ENST00000372276 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.07□□□□□ -0.32
CD40-201ENST00000372276 NDUFA7O95182 113 aa13.07□□□□□ -0.32
CD40-201ENST00000372276 CITED2Q99967 270 aaPredicted RBP13.07□□□□□ -0.32
CD40-201ENST00000372276 NACAE9PAV3 2078 aa13.07□□□□□ -0.32
CD40-201ENST00000372276 TRAV4A0A0B4J268 109 aa13.06□□□□□ -0.32
CD40-201ENST00000372276 IGHV1-58A0A0C4DH39 117 aa13.06□□□□□ -0.32
CD40-201ENST00000372276 TIRAPP58753 221 aa13.06□□□□□ -0.32
CD40-201ENST00000372276 RPL36AP83881 106 aaKnown RBP13.06□□□□□ -0.32
CD40-201ENST00000372276 DAZ2Q13117 558 aaKnown RBP13.06□□□□□ -0.32
CD40-201ENST00000372276 Q6ZSN1 163 aa13.06□□□□□ -0.32
CD40-201ENST00000372276 DAZ4Q86SG3 579 aaKnown RBP13.06□□□□□ -0.32
CD40-201ENST00000372276 RPL36ALQ969Q0 106 aaKnown RBP13.06□□□□□ -0.32
CD40-201ENST00000372276 DAZ3Q9NR90 486 aaKnown RBP13.06□□□□□ -0.32
CD40-201ENST00000372276 MXRA5Q9NR99 2828 aa13.06□□□□□ -0.32
CD40-201ENST00000372276 ZANQ9Y493 2812 aa13.06□□□□□ -0.32
CD40-201ENST00000372276 A0A1W2PRX2 142 aa13.06□□□□□ -0.32
CD40-201ENST00000372276 PRO1854Q9UHT4 67 aa13.06□□□□□ -0.32
CD40-201ENST00000372276 IGHV3-30-3P0DP02 117 aa13.05□□□□□ -0.32
CD40-201ENST00000372276 PCP4P48539 62 aa13.05□□□□□ -0.32
CD40-201ENST00000372276 KRTAP1-1Q07627 177 aa13.05□□□□□ -0.32
CD40-201ENST00000372276 C10orf126Q8N4M7 172 aa13.05□□□□□ -0.32
CD40-201ENST00000372276 A0A0B4J2C4 111 aa13.04□□□□□ -0.32
CD40-201ENST00000372276 TSPAN13O95857 204 aa13.04□□□□□ -0.32
CD40-201ENST00000372276 UBE2D3P61077 147 aa13.04□□□□□ -0.32
CD40-201ENST00000372276 UBE2D2P62837 147 aa13.04□□□□□ -0.32
CD40-201ENST00000372276 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
CD40-201ENST00000372276 FAM104AQ969W3 186 aa13.04□□□□□ -0.32
CD40-201ENST00000372276 C16orf74Q96GX8 76 aa13.04□□□□□ -0.32
CD40-201ENST00000372276 GEMIN7Q9H840 131 aaKnown RBP13.04□□□□□ -0.32
CD40-201ENST00000372276 CSDC2Q9Y534 153 aaKnown RBP13.04□□□□□ -0.32
CD40-201ENST00000372276 ITPR3Q14573 2671 aa13.04□□□□□ -0.32
CD40-201ENST00000372276 TRGV1A0A0A0MS02 117 aa13.03□□□□□ -0.32
CD40-201ENST00000372276 H3BMG7 143 aa13.03□□□□□ -0.32
CD40-201ENST00000372276 SAP30O75446 220 aa13.03□□□□□ -0.32
CD40-201ENST00000372276 APOMO95445 188 aa13.03□□□□□ -0.32
CD40-201ENST00000372276 IGLV1-51P01701 117 aa13.03□□□□□ -0.32
CD40-201ENST00000372276 K7EQD1 137 aa13.02□□□□□ -0.32
CD40-201ENST00000372276 CFC1BP0CG36 223 aa13.02□□□□□ -0.32
CD40-201ENST00000372276 CFC1P0CG37 223 aa13.02□□□□□ -0.32
CD40-201ENST00000372276 HILS1P60008 231 aa13.02□□□□□ -0.32
CD40-201ENST00000372276 A0A0J9YXY3 114 aa13.02□□□□□ -0.33
CD40-201ENST00000372276 TIMM17BO60830 172 aa13.02□□□□□ -0.33
CD40-201ENST00000372276 PRM2P04554 102 aa13.02□□□□□ -0.33
CD40-201ENST00000372276 RNF183Q96D59 192 aa13.02□□□□□ -0.33
CD40-201ENST00000372276 VSIG2Q96IQ7 327 aa13.02□□□□□ -0.33
CD40-201ENST00000372276 IGLV5-45A0A087WSX0 123 aa13.01□□□□□ -0.33
CD40-201ENST00000372276 FAM19A3Q7Z5A8 133 aa13.01□□□□□ -0.33
CD40-201ENST00000372276 C11orf44Q8N8P7 122 aa13.01□□□□□ -0.33
CD40-201ENST00000372276 ATP6V0E2Q8NHE4 81 aa13.01□□□□□ -0.33
CD40-201ENST00000372276 HERVK_113P63121 156 aa13□□□□□ -0.33
CD40-201ENST00000372276 SPANXDQ9BXN6 97 aa13□□□□□ -0.33
CD40-201ENST00000372276 SPANXCQ9NY87 97 aa13□□□□□ -0.33
CD40-201ENST00000372276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms