RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 MSRB2Q9Y3D2 182 aa8.92□□□□□ -0.98
PTPN1-201ENST00000371621 DYNLRB2Q8TF09 96 aa8.91□□□□□ -0.98
PTPN1-201ENST00000371621 BOD1L1Q8NFC6 3051 aa8.91□□□□□ -0.98
PTPN1-201ENST00000371621 NCR3O14931 201 aa8.91□□□□□ -0.98
PTPN1-201ENST00000371621 C1orf195Q5TG92 126 aa8.91□□□□□ -0.98
PTPN1-201ENST00000371621 ENHOQ6UWT2 76 aa8.91□□□□□ -0.98
PTPN1-201ENST00000371621 TMEM61Q8N0U2 210 aa8.91□□□□□ -0.98
PTPN1-201ENST00000371621 TRBV7-1A0A0A6YYK4 115 aa8.9□□□□□ -0.98
PTPN1-201ENST00000371621 FSTL3O95633 263 aa8.9□□□□□ -0.98
PTPN1-201ENST00000371621 MIAQ16674 131 aa8.9□□□□□ -0.98
PTPN1-201ENST00000371621 FANCD2OSQ96PS1 177 aa8.9□□□□□ -0.98
PTPN1-201ENST00000371621 NDUFC2O95298 119 aa8.9□□□□□ -0.98
PTPN1-201ENST00000371621 MBD3L4A6NDZ8 208 aaPredicted RBP8.89□□□□□ -0.99
PTPN1-201ENST00000371621 MBD3L3A6NE82 208 aaPredicted RBP8.89□□□□□ -0.99
PTPN1-201ENST00000371621 MBD3L5A6NJ08 208 aaPredicted RBP8.89□□□□□ -0.99
PTPN1-201ENST00000371621 COX7A2LO14548 114 aa8.89□□□□□ -0.99
PTPN1-201ENST00000371621 PIK3CD-AS1Q5SR53 167 aa8.89□□□□□ -0.99
PTPN1-201ENST00000371621 IGLV11-55A0A075B6I3 123 aa8.89□□□□□ -0.99
PTPN1-201ENST00000371621 IGHV1-58A0A0C4DH39 117 aa8.89□□□□□ -0.99
PTPN1-201ENST00000371621 LINC01619G3V211 115 aa8.89□□□□□ -0.99
PTPN1-201ENST00000371621 SND1-IT1Q9HBX3 110 aa8.89□□□□□ -0.99
PTPN1-201ENST00000371621 TRAV13-2A0A0B4J235 113 aa8.89□□□□□ -0.99
PTPN1-201ENST00000371621 BRD3OSQ6XYD6 125 aa8.89□□□□□ -0.99
PTPN1-201ENST00000371621 TRGV2A0A075B6R0 118 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 TMEM223A0PJW6 202 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 IGHG3P01860 377 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 C20orf203Q8NBC4 194 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 OVOL2Q9BRP0 275 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 SMAD5-AS1Q9Y6J3 95 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 HIVEP2P31629 2446 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 DSPP15924 2871 aaKnown RBP8.88□□□□□ -0.99
PTPN1-201ENST00000371621 TRGV1A0A0A0MS02 117 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 CDKN2A-AS1Q9UH64 79 aa8.88□□□□□ -0.99
PTPN1-201ENST00000371621 TNRC18O15417 2968 aaPredicted RBP8.87□□□□□ -0.99
PTPN1-201ENST00000371621 SOSTDC1Q6X4U4 206 aa8.87□□□□□ -0.99
PTPN1-201ENST00000371621 FAM223AQ8IWN6 122 aa8.87□□□□□ -0.99
PTPN1-201ENST00000371621 UBE2E2Q96LR5 201 aa8.87□□□□□ -0.99
PTPN1-201ENST00000371621 U3KQE9 123 aa8.87□□□□□ -0.99
PTPN1-201ENST00000371621 DOPEY1Q5JWR5 2465 aa8.87□□□□□ -0.99
PTPN1-201ENST00000371621 IGHV7-4-1A0A0J9YVY3 117 aa8.87□□□□□ -0.99
PTPN1-201ENST00000371621 E7EQL1 145 aa8.87□□□□□ -0.99
PTPN1-201ENST00000371621 J3QLI3 93 aa8.87□□□□□ -0.99
PTPN1-201ENST00000371621 LRP4O75096 1905 aa8.86□□□□□ -0.99
PTPN1-201ENST00000371621 ORMDL1Q9P0S3 153 aa8.86□□□□□ -0.99
PTPN1-201ENST00000371621 CEP192Q8TEP8 1941 aa8.86□□□□□ -0.99
PTPN1-201ENST00000371621 ZNF883P0CG24 379 aa8.86□□□□□ -0.99
PTPN1-201ENST00000371621 CUL9Q8IWT3 2517 aa8.86□□□□□ -0.99
PTPN1-201ENST00000371621 IGLV2-18A0A075B6J9 118 aa8.86□□□□□ -0.99
PTPN1-201ENST00000371621 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
PTPN1-201ENST00000371621 MGAQ8IWI9 3026 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 NBL1P41271 181 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 POM121L12Q8N7R1 296 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 FAM240AA0A1B0GVK7 77 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 PRR9Q5T870 116 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 COL5A1P20908 1838 aaPredicted RBP8.85□□□□□ -0.99
PTPN1-201ENST00000371621 IGLV4-69A0A075B6H9 119 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 TIMM17BO60830 172 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 SCXQ7RTU7 201 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 UPK3BQ9BT76 320 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 JMJD1CQ15652 2540 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 CEP295Q9C0D2 2601 aa8.85□□□□□ -0.99
PTPN1-201ENST00000371621 DPH3Q96FX2 82 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 CFAP47Q6ZTR5 3102 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 LRCOL1A6NCL2 159 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 FAM110DQ8TAY7 271 aaPredicted RBP8.84□□□□□ -0.99
PTPN1-201ENST00000371621 IGLV4-3A0A075B6K6 122 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 SAA4P35542 130 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 C9orf47Q6ZRZ4 202 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 LAMA5O15230 3695 aa8.84□□□□□ -0.99
PTPN1-201ENST00000371621 SEC61GP60059 68 aa8.83□□□□□ -1
PTPN1-201ENST00000371621 CFHR3Q02985 330 aa8.83□□□□□ -1
PTPN1-201ENST00000371621 A0A0G2JNJ9 132 aa8.83□□□□□ -1
PTPN1-201ENST00000371621 IGLV1-47P01700 117 aa8.83□□□□□ -1
PTPN1-201ENST00000371621 C5orf38Q86SI9 138 aa8.83□□□□□ -1
PTPN1-201ENST00000371621 Q9UFV3 132 aa8.83□□□□□ -1
PTPN1-201ENST00000371621 LINC00308Q8TCZ7 52 aa8.83□□□□□ -1
PTPN1-201ENST00000371621 IGHV7-81A0A0B4J1V7 117 aa8.83□□□□□ -1
PTPN1-201ENST00000371621 TRBV7-7A0A0K0K1E9 115 aa8.82□□□□□ -1
PTPN1-201ENST00000371621 INSP01308 110 aa8.82□□□□□ -1
PTPN1-201ENST00000371621 CRYGDP07320 174 aa8.82□□□□□ -1
PTPN1-201ENST00000371621 CNFNQ9BYD5 112 aa8.82□□□□□ -1
PTPN1-201ENST00000371621 IGIPA6NJ69 53 aa8.82□□□□□ -1
PTPN1-201ENST00000371621 C22orf34Q6ZV56 151 aa8.82□□□□□ -1
PTPN1-201ENST00000371621 VSIG2Q96IQ7 327 aa8.82□□□□□ -1
PTPN1-201ENST00000371621 TRBV12-3P01733 135 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 COX6B1P14854 86 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 HOXB4P17483 251 aaPredicted RBP8.81□□□□□ -1
PTPN1-201ENST00000371621 DEFB131AP59861 70 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 HILS1P60008 231 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 HIST2H2BCQ6DN03 193 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 HIST2H2BDQ6DRA6 164 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 UNQ9165/PRO28630Q6UXU0 137 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 MINOS1Q5TGZ0 78 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 COX7B2Q8TF08 81 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 MAP1AP78559 2803 aaPredicted RBP8.81□□□□□ -1
PTPN1-201ENST00000371621 ZFHX4Q86UP3 3567 aa8.81□□□□□ -1
PTPN1-201ENST00000371621 UCNP55089 124 aa8.8□□□□□ -1
PTPN1-201ENST00000371621 CLPSL2Q6UWE3 100 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms