RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 LINC01560Q8TB33 94 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 FAM104AQ969W3 186 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 ACACBO00763 2458 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 TRAV41A0A0B4J266 112 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 NDUFA4O00483 81 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 RNASE13Q5GAN3 156 aaKnown RBP8.56□□□□□ -1.04
CTCFL-202ENST00000371196 C9orf85Q96MD7 179 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 BSNQ9UPA5 3926 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 IGHV3-16A0A0C4DH30 117 aa8.56□□□□□ -1.04
CTCFL-202ENST00000371196 DAZ2Q13117 558 aaKnown RBP8.56□□□□□ -1.04
CTCFL-202ENST00000371196 DAZ4Q86SG3 579 aaKnown RBP8.56□□□□□ -1.04
CTCFL-202ENST00000371196 DAZ1Q9NQZ3 744 aaKnown RBP8.56□□□□□ -1.04
CTCFL-202ENST00000371196 DAZ3Q9NR90 486 aaKnown RBP8.56□□□□□ -1.04
CTCFL-202ENST00000371196 FAM223BA6NKX1 122 aa8.55□□□□□ -1.04
CTCFL-202ENST00000371196 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
CTCFL-202ENST00000371196 EDA2RQ9HAV5 297 aa8.55□□□□□ -1.04
CTCFL-202ENST00000371196 COX7A2LO14548 114 aa8.55□□□□□ -1.04
CTCFL-202ENST00000371196 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
CTCFL-202ENST00000371196 PEMTQ9UBM1 199 aa8.55□□□□□ -1.04
CTCFL-202ENST00000371196 TIMM17BO60830 172 aa8.55□□□□□ -1.04
CTCFL-202ENST00000371196 CRYGAP11844 174 aa8.55□□□□□ -1.04
CTCFL-202ENST00000371196 ZFP36P26651 326 aaKnown RBP8.55□□□□□ -1.04
CTCFL-202ENST00000371196 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
CTCFL-202ENST00000371196 TMEM219Q86XT9 240 aa8.54□□□□□ -1.04
CTCFL-202ENST00000371196 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
CTCFL-202ENST00000371196 RHPN1-AS1Q9BWJ2 59 aa8.53□□□□□ -1.04
CTCFL-202ENST00000371196 SIRPDQ9H106 197 aa8.53□□□□□ -1.04
CTCFL-202ENST00000371196 ASH1LQ9NR48 2969 aaKnown RBP8.53□□□□□ -1.04
CTCFL-202ENST00000371196 C5orf56Q8N8D9 126 aa8.53□□□□□ -1.04
CTCFL-202ENST00000371196 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
CTCFL-202ENST00000371196 SAA4P35542 130 aa8.53□□□□□ -1.04
CTCFL-202ENST00000371196 UBTD1Q9HAC8 227 aa8.53□□□□□ -1.04
CTCFL-202ENST00000371196 ANKHD1Q8IWZ3 2542 aaKnown RBP8.52□□□□□ -1.04
CTCFL-202ENST00000371196 OR13C6PQ8NH95 151 aa8.52□□□□□ -1.05
CTCFL-202ENST00000371196 NACAE9PAV3 2078 aa8.52□□□□□ -1.05
CTCFL-202ENST00000371196 SPTBN1Q01082 2364 aaKnown RBP8.52□□□□□ -1.05
CTCFL-202ENST00000371196 hADV29S1A0JD25 119 aa8.52□□□□□ -1.05
CTCFL-202ENST00000371196 TIRAPP58753 221 aa8.52□□□□□ -1.05
CTCFL-202ENST00000371196 ATOX1O00244 68 aa8.52□□□□□ -1.05
CTCFL-202ENST00000371196 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
CTCFL-202ENST00000371196 ZFHX3Q15911 3703 aa8.51□□□□□ -1.05
CTCFL-202ENST00000371196 TRAV12-2A0A075B6T6 113 aa8.51□□□□□ -1.05
CTCFL-202ENST00000371196 IGHV3-11P01762 117 aa8.51□□□□□ -1.05
CTCFL-202ENST00000371196 HIST1H4AP62805 103 aaKnown RBP8.51□□□□□ -1.05
CTCFL-202ENST00000371196 BEAN1Q3B7T3 259 aa8.51□□□□□ -1.05
CTCFL-202ENST00000371196 LINC00308Q8TCZ7 52 aa8.51□□□□□ -1.05
CTCFL-202ENST00000371196 TRACP01848 142 aa8.5□□□□□ -1.05
CTCFL-202ENST00000371196 C19orf54Q5BKX5 351 aa8.5□□□□□ -1.05
CTCFL-202ENST00000371196 NDUFA1O15239 70 aa8.5□□□□□ -1.05
CTCFL-202ENST00000371196 Q8N2B8 174 aa8.5□□□□□ -1.05
CTCFL-202ENST00000371196 Q8NA96 180 aa8.5□□□□□ -1.05
CTCFL-202ENST00000371196 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
CTCFL-202ENST00000371196 IGKV3-20P01619 116 aa8.49□□□□□ -1.05
CTCFL-202ENST00000371196 INAFM2P0DMQ5 153 aa8.49□□□□□ -1.05
CTCFL-202ENST00000371196 CYSTM1Q9H1C7 97 aa8.49□□□□□ -1.05
CTCFL-202ENST00000371196 IGHV1OR15-1A0A075B7D0 117 aa8.49□□□□□ -1.05
CTCFL-202ENST00000371196 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
CTCFL-202ENST00000371196 GRNP28799 593 aaKnown RBP8.49□□□□□ -1.05
CTCFL-202ENST00000371196 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
CTCFL-202ENST00000371196 IGHV3-73A0A0B4J1V6 119 aa8.48□□□□□ -1.05
CTCFL-202ENST00000371196 IGHV3OR16-10A0A075B7F0 116 aa8.48□□□□□ -1.05
CTCFL-202ENST00000371196 WIPF1O43516 503 aa8.48□□□□□ -1.05
CTCFL-202ENST00000371196 IGHG2P01859 326 aa8.48□□□□□ -1.05
CTCFL-202ENST00000371196 UBE2D4Q9Y2X8 147 aa8.48□□□□□ -1.05
CTCFL-202ENST00000371196 CACNA1AO00555 2505 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 KLRB1Q12918 225 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 FAM222AQ5U5X8 452 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
CTCFL-202ENST00000371196 PKD1L2Q7Z442 2459 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 TRAV13-1A0A0B4J241 112 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 PROK1P58294 105 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 DPH3Q96FX2 82 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 MOB4Q9Y3A3 225 aa8.47□□□□□ -1.05
CTCFL-202ENST00000371196 EDN2P20800 178 aa8.46□□□□□ -1.05
CTCFL-202ENST00000371196 RPL18AQ02543 176 aaKnown RBP8.46□□□□□ -1.05
CTCFL-202ENST00000371196 Q9H8V8 135 aa8.46□□□□□ -1.05
CTCFL-202ENST00000371196 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.05
CTCFL-202ENST00000371196 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.05
CTCFL-202ENST00000371196 IGKV2-29A2NJV5 120 aaPredicted RBP8.46□□□□□ -1.05
CTCFL-202ENST00000371196 KIR2DL5BQ8NHK3 375 aa8.46□□□□□ -1.05
CTCFL-202ENST00000371196 USMG5Q96IX5 58 aa8.46□□□□□ -1.05
CTCFL-202ENST00000371196 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.05
CTCFL-202ENST00000371196 SPTAN1Q13813 2472 aaKnown RBP8.46□□□□□ -1.06
CTCFL-202ENST00000371196 TMEM258P61165 79 aa8.45□□□□□ -1.06
CTCFL-202ENST00000371196 SPINK13Q1W4C9 94 aa8.45□□□□□ -1.06
CTCFL-202ENST00000371196 SOSTDC1Q6X4U4 206 aa8.45□□□□□ -1.06
CTCFL-202ENST00000371196 COPS9Q8WXC6 57 aa8.45□□□□□ -1.06
CTCFL-202ENST00000371196 MALP21145 153 aa8.45□□□□□ -1.06
CTCFL-202ENST00000371196 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.45□□□□□ -1.06
CTCFL-202ENST00000371196 Q9HAA7 133 aa8.45□□□□□ -1.06
CTCFL-202ENST00000371196 RS1O15537 224 aa8.44□□□□□ -1.06
CTCFL-202ENST00000371196 Q9UF83 564 aa8.44□□□□□ -1.06
CTCFL-202ENST00000371196 HRNRQ86YZ3 2850 aaPredicted RBP8.44□□□□□ -1.06
CTCFL-202ENST00000371196 PF4V1P10720 104 aa8.44□□□□□ -1.06
CTCFL-202ENST00000371196 C11orf71Q6IPW1 123 aa8.44□□□□□ -1.06
CTCFL-202ENST00000371196 PRIMA1Q86XR5 153 aa8.44□□□□□ -1.06
CTCFL-202ENST00000371196 SERP2Q8N6R1 65 aa8.44□□□□□ -1.06
CTCFL-202ENST00000371196 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms