RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 IGLV10-54A0A075B6I4 117 aa9.68□□□□□ -0.86
SSR4-204ENST00000370087 hDV102S1A0JD36 115 aa9.68□□□□□ -0.86
SSR4-204ENST00000370087 GAGE6Q13070 117 aa9.68□□□□□ -0.86
SSR4-204ENST00000370087 TMEM241Q24JQ0 296 aa9.68□□□□□ -0.86
SSR4-204ENST00000370087 COMMD7Q86VX2 200 aa9.68□□□□□ -0.86
SSR4-204ENST00000370087 DPH3P1Q9H4G8 78 aa9.68□□□□□ -0.86
SSR4-204ENST00000370087 PLAC8Q9NZF1 115 aa9.68□□□□□ -0.86
SSR4-204ENST00000370087 IGHV3-64A0A075B6Q5 118 aa9.67□□□□□ -0.86
SSR4-204ENST00000370087 OR5AL1P0C617 328 aa9.67□□□□□ -0.86
SSR4-204ENST00000370087 KRTAP10-8P60410 259 aa9.67□□□□□ -0.86
SSR4-204ENST00000370087 SPANXN1Q5VSR9 72 aa9.67□□□□□ -0.86
SSR4-204ENST00000370087 NUDT10Q8NFP7 164 aa9.67□□□□□ -0.86
SSR4-204ENST00000370087 NUDT11Q96G61 164 aa9.67□□□□□ -0.86
SSR4-204ENST00000370087 RNF185Q96GF1 192 aa9.67□□□□□ -0.86
SSR4-204ENST00000370087 RPP21Q9H633 154 aaKnown RBP9.67□□□□□ -0.86
SSR4-204ENST00000370087 A0A0J9YXV3 536 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 F2Z2F3 143 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 K7EN84 100 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 GATCO43716 136 aaKnown RBP9.66□□□□□ -0.86
SSR4-204ENST00000370087 PRR3P79522 188 aaKnown RBP9.66□□□□□ -0.86
SSR4-204ENST00000370087 SRSF3P84103 164 aaKnown RBP9.66□□□□□ -0.86
SSR4-204ENST00000370087 FAM231DQ6ZW35 169 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 LINC01551Q86U37 167 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 CLRN3Q8NCR9 226 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 DPH3Q96FX2 82 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 TPPP3Q9BW30 176 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 NAT8Q9UHE5 227 aa9.66□□□□□ -0.86
SSR4-204ENST00000370087 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
SSR4-204ENST00000370087 A8MWL6 223 aa9.65□□□□□ -0.86
SSR4-204ENST00000370087 SNAI2O43623 268 aa9.65□□□□□ -0.86
SSR4-204ENST00000370087 RAB4BP61018 213 aa9.65□□□□□ -0.86
SSR4-204ENST00000370087 ZNF56Q15929 161 aa9.65□□□□□ -0.86
SSR4-204ENST00000370087 SLC7A5P1Q8MH63 180 aa9.65□□□□□ -0.86
SSR4-204ENST00000370087 SSBP4Q9BWG4 385 aaPredicted RBP9.65□□□□□ -0.86
SSR4-204ENST00000370087 RNASE7Q9H1E1 156 aaKnown RBP9.65□□□□□ -0.86
SSR4-204ENST00000370087 LINC00862A6NCI5 91 aa9.64□□□□□ -0.87
SSR4-204ENST00000370087 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
SSR4-204ENST00000370087 CACNG7P62955 275 aa9.64□□□□□ -0.87
SSR4-204ENST00000370087 ADIRFQ15847 76 aa9.64□□□□□ -0.87
SSR4-204ENST00000370087 WDR73Q6P4I2 378 aa9.64□□□□□ -0.87
SSR4-204ENST00000370087 C9JQL5 133 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 GZMBP10144 247 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 REG3AQ06141 175 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 CT83Q5H943 113 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 UQCC3Q6UW78 93 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 AP1S3Q96PC3 154 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 GFRA4Q9GZZ7 299 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 OSTCQ9NRP0 149 aa9.63□□□□□ -0.87
SSR4-204ENST00000370087 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
SSR4-204ENST00000370087 PKIAP61925 76 aa9.62□□□□□ -0.87
SSR4-204ENST00000370087 C20orf203Q8NBC4 194 aa9.62□□□□□ -0.87
SSR4-204ENST00000370087 BORCS7Q96B45 105 aa9.62□□□□□ -0.87
SSR4-204ENST00000370087 MUC21A0A140T8X8 626 aa9.61□□□□□ -0.87
SSR4-204ENST00000370087 TRGC1P0CF51 173 aa9.61□□□□□ -0.87
SSR4-204ENST00000370087 RPL23P62829 140 aaKnown RBP9.61□□□□□ -0.87
SSR4-204ENST00000370087 GTSF1Q8WW33 167 aa9.61□□□□□ -0.87
SSR4-204ENST00000370087 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
SSR4-204ENST00000370087 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
SSR4-204ENST00000370087 SSTP61278 116 aa9.6□□□□□ -0.87
SSR4-204ENST00000370087 COX6A2Q02221 97 aa9.6□□□□□ -0.87
SSR4-204ENST00000370087 PNRC1Q12796 327 aaPredicted RBP9.6□□□□□ -0.87
SSR4-204ENST00000370087 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
SSR4-204ENST00000370087 SMIM15Q7Z3B0 74 aa9.6□□□□□ -0.87
SSR4-204ENST00000370087 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
SSR4-204ENST00000370087 TRBV25-1A0A075B6N4 114 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.59□□□□□ -0.87
SSR4-204ENST00000370087 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 FAM231BA6NCW3 169 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 CTRLP40313 264 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 IQCJQ1A5X6 159 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 MAJINQ3KP22 176 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 PRSS3P2Q8NHM4 247 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 TSKUQ8WUA8 353 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 AP5S1Q9NUS5 200 aa9.59□□□□□ -0.87
SSR4-204ENST00000370087 TWIST1Q15672 202 aa9.58□□□□□ -0.88
SSR4-204ENST00000370087 MUC2Q02817 5179 aa9.58□□□□□ -0.88
SSR4-204ENST00000370087 F5H697 171 aa9.57□□□□□ -0.88
SSR4-204ENST00000370087 PPP1R2P9O14990 202 aa9.57□□□□□ -0.88
SSR4-204ENST00000370087 NTF3P20783 257 aa9.57□□□□□ -0.88
SSR4-204ENST00000370087 NDUFA5Q16718 116 aa9.57□□□□□ -0.88
SSR4-204ENST00000370087 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
SSR4-204ENST00000370087 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
SSR4-204ENST00000370087 CNFNQ9BYD5 112 aa9.57□□□□□ -0.88
SSR4-204ENST00000370087 IGHV1-24A0A0C4DH33 117 aa9.56□□□□□ -0.88
SSR4-204ENST00000370087 H7C1H1 209 aa9.56□□□□□ -0.88
SSR4-204ENST00000370087 FOXA3P55318 350 aaPredicted RBP9.56□□□□□ -0.88
SSR4-204ENST00000370087 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
SSR4-204ENST00000370087 STPG4Q8N801 248 aa9.56□□□□□ -0.88
SSR4-204ENST00000370087 PGLYRP4Q96LB8 373 aa9.56□□□□□ -0.88
SSR4-204ENST00000370087 V9GYV3 84 aa9.56□□□□□ -0.88
SSR4-204ENST00000370087 TRAV8-4A0A0B4J246 113 aa9.55□□□□□ -0.88
SSR4-204ENST00000370087 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
SSR4-204ENST00000370087 HIGD1CA8MV81 97 aa9.55□□□□□ -0.88
SSR4-204ENST00000370087 F8W036 122 aa9.55□□□□□ -0.88
SSR4-204ENST00000370087 MT-ND4LP03901 98 aa9.55□□□□□ -0.88
SSR4-204ENST00000370087 SPINK6Q6UWN8 80 aa9.55□□□□□ -0.88
SSR4-204ENST00000370087 NAT8BQ9UHF3 227 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms