RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 RNF183Q96D59 192 aa9.19□□□□□ -0.94
LINC01561-201ENST00000369071 TRBV10-2A0A0K0K1G8 114 aa9.19□□□□□ -0.94
LINC01561-201ENST00000369071 RPL13AP40429 203 aaKnown RBP9.19□□□□□ -0.94
LINC01561-201ENST00000369071 ATP5J2P56134 94 aa9.18□□□□□ -0.94
LINC01561-201ENST00000369071 BEX4Q9NWD9 120 aaPredicted RBP9.18□□□□□ -0.94
LINC01561-201ENST00000369071 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 DEFB112Q30KQ8 113 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 RNASE13Q5GAN3 156 aaKnown RBP9.17□□□□□ -0.94
LINC01561-201ENST00000369071 TEX29Q8N6K0 151 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 VSIG2Q96IQ7 327 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 PRSS2P07478 247 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 MIAQ16674 131 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 Q5PR19 223 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 IGSF10Q6WRI0 2623 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 DUX5Q96PT3 197 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 CHCHD7Q9BUK0 85 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 Q9UF83 564 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 TNFRSF18Q9Y5U5 241 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 ICOSQ9Y6W8 199 aa9.17□□□□□ -0.94
LINC01561-201ENST00000369071 TEX49A0A1B0GTD5 131 aa9.16□□□□□ -0.94
LINC01561-201ENST00000369071 B4DSR2 109 aa9.16□□□□□ -0.94
LINC01561-201ENST00000369071 Q6ZSN1 163 aa9.16□□□□□ -0.94
LINC01561-201ENST00000369071 UBE2D4Q9Y2X8 147 aa9.16□□□□□ -0.94
LINC01561-201ENST00000369071 KNCNA6PVL3 124 aa9.16□□□□□ -0.94
LINC01561-201ENST00000369071 BBC3Q96PG8 261 aaPredicted RBP9.16□□□□□ -0.94
LINC01561-201ENST00000369071 ANAPC13Q9BS18 74 aa9.16□□□□□ -0.94
LINC01561-201ENST00000369071 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
LINC01561-201ENST00000369071 A8MTW9 85 aa9.15□□□□□ -0.94
LINC01561-201ENST00000369071 A8MZ25 164 aa9.15□□□□□ -0.94
LINC01561-201ENST00000369071 HTN1P15515 57 aa9.15□□□□□ -0.94
LINC01561-201ENST00000369071 GATA3P23771 443 aa9.15□□□□□ -0.94
LINC01561-201ENST00000369071 HOXD3P31249 432 aaPredicted RBP9.15□□□□□ -0.94
LINC01561-201ENST00000369071 COL12A1Q99715 3063 aa9.15□□□□□ -0.95
LINC01561-201ENST00000369071 DOPEY2Q9Y3R5 2298 aa9.15□□□□□ -0.95
LINC01561-201ENST00000369071 CRLF1O75462 422 aa9.14□□□□□ -0.95
LINC01561-201ENST00000369071 PRM2P04554 102 aa9.14□□□□□ -0.95
LINC01561-201ENST00000369071 TRAV4A0A0B4J268 109 aa9.14□□□□□ -0.95
LINC01561-201ENST00000369071 RBMY1BA6NDE4 496 aaKnown RBP9.14□□□□□ -0.95
LINC01561-201ENST00000369071 RBMY1EA6NEQ0 496 aaKnown RBP9.14□□□□□ -0.95
LINC01561-201ENST00000369071 H3BMM0 161 aa9.14□□□□□ -0.95
LINC01561-201ENST00000369071 H7C423 109 aa9.14□□□□□ -0.95
LINC01561-201ENST00000369071 RBMY1DP0C7P1 496 aaKnown RBP9.14□□□□□ -0.95
LINC01561-201ENST00000369071 NHLRC4P0CG21 123 aaPredicted RBP9.14□□□□□ -0.95
LINC01561-201ENST00000369071 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
LINC01561-201ENST00000369071 Q6ZSV7 163 aa9.14□□□□□ -0.95
LINC01561-201ENST00000369071 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
LINC01561-201ENST00000369071 PRRC2AP48634 2157 aaKnown RBP9.13□□□□□ -0.95
LINC01561-201ENST00000369071 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.13□□□□□ -0.95
LINC01561-201ENST00000369071 IGKV2-29A2NJV5 120 aaPredicted RBP9.13□□□□□ -0.95
LINC01561-201ENST00000369071 SNCGO76070 127 aa9.13□□□□□ -0.95
LINC01561-201ENST00000369071 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
LINC01561-201ENST00000369071 TIMM17BO60830 172 aa9.13□□□□□ -0.95
LINC01561-201ENST00000369071 C2orf82Q6UX34 121 aa9.13□□□□□ -0.95
LINC01561-201ENST00000369071 TMEM61Q8N0U2 210 aa9.13□□□□□ -0.95
LINC01561-201ENST00000369071 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
LINC01561-201ENST00000369071 PRORYQ9H606 182 aa9.13□□□□□ -0.95
LINC01561-201ENST00000369071 H3BT86 120 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 DEFB131AP59861 70 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 NPC2P61916 151 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 GAGE2BQ13066 116 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 GAGE2EQ4V326 116 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 UBE2E2Q96LR5 201 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 DUX3Q96PT4 197 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 YAE1D1Q9NRH1 226 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 GAGE2DQ9UEU5 116 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 COX6CP09669 75 aa9.12□□□□□ -0.95
LINC01561-201ENST00000369071 NACAE9PAV3 2078 aa9.11□□□□□ -0.95
LINC01561-201ENST00000369071 LST1O00453 97 aa9.11□□□□□ -0.95
LINC01561-201ENST00000369071 IFITM1P13164 125 aa9.11□□□□□ -0.95
LINC01561-201ENST00000369071 ZNF415Q09FC8 603 aa9.11□□□□□ -0.95
LINC01561-201ENST00000369071 Q6Q795 121 aa9.11□□□□□ -0.95
LINC01561-201ENST00000369071 CLEC2BQ92478 149 aa9.11□□□□□ -0.95
LINC01561-201ENST00000369071 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
LINC01561-201ENST00000369071 CDKN2A-AS1Q9UH64 79 aa9.1□□□□□ -0.95
LINC01561-201ENST00000369071 IGHV3-53P01767 116 aa9.1□□□□□ -0.95
LINC01561-201ENST00000369071 NDUFV3P56181 108 aaKnown RBP9.1□□□□□ -0.95
LINC01561-201ENST00000369071 TIRAPP58753 221 aa9.1□□□□□ -0.95
LINC01561-201ENST00000369071 C11orf72Q8NBR9 251 aa9.1□□□□□ -0.95
LINC01561-201ENST00000369071 DNAJC30Q96LL9 226 aa9.1□□□□□ -0.95
LINC01561-201ENST00000369071 ZNF702PQ9H963 129 aa9.1□□□□□ -0.95
LINC01561-201ENST00000369071 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 NDUFA1O15239 70 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 GAGE5Q13069 117 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 GAGE6Q13070 117 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 CRYBG3Q68DQ2 2970 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.09□□□□□ -0.95
LINC01561-201ENST00000369071 C15orf53Q8NAA6 179 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 SLURP1P55000 103 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 DAND5Q8N907 189 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 TMEM101Q96IK0 257 aa9.09□□□□□ -0.95
LINC01561-201ENST00000369071 SORL1Q92673 2214 aa9.08□□□□□ -0.96
LINC01561-201ENST00000369071 CELSR2Q9HCU4 2923 aa9.08□□□□□ -0.96
LINC01561-201ENST00000369071 PLA2G2AP14555 144 aa9.08□□□□□ -0.96
LINC01561-201ENST00000369071 BEAN1Q3B7T3 259 aa9.08□□□□□ -0.96
LINC01561-201ENST00000369071 LINC01356Q8N9X3 169 aa9.08□□□□□ -0.96
LINC01561-201ENST00000369071 CITED2Q99967 270 aaPredicted RBP9.08□□□□□ -0.96
LINC01561-201ENST00000369071 VPREB3Q9UKI3 123 aa9.08□□□□□ -0.96
LINC01561-201ENST00000369071 TENM4Q6N022 2769 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms