RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 C9orf85Q96MD7 179 aa12.61□□□□□ -0.39
NID1-202ENST00000366595 Q6ZTI0 123 aa12.6□□□□□ -0.39
NID1-202ENST00000366595 U3KQK5 164 aa12.6□□□□□ -0.39
NID1-202ENST00000366595 P0C879 139 aa12.6□□□□□ -0.39
NID1-202ENST00000366595 WDR90Q96KV7 1748 aa12.6□□□□□ -0.39
NID1-202ENST00000366595 GDF5OSQ5U4N7 250 aa12.6□□□□□ -0.39
NID1-202ENST00000366595 CFAP126Q5VTH2 177 aa12.6□□□□□ -0.39
NID1-202ENST00000366595 TNRC6BQ9UPQ9 1833 aaKnown RBP12.6□□□□□ -0.39
NID1-202ENST00000366595 CACNA1HO95180 2353 aa12.6□□□□□ -0.39
NID1-202ENST00000366595 CRYGDP07320 174 aa12.59□□□□□ -0.39
NID1-202ENST00000366595 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.59□□□□□ -0.392e-16■□□□□ 9.7
NID1-202ENST00000366595 SYCNQ0VAF6 134 aa12.59□□□□□ -0.39
NID1-202ENST00000366595 TRBV6-4A0A1B0GX49 114 aa12.59□□□□□ -0.39
NID1-202ENST00000366595 M0R378 163 aa12.59□□□□□ -0.39
NID1-202ENST00000366595 GRNP28799 593 aaKnown RBP12.59□□□□□ -0.39
NID1-202ENST00000366595 DEFB1P60022 68 aa12.59□□□□□ -0.39
NID1-202ENST00000366595 PIP4P1Q86T03 277 aa12.58□□□□□ -0.4
NID1-202ENST00000366595 E7EUB6 86 aa12.58□□□□□ -0.4
NID1-202ENST00000366595 MIFP14174 115 aa12.58□□□□□ -0.4
NID1-202ENST00000366595 IGF2-ASQ6U949 168 aa12.58□□□□□ -0.4
NID1-202ENST00000366595 PLXNA3P51805 1871 aa12.58□□□□□ -0.4
NID1-202ENST00000366595 TRBV6-5A0A0K0K1A5 114 aa12.58□□□□□ -0.4
NID1-202ENST00000366595 PLXNA4Q9HCM2 1894 aa12.57□□□□□ -0.4
NID1-202ENST00000366595 MAPKAPK5-AS1Q8N8E1 139 aa12.57□□□□□ -0.4
NID1-202ENST00000366595 C3orf84H3BNL1 204 aa12.57□□□□□ -0.4
NID1-202ENST00000366595 LINC00322Q6ZN03 302 aaPredicted RBP12.57□□□□□ -0.4
NID1-202ENST00000366595 WFDC13Q8IUB5 93 aa12.57□□□□□ -0.4
NID1-202ENST00000366595 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
NID1-202ENST00000366595 K7EQG2 157 aa12.57□□□□□ -0.4
NID1-202ENST00000366595 MYLKQ15746 1914 aa12.57□□□□□ -0.4
NID1-202ENST00000366595 CCDC179H3BU77 68 aa12.56□□□□□ -0.4
NID1-202ENST00000366595 CCDC140Q96MF4 163 aa12.56□□□□□ -0.4
NID1-202ENST00000366595 Q6ZQY7 126 aa12.56□□□□□ -0.4
NID1-202ENST00000366595 C7orf33Q8WU49 177 aa12.56□□□□□ -0.4
NID1-202ENST00000366595 TRAV7A0A075B6U4 112 aa12.56□□□□□ -0.4
NID1-202ENST00000366595 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.56□□□□□ -0.4
NID1-202ENST00000366595 ZFAND3Q9H8U3 227 aa12.56□□□□□ -0.4
NID1-202ENST00000366595 XIRP1Q702N8 1843 aaKnown RBP12.56□□□□□ -0.4
NID1-202ENST00000366595 M0QY20 66 aa12.55□□□□□ -0.4
NID1-202ENST00000366595 UBE2D2P62837 147 aa12.55□□□□□ -0.4
NID1-202ENST00000366595 LINC00574Q9H8X3 128 aa12.55□□□□□ -0.4
NID1-202ENST00000366595 TP53TG3Q9ULZ0 132 aa12.55□□□□□ -0.4
NID1-202ENST00000366595 TNFRSF13BO14836 293 aaPredicted RBP12.54□□□□□ -0.4
NID1-202ENST00000366595 ZFP36P26651 326 aaKnown RBP12.54□□□□□ -0.4
NID1-202ENST00000366595 PMAIP1Q13794 54 aa12.54□□□□□ -0.4
NID1-202ENST00000366595 FAM19A5Q7Z5A7 132 aaPredicted RBP12.53□□□□□ -0.4
NID1-202ENST00000366595 ANK1P16157 1881 aa12.53□□□□□ -0.4
NID1-202ENST00000366595 HILS1P60008 231 aa12.53□□□□□ -0.4
NID1-202ENST00000366595 XAGE1AQ9HD64 81 aa12.53□□□□□ -0.4
NID1-202ENST00000366595 IGF1P05019 195 aa12.52□□□□□ -0.4
NID1-202ENST00000366595 COX17Q14061 63 aa12.52□□□□□ -0.4
NID1-202ENST00000366595 A0A0J9YWU9 116 aa12.52□□□□□ -0.4
NID1-202ENST00000366595 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.4
NID1-202ENST00000366595 DYSFO75923 2080 aa12.52□□□□□ -0.41
NID1-202ENST00000366595 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.41
NID1-202ENST00000366595 XGP55808 180 aa12.51□□□□□ -0.41
NID1-202ENST00000366595 ODF3BA8MYP8 253 aa12.51□□□□□ -0.41
NID1-202ENST00000366595 LY6LH3BQJ8 138 aa12.5□□□□□ -0.41
NID1-202ENST00000366595 DEFB131BA0A096LNP1 70 aa12.5□□□□□ -0.41
NID1-202ENST00000366595 PRR4Q16378 134 aa12.5□□□□□ -0.41
NID1-202ENST00000366595 LINC00694P0DN24 101 aa12.49□□□□□ -0.41
NID1-202ENST00000366595 FBXL19-AS1Q494R0 122 aa12.49□□□□□ -0.41
NID1-202ENST00000366595 RNF185Q96GF1 192 aa12.49□□□□□ -0.41
NID1-202ENST00000366595 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.49□□□□□ -0.41
NID1-202ENST00000366595 TCF20Q9UGU0 1960 aaKnown RBP12.49□□□□□ -0.41
NID1-202ENST00000366595 IGLV4-69A0A075B6H9 119 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 DEFB114Q30KQ6 69 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 LINC00526Q96FQ7 95 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 NCKAP5O14513 1909 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 SHANK1Q9Y566 2161 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 EBI3Q14213 229 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 LRCOL1A6NCL2 159 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 M0QXV9 152 aa12.48□□□□□ -0.41
NID1-202ENST00000366595 C2orf91Q6ZV80 131 aa12.47□□□□□ -0.41
NID1-202ENST00000366595 SIP14410 1827 aa12.47□□□□□ -0.41
NID1-202ENST00000366595 SMIM11BQ8TCY0 68 aa12.47□□□□□ -0.41
NID1-202ENST00000366595 PCNX2A6NKB5 2137 aa12.46□□□□□ -0.41
NID1-202ENST00000366595 ADORA2A-AS1P86434 159 aa12.46□□□□□ -0.41
NID1-202ENST00000366595 SPINK6Q6UWN8 80 aa12.46□□□□□ -0.41
NID1-202ENST00000366595 LINC01548A6NM66 108 aa12.46□□□□□ -0.42
NID1-202ENST00000366595 ZNF73O43830 326 aaPredicted RBP12.46□□□□□ -0.42
NID1-202ENST00000366595 DCANP1Q8TF63 244 aa12.46□□□□□ -0.42
NID1-202ENST00000366595 SBF1O95248 1867 aa12.45□□□□□ -0.42
NID1-202ENST00000366595 FSTL3O95633 263 aa12.45□□□□□ -0.42
NID1-202ENST00000366595 DNAJC9-AS1A6NH13 148 aa12.45□□□□□ -0.42
NID1-202ENST00000366595 UBE2D1P51668 147 aa12.45□□□□□ -0.42
NID1-202ENST00000366595 PLCE1Q9P212 2302 aa12.45□□□□□ -0.42
NID1-202ENST00000366595 FAM30AQ9NZY2 134 aa12.45□□□□□ -0.42
NID1-202ENST00000366595 NTM-AS1Q6ZSK4 140 aa12.44□□□□□ -0.42
NID1-202ENST00000366595 LOC107984640A0A0U1RRK4 108 aa12.44□□□□□ -0.42
NID1-202ENST00000366595 YPEL4Q96NS1 127 aa12.44□□□□□ -0.42
NID1-202ENST00000366595 TSHBP01222 138 aa12.44□□□□□ -0.42
NID1-202ENST00000366595 NRACQ8N912 160 aa12.43□□□□□ -0.42
NID1-202ENST00000366595 MED13Q9UHV7 2174 aa12.43□□□□□ -0.42
NID1-202ENST00000366595 ZSWIM8A7E2V4 1837 aa12.43□□□□□ -0.42
NID1-202ENST00000366595 IGKV2-28A0A075B6P5 120 aa12.42□□□□□ -0.42
NID1-202ENST00000366595 IGKV2D-28P01615 120 aa12.42□□□□□ -0.42
NID1-202ENST00000366595 MRGPRG-AS1Q2M3A8 158 aa12.42□□□□□ -0.42
NID1-202ENST00000366595 LINC00474Q9P2X8 69 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms