RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 CLDN24A6NM45 220 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 H3BQV1 296 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 ARPC5O15511 151 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 NDUFC2O95298 119 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 APOA2P02652 100 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 S100A6P06703 90 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 COX5BP10606 129 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 AKR1C8PQ5T2L2 129 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 SCIMPQ6UWF3 145 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 CROCCP2Q86T23 111 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 OTOSQ8NHW6 89 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 PHB2Q99623 299 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 NDUFA4L2Q9NRX3 87 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 R4GMQ9 66 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 HMGXB3Q12766 1538 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 DLC1Q96QB1 1528 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 SETBP1Q9Y6X0 1596 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 USP34Q70CQ2 3546 aa-2.03□□□□□ -2.73
RNU6-54P-201ENST00000365563 YPEL1O60688 119 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 E2F6O75461 281 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 PIK3C2GO75747 1445 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 CALB1P05937 261 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 FABP2P12104 132 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 PLGLB1Q02325 96 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 COTL1Q14019 142 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 RTL8BQ17RB0 113 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 HSD17B12Q53GQ0 312 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 CCDC122Q5T0U0 273 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 HRCT1Q6UXD1 115 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 CNPY4Q8N129 248 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 DYNLRB2Q8TF09 96 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 C7orf50Q9BRJ6 194 aaKnown RBP-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 RTL8AQ9BWD3 113 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 LINC00846Q9NV44 126 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 UFC1Q9Y3C8 167 aa-2.04□□□□□ -2.74
RNU6-54P-201ENST00000365563 UHRF1BP1Q6BDS2 1440 aa-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 CD109Q6YHK3 1445 aa-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 M0R135 149 aa-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 DEFB4AO15263 64 aa-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 HMGB3O15347 200 aaKnown RBP-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 IFNA16P05015 189 aa-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 SRP9P49458 86 aaKnown RBP-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 OR51A4Q8NGJ6 313 aa-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 PATJQ8NI35 1801 aa-2.05□□□□□ -2.74
RNU6-54P-201ENST00000365563 CICQ96RK0 1608 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 TULP4Q9NRJ4 1543 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 TRBV27A0A0K0K1C4 114 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 RIIAD1A6NNX1 92 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 IQCF5A8MTL0 148 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 CCL18P55774 89 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 RPL19P84098 196 aaKnown RBP-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 AKAP14Q86UN6 197 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 USE1Q9NZ43 259 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 NDUFA12Q9UI09 145 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 PRELID3BQ9Y3B1 194 aa-2.06□□□□□ -2.74
RNU6-54P-201ENST00000365563 SHANK2Q9UPX8 1470 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 A0A087WVE0 104 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 CLPSL1A2RUU4 121 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 DEXIO95424 95 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 RPS17P08708 135 aaKnown RBP-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 CMPK1P30085 196 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 PCBD1P61457 104 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 NCALDP61601 193 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 RPS28P62857 69 aaKnown RBP-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 C9orf116Q5BN46 136 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 NUP35Q8NFH5 326 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 PTPRMP28827 1452 aa-2.07□□□□□ -2.74
RNU6-54P-201ENST00000365563 UNC80Q8N2C7 3258 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 MED23Q9ULK4 1368 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 LRRC37A3O60309 1634 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 LOC100506127A0A0U1RQW1 187 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 LINC00959A0A1B0GUT2 108 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 TRPC5OSA6NMA1 111 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 HBDP02042 147 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 UBE2D1P51668 147 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 PTH2Q96A98 100 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 BTF3L4Q96K17 158 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 SELENOSQ9BQE4 189 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 MRPL40Q9NQ50 206 aaKnown RBP-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 OTORQ9NRC9 128 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 IMP3Q9NV31 184 aaKnown RBP-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 STOML2Q9UJZ1 356 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 SNAPC4Q5SXM2 1469 aa-2.08□□□□□ -2.74
RNU6-54P-201ENST00000365563 ADCY9O60503 1353 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 TRAV30A0A087WSZ9 112 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 TRAV13-1A0A0B4J241 112 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 PPP5D1E7EU14 171 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 H3BMG7 143 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 H7C1C5 153 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 I3L3M4 83 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 PPP1R17O96001 155 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 IFNA17P01571 189 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 SDC2P34741 201 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 LCN6P62502 163 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 TMEM97Q5BJF2 176 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 CLPSL2Q6UWE3 100 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 HEPN1Q6WQI6 88 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 LINC00305Q7Z4B0 112 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 BORCS8Q96FH0 119 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms