RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 GAGE12FP0CL80 117 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 GAGE12GP0CL81 117 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 GAGE12IP0CL82 117 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 GAGE6Q13070 117 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 EBI3Q14213 229 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 SMIM20Q8N5G0 67 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 TIMM17AQ99595 171 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 CRIP2P52943 208 aaPredicted RBP10.24□□□□□ -0.77
SGMS1-202ENST00000361781 SLURP1P55000 103 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 C20orf203Q8NBC4 194 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 ZNF462Q96JM2 2506 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 RNF223E7ERA6 249 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 RPL36AP83881 106 aaKnown RBP10.24□□□□□ -0.77
SGMS1-202ENST00000361781 NFE4Q86UQ8 179 aa10.24□□□□□ -0.77
SGMS1-202ENST00000361781 RPL36ALQ969Q0 106 aaKnown RBP10.24□□□□□ -0.77
SGMS1-202ENST00000361781 TRGV4A0A0C4DH28 118 aa10.23□□□□□ -0.77
SGMS1-202ENST00000361781 TSPEAR-AS2P59090 65 aa10.23□□□□□ -0.77
SGMS1-202ENST00000361781 RHOHQ15669 191 aa10.22□□□□□ -0.77
SGMS1-202ENST00000361781 ICOSQ9Y6W8 199 aa10.22□□□□□ -0.77
SGMS1-202ENST00000361781 C19orf84I3L1E1 186 aa10.22□□□□□ -0.77
SGMS1-202ENST00000361781 Q6ZSV7 163 aa10.22□□□□□ -0.77
SGMS1-202ENST00000361781 ZNF22P17026 224 aaPredicted RBP10.22□□□□□ -0.77
SGMS1-202ENST00000361781 DOPEY1Q5JWR5 2465 aa10.22□□□□□ -0.77
SGMS1-202ENST00000361781 PIFOQ8TCI5 191 aa10.21□□□□□ -0.77
SGMS1-202ENST00000361781 PEMTQ9UBM1 199 aa10.21□□□□□ -0.77
SGMS1-202ENST00000361781 A0A0J9YXY3 114 aa10.21□□□□□ -0.77
SGMS1-202ENST00000361781 CRPP02741 224 aa10.21□□□□□ -0.77
SGMS1-202ENST00000361781 COX6B1P14854 86 aa10.21□□□□□ -0.77
SGMS1-202ENST00000361781 IGHV3-30P01768 117 aa10.21□□□□□ -0.78
SGMS1-202ENST00000361781 IGHG2P01859 326 aa10.21□□□□□ -0.78
SGMS1-202ENST00000361781 IGHV3-30-5P0DP03 117 aa10.21□□□□□ -0.78
SGMS1-202ENST00000361781 SPATA25Q9BR10 227 aa10.21□□□□□ -0.78
SGMS1-202ENST00000361781 IGHV4OR15-8A0A075B7B6 117 aa10.2□□□□□ -0.78
SGMS1-202ENST00000361781 A0A087WW49 117 aa10.2□□□□□ -0.78
SGMS1-202ENST00000361781 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
SGMS1-202ENST00000361781 U3KQE9 123 aa10.2□□□□□ -0.78
SGMS1-202ENST00000361781 COPS9Q8WXC6 57 aa10.2□□□□□ -0.78
SGMS1-202ENST00000361781 EDA2RQ9HAV5 297 aa10.2□□□□□ -0.78
SGMS1-202ENST00000361781 FBXL19-AS1Q494R0 122 aa10.2□□□□□ -0.78
SGMS1-202ENST00000361781 A0A0J9YX75 114 aa10.19□□□□□ -0.78
SGMS1-202ENST00000361781 TRAV4A0A0B4J268 109 aa10.19□□□□□ -0.78
SGMS1-202ENST00000361781 TRIAP1O43715 76 aa10.19□□□□□ -0.78
SGMS1-202ENST00000361781 INSP01308 110 aa10.19□□□□□ -0.78
SGMS1-202ENST00000361781 DEFB130BP0DP73 79 aa10.19□□□□□ -0.78
SGMS1-202ENST00000361781 DEFB130AP0DP74 79 aa10.19□□□□□ -0.78
SGMS1-202ENST00000361781 HIST1H4AP62805 103 aaKnown RBP10.19□□□□□ -0.78
SGMS1-202ENST00000361781 C11orf71Q6IPW1 123 aa10.19□□□□□ -0.78
SGMS1-202ENST00000361781 IGLV4-3A0A075B6K6 122 aa10.18□□□□□ -0.78
SGMS1-202ENST00000361781 M0QY20 66 aa10.18□□□□□ -0.78
SGMS1-202ENST00000361781 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
SGMS1-202ENST00000361781 NXPH4O95158 308 aa10.18□□□□□ -0.78
SGMS1-202ENST00000361781 HTN3P15516 51 aa10.18□□□□□ -0.78
SGMS1-202ENST00000361781 GPHB5Q86YW7 130 aa10.18□□□□□ -0.78
SGMS1-202ENST00000361781 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
SGMS1-202ENST00000361781 CDKN2A-AS1Q9UH64 79 aa10.18□□□□□ -0.78
SGMS1-202ENST00000361781 C9orf153Q5TBE3 101 aa10.17□□□□□ -0.78
SGMS1-202ENST00000361781 CLPSL2Q6UWE3 100 aa10.17□□□□□ -0.78
SGMS1-202ENST00000361781 COX8CQ7Z4L0 72 aa10.17□□□□□ -0.78
SGMS1-202ENST00000361781 DCHS2Q6V1P9 2916 aa10.17□□□□□ -0.78
SGMS1-202ENST00000361781 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
SGMS1-202ENST00000361781 UBE2D1P51668 147 aa10.17□□□□□ -0.78
SGMS1-202ENST00000361781 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
SGMS1-202ENST00000361781 IGHV4-4A0A075B6R2 117 aa10.16□□□□□ -0.78
SGMS1-202ENST00000361781 A0A096LPF7 62 aa10.16□□□□□ -0.78
SGMS1-202ENST00000361781 PSMG3-AS1Q96PY0 264 aa10.16□□□□□ -0.78
SGMS1-202ENST00000361781 TINCRA0A1B0GVN0 87 aa10.16□□□□□ -0.78
SGMS1-202ENST00000361781 C6orf226Q5I0X4 101 aa10.16□□□□□ -0.78
SGMS1-202ENST00000361781 TRBV10-2A0A0K0K1G8 114 aa10.16□□□□□ -0.78
SGMS1-202ENST00000361781 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
SGMS1-202ENST00000361781 CRYGDP07320 174 aa10.15□□□□□ -0.78
SGMS1-202ENST00000361781 MED14OSP0DP75 135 aa10.15□□□□□ -0.78
SGMS1-202ENST00000361781 FAM236AA0A1B0GUQ0 79 aa10.15□□□□□ -0.78
SGMS1-202ENST00000361781 FAM236BA0A1B0GV22 79 aa10.15□□□□□ -0.78
SGMS1-202ENST00000361781 LGALS9O00182 355 aa10.15□□□□□ -0.78
SGMS1-202ENST00000361781 BAALC-AS2P0C853 105 aa10.15□□□□□ -0.78
SGMS1-202ENST00000361781 SMCPP49901 116 aaPredicted RBP10.15□□□□□ -0.78
SGMS1-202ENST00000361781 TMEM61Q8N0U2 210 aa10.15□□□□□ -0.78
SGMS1-202ENST00000361781 Q9HAA7 133 aa10.15□□□□□ -0.79
SGMS1-202ENST00000361781 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
SGMS1-202ENST00000361781 TRBV27A0A0K0K1C4 114 aa10.14□□□□□ -0.79
SGMS1-202ENST00000361781 MUC4Q99102 2169 aa10.14□□□□□ -0.79
SGMS1-202ENST00000361781 TSHBP01222 138 aa10.14□□□□□ -0.79
SGMS1-202ENST00000361781 GATA3P23771 443 aa10.14□□□□□ -0.79
SGMS1-202ENST00000361781 NBL1P41271 181 aa10.14□□□□□ -0.79
SGMS1-202ENST00000361781 C5orf38Q86SI9 138 aa10.14□□□□□ -0.79
SGMS1-202ENST00000361781 LINC00467Q9BRT7 94 aa10.14□□□□□ -0.79
SGMS1-202ENST00000361781 NOP10Q9NPE3 64 aaKnown RBP10.14□□□□□ -0.79
SGMS1-202ENST00000361781 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
SGMS1-202ENST00000361781 NSUN5P1Q3KNT7 163 aa10.13□□□□□ -0.79
SGMS1-202ENST00000361781 LINC01356Q8N9X3 169 aa10.13□□□□□ -0.79
SGMS1-202ENST00000361781 C10orf105Q8TEF2 133 aa10.13□□□□□ -0.79
SGMS1-202ENST00000361781 A6NDX4 124 aa10.12□□□□□ -0.79
SGMS1-202ENST00000361781 H3BUA1 57 aa10.12□□□□□ -0.79
SGMS1-202ENST00000361781 CDIP1Q9H305 208 aa10.12□□□□□ -0.79
SGMS1-202ENST00000361781 CELSR1Q9NYQ6 3014 aa10.11□□□□□ -0.79
SGMS1-202ENST00000361781 RBMY1BA6NDE4 496 aaKnown RBP10.11□□□□□ -0.79
SGMS1-202ENST00000361781 RBMY1EA6NEQ0 496 aaKnown RBP10.11□□□□□ -0.79
SGMS1-202ENST00000361781 LINC01619G3V211 115 aa10.11□□□□□ -0.79
SGMS1-202ENST00000361781 RBMY1DP0C7P1 496 aaKnown RBP10.11□□□□□ -0.79
SGMS1-202ENST00000361781 RBMY1A1P0DJD3 496 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms