RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 LRRC75A-AS1Q8N1F1 130 aa10.19□□□□□ -0.78
SRGAP3-201ENST00000360413 RNF138Q8WVD3 245 aa10.19□□□□□ -0.78
SRGAP3-201ENST00000360413 PRSS33Q8NF86 280 aa10.19□□□□□ -0.78
SRGAP3-201ENST00000360413 PRO0255Q9UI72 69 aa10.19□□□□□ -0.78
SRGAP3-201ENST00000360413 IGHV3-30P01768 117 aa10.18□□□□□ -0.78
SRGAP3-201ENST00000360413 IGHV3-33P01772 117 aa10.18□□□□□ -0.78
SRGAP3-201ENST00000360413 IGHV3-30-3P0DP02 117 aa10.18□□□□□ -0.78
SRGAP3-201ENST00000360413 IGHV3-30-5P0DP03 117 aa10.18□□□□□ -0.78
SRGAP3-201ENST00000360413 LINC01548A6NM66 108 aa10.18□□□□□ -0.78
SRGAP3-201ENST00000360413 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
SRGAP3-201ENST00000360413 SCXQ7RTU7 201 aa10.17□□□□□ -0.78
SRGAP3-201ENST00000360413 IMUPQ9GZP8 106 aa10.17□□□□□ -0.78
SRGAP3-201ENST00000360413 CTRLP40313 264 aa10.17□□□□□ -0.78
SRGAP3-201ENST00000360413 BLCAPP62952 87 aa10.17□□□□□ -0.78
SRGAP3-201ENST00000360413 CPAMD8Q8IZJ3 1885 aa10.17□□□□□ -0.78
SRGAP3-201ENST00000360413 HILS1P60008 231 aa10.17□□□□□ -0.78
SRGAP3-201ENST00000360413 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 UBE2D1P51668 147 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 HRCT1Q6UXD1 115 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 ODF3L1Q8IXM7 274 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 RETNQ9HD89 108 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 FRMD6-AS1P0C7T7 363 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 MAPK1IP1LQ8NDC0 245 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 PMAIP1Q13794 54 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 DEFB112Q30KQ8 113 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 C11orf45Q8TAV5 145 aa10.16□□□□□ -0.78
SRGAP3-201ENST00000360413 CRIPAKQ8N1N5 446 aa10.15□□□□□ -0.78
SRGAP3-201ENST00000360413 COX7CP15954 63 aa10.15□□□□□ -0.78
SRGAP3-201ENST00000360413 IGHV4-59P01825 116 aa10.15□□□□□ -0.78
SRGAP3-201ENST00000360413 LINC00474Q9P2X8 69 aa10.15□□□□□ -0.79
SRGAP3-201ENST00000360413 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
SRGAP3-201ENST00000360413 IGLV2-23P01705 113 aa10.14□□□□□ -0.79
SRGAP3-201ENST00000360413 ODF3Q96PU9 254 aa10.13□□□□□ -0.79
SRGAP3-201ENST00000360413 WFDC10BQ8IUB3 73 aa10.13□□□□□ -0.79
SRGAP3-201ENST00000360413 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
SRGAP3-201ENST00000360413 SLURP1P55000 103 aa10.13□□□□□ -0.79
SRGAP3-201ENST00000360413 FAM167A-AS1Q96KT0 104 aa10.13□□□□□ -0.79
SRGAP3-201ENST00000360413 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 TP73-AS1Q9UF72 201 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 IGF2-ASQ6U949 168 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 P0DMU3 169 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 APRG1Q8IVJ8 170 aa10.12□□□□□ -0.79
SRGAP3-201ENST00000360413 IGLV11-55A0A075B6I3 123 aa10.11□□□□□ -0.79
SRGAP3-201ENST00000360413 TRIAP1O43715 76 aa10.11□□□□□ -0.79
SRGAP3-201ENST00000360413 MRPS12O15235 138 aaKnown RBP10.11□□□□□ -0.79
SRGAP3-201ENST00000360413 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
SRGAP3-201ENST00000360413 C5orf56Q8N8D9 126 aa10.11□□□□□ -0.79
SRGAP3-201ENST00000360413 FAM19A3Q7Z5A8 133 aa10.1□□□□□ -0.79
SRGAP3-201ENST00000360413 SMIM26A0A096LP01 95 aa10.1□□□□□ -0.79
SRGAP3-201ENST00000360413 DEFB136Q30KP8 78 aa10.1□□□□□ -0.79
SRGAP3-201ENST00000360413 DHRS4-AS1Q9P1J3 65 aa10.1□□□□□ -0.79
SRGAP3-201ENST00000360413 DEFB135Q30KP9 77 aa10.1□□□□□ -0.79
SRGAP3-201ENST00000360413 A0A0J9YWU9 116 aa10.1□□□□□ -0.79
SRGAP3-201ENST00000360413 NAV2Q8IVL1 2488 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 SLPIP03973 132 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 Q8N9L7 120 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 A0A087WZ39 114 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 TRBV27A0A0K0K1C4 114 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 I3L2K1 104 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 CRYGDP07320 174 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 TRBV6-1A0A0K0K1D8 114 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 PATE2Q6UY27 113 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 THSD7BQ9C0I4 1608 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 WDR87Q6ZQQ6 2873 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 ZNF503-AS2A6NEH8 195 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 IGLV3-1P01715 115 aa10.09□□□□□ -0.79
SRGAP3-201ENST00000360413 PRYO14603 147 aa10.08□□□□□ -0.8
SRGAP3-201ENST00000360413 RSPO1Q2MKA7 263 aaPredicted RBP10.08□□□□□ -0.8
SRGAP3-201ENST00000360413 PROK2Q9HC23 129 aa10.08□□□□□ -0.8
SRGAP3-201ENST00000360413 TRBV30A0A0K0K1B3 111 aa10.08□□□□□ -0.8
SRGAP3-201ENST00000360413 XGP55808 180 aa10.08□□□□□ -0.8
SRGAP3-201ENST00000360413 UBE2D3P61077 147 aa10.08□□□□□ -0.8
SRGAP3-201ENST00000360413 ABCA12Q86UK0 2595 aa10.08□□□□□ -0.8
SRGAP3-201ENST00000360413 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
SRGAP3-201ENST00000360413 K7EIM0 57 aa10.07□□□□□ -0.8
SRGAP3-201ENST00000360413 LINC00322Q6ZN03 302 aaPredicted RBP10.07□□□□□ -0.8
SRGAP3-201ENST00000360413 TLN1Q9Y490 2541 aaKnown RBP10.07□□□□□ -0.8
SRGAP3-201ENST00000360413 CCDC140Q96MF4 163 aa10.07□□□□□ -0.8
SRGAP3-201ENST00000360413 MRPS36P82909 103 aaKnown RBP10.07□□□□□ -0.8
SRGAP3-201ENST00000360413 AJUBAQ96IF1 538 aa10.07□□□□□ -0.8
SRGAP3-201ENST00000360413 HIGD2AQ9BW72 106 aa10.07□□□□□ -0.8
SRGAP3-201ENST00000360413 IBA57-AS1B1ANH7 110 aa10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 PRAC2D3DTV9 90 aa10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 IGKV1-17P01599 117 aa10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 PRR4Q16378 134 aa10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 A0A1B0GXF2 115 aa10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 C19orf71A6NCJ1 209 aa10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 ZFAND3Q9H8U3 227 aa10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 SPRY4Q9C004 299 aa10.06□□□□□ -0.8
SRGAP3-201ENST00000360413 Q8N9W7 124 aa10.05□□□□□ -0.8
SRGAP3-201ENST00000360413 IGHV4-30-2A0A087WSY4 118 aa10.05□□□□□ -0.8
SRGAP3-201ENST00000360413 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
SRGAP3-201ENST00000360413 COL4A5P29400 1685 aa10.05□□□□□ -0.8
SRGAP3-201ENST00000360413 ZFAND2AQ8N6M9 145 aa10.05□□□□□ -0.8
SRGAP3-201ENST00000360413 REG3AQ06141 175 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms