RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 NSUN5P1Q3KNT7 163 aa11.13□□□□□ -0.63
UBAP1-202ENST00000359544 FAM19A4Q96LR4 140 aa11.13□□□□□ -0.63
UBAP1-202ENST00000359544 LINC01587Q99440 93 aa11.13□□□□□ -0.63
UBAP1-202ENST00000359544 IMUPQ9GZP8 106 aa11.13□□□□□ -0.63
UBAP1-202ENST00000359544 VPREB3Q9UKI3 123 aa11.13□□□□□ -0.63
UBAP1-202ENST00000359544 F8P00451 2351 aa11.13□□□□□ -0.63
UBAP1-202ENST00000359544 F5H697 171 aa11.13□□□□□ -0.63
UBAP1-202ENST00000359544 KRTAP1-3Q8IUG1 177 aa11.13□□□□□ -0.63
UBAP1-202ENST00000359544 ATP5J2P56134 94 aa11.12□□□□□ -0.63
UBAP1-202ENST00000359544 YAE1D1Q9NRH1 226 aa11.12□□□□□ -0.63
UBAP1-202ENST00000359544 IGHV3-64A0A075B6Q5 118 aa11.11□□□□□ -0.63
UBAP1-202ENST00000359544 ACYP1P07311 99 aa11.11□□□□□ -0.63
UBAP1-202ENST00000359544 MAPK1IP1LQ8NDC0 245 aa11.11□□□□□ -0.63
UBAP1-202ENST00000359544 DEFB104AQ8WTQ1 72 aa11.11□□□□□ -0.63
UBAP1-202ENST00000359544 UBE2E1P51965 193 aa11.11□□□□□ -0.63
UBAP1-202ENST00000359544 C11orf71Q6IPW1 123 aa11.11□□□□□ -0.63
UBAP1-202ENST00000359544 SPANXCQ9NY87 97 aa11.11□□□□□ -0.63
UBAP1-202ENST00000359544 LST1O00453 97 aa11.1□□□□□ -0.63
UBAP1-202ENST00000359544 DUX3Q96PT4 197 aa11.1□□□□□ -0.63
UBAP1-202ENST00000359544 MTORP42345 2549 aa11.1□□□□□ -0.63
UBAP1-202ENST00000359544 SOCS3O14543 225 aa11.09□□□□□ -0.63
UBAP1-202ENST00000359544 Q96MF0 132 aa11.09□□□□□ -0.63
UBAP1-202ENST00000359544 SMR3AQ99954 134 aa11.09□□□□□ -0.63
UBAP1-202ENST00000359544 ZNF256Q9Y2P7 627 aaPredicted RBP11.09□□□□□ -0.63
UBAP1-202ENST00000359544 TRGV11A0A075B6L2 103 aa11.09□□□□□ -0.63
UBAP1-202ENST00000359544 LITAFQ99732 161 aa11.09□□□□□ -0.63
UBAP1-202ENST00000359544 A0A087WWL8 130 aa11.08□□□□□ -0.64
UBAP1-202ENST00000359544 PRSS2P07478 247 aa11.08□□□□□ -0.64
UBAP1-202ENST00000359544 TIMM21Q9BVV7 248 aa11.08□□□□□ -0.64
UBAP1-202ENST00000359544 ZFHX3Q15911 3703 aa11.08□□□□□ -0.64
UBAP1-202ENST00000359544 G3V318 75 aa11.08□□□□□ -0.64
UBAP1-202ENST00000359544 IGHV3-30-3P0DP02 117 aa11.08□□□□□ -0.64
UBAP1-202ENST00000359544 JPT2Q9H910 190 aa11.08□□□□□ -0.64
UBAP1-202ENST00000359544 A0A0J9YXV3 536 aa11.07□□□□□ -0.64
UBAP1-202ENST00000359544 FAM236AA0A1B0GUQ0 79 aa11.07□□□□□ -0.64
UBAP1-202ENST00000359544 FAM236BA0A1B0GV22 79 aa11.07□□□□□ -0.64
UBAP1-202ENST00000359544 OPRPNQ99935 248 aaPredicted RBP11.07□□□□□ -0.64
UBAP1-202ENST00000359544 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
UBAP1-202ENST00000359544 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
UBAP1-202ENST00000359544 MIAQ16674 131 aa11.06□□□□□ -0.64
UBAP1-202ENST00000359544 CLEC2BQ92478 149 aa11.06□□□□□ -0.64
UBAP1-202ENST00000359544 DNAJC30Q96LL9 226 aa11.06□□□□□ -0.64
UBAP1-202ENST00000359544 ATP5G1P05496 136 aa11.06□□□□□ -0.64
UBAP1-202ENST00000359544 TLN2Q9Y4G6 2542 aa11.06□□□□□ -0.64
UBAP1-202ENST00000359544 ARHGAP32A7KAX9 2087 aa11.05□□□□□ -0.64
UBAP1-202ENST00000359544 IGLV4-3A0A075B6K6 122 aa11.05□□□□□ -0.64
UBAP1-202ENST00000359544 FAM223BA6NKX1 122 aa11.05□□□□□ -0.64
UBAP1-202ENST00000359544 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
UBAP1-202ENST00000359544 FAM223AQ8IWN6 122 aa11.05□□□□□ -0.64
UBAP1-202ENST00000359544 C3orf22Q8N5N4 141 aa11.05□□□□□ -0.64
UBAP1-202ENST00000359544 CSPG4Q6UVK1 2322 aa11.05□□□□□ -0.64
UBAP1-202ENST00000359544 DEFB1P60022 68 aa11.05□□□□□ -0.64
UBAP1-202ENST00000359544 KLLNB2CW77 178 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 I3L3M4 83 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 C3orf56Q8N813 242 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 F6UB75 175 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 M0QY20 66 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 UQCRQO14949 82 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 SPXQ9BT56 116 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 ZNF580Q9UK33 172 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 MUC4Q99102 2169 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 MED13LQ71F56 2210 aa11.04□□□□□ -0.64
UBAP1-202ENST00000359544 NDUFA4O00483 81 aa11.03□□□□□ -0.64
UBAP1-202ENST00000359544 NDUFA7O95182 113 aa11.03□□□□□ -0.64
UBAP1-202ENST00000359544 TMEM61Q8N0U2 210 aa11.03□□□□□ -0.64
UBAP1-202ENST00000359544 NDUFA12Q9UI09 145 aa11.03□□□□□ -0.64
UBAP1-202ENST00000359544 SETD2Q9BYW2 2564 aaPredicted RBP11.03□□□□□ -0.64
UBAP1-202ENST00000359544 IGHV1-58A0A0C4DH39 117 aa11.03□□□□□ -0.64
UBAP1-202ENST00000359544 ADARB2-AS1A8MUL3 147 aa11.03□□□□□ -0.64
UBAP1-202ENST00000359544 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
UBAP1-202ENST00000359544 LINC00643Q86TS7 51 aa11.03□□□□□ -0.64
UBAP1-202ENST00000359544 LRRC75A-AS1Q8N1F1 130 aa11.03□□□□□ -0.64
UBAP1-202ENST00000359544 NIPBLQ6KC79 2804 aaeCLIP11.03□□□□□ -0.64
UBAP1-202ENST00000359544 TRAV8-3A0A0A6YYJ7 113 aa11.02□□□□□ -0.64
UBAP1-202ENST00000359544 MRPS36P82909 103 aaKnown RBP11.02□□□□□ -0.64
UBAP1-202ENST00000359544 ADAMTSL4-AS1Q5T5F5 129 aa11.02□□□□□ -0.65
UBAP1-202ENST00000359544 LINC00694P0DN24 101 aa11.01□□□□□ -0.65
UBAP1-202ENST00000359544 PYGO1Q9Y3Y4 419 aa11.01□□□□□ -0.65
UBAP1-202ENST00000359544 TIMM17BO60830 172 aa11.01□□□□□ -0.65
UBAP1-202ENST00000359544 UNQ9165/PRO28630Q6UXU0 137 aa11.01□□□□□ -0.65
UBAP1-202ENST00000359544 C9orf85Q96MD7 179 aa11.01□□□□□ -0.65
UBAP1-202ENST00000359544 CD28P10747 220 aa11□□□□□ -0.65
UBAP1-202ENST00000359544 LINC00526Q96FQ7 95 aa11□□□□□ -0.65
UBAP1-202ENST00000359544 SIRPDQ9H106 197 aa11□□□□□ -0.65
UBAP1-202ENST00000359544 CSDC2Q9Y534 153 aaKnown RBP11□□□□□ -0.65
UBAP1-202ENST00000359544 NF1P21359 2839 aa10.99□□□□□ -0.65
UBAP1-202ENST00000359544 TRAV41A0A0B4J266 112 aa10.99□□□□□ -0.65
UBAP1-202ENST00000359544 ID1P41134 155 aa10.99□□□□□ -0.65
UBAP1-202ENST00000359544 NPFFO15130 113 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 CXCL5P42830 114 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 Q6ZSV7 163 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 C5orf56Q8N8D9 126 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 DCANP1Q8TF63 244 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 VSIG2Q96IQ7 327 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 TRAV12-3A0A0B4J271 114 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 A0A1B0GX51 115 aa10.98□□□□□ -0.65
UBAP1-202ENST00000359544 J3KT08 172 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms