RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
DNMT1-202ENST00000359526 RPL18AQ02543 176 aaKnown RBP9.22□□□□□ -0.93
DNMT1-202ENST00000359526 PSMG3-AS1Q96PY0 264 aa9.22□□□□□ -0.93
DNMT1-202ENST00000359526 V9GYY9 64 aa9.22□□□□□ -0.93
DNMT1-202ENST00000359526 H7C423 109 aa9.22□□□□□ -0.93
DNMT1-202ENST00000359526 C14orf177Q52M58 125 aa9.22□□□□□ -0.93
DNMT1-202ENST00000359526 C1orf229Q6ZS94 237 aaPredicted RBP9.22□□□□□ -0.93
DNMT1-202ENST00000359526 DIRC1Q969H9 104 aa9.22□□□□□ -0.93
DNMT1-202ENST00000359526 C19orf84I3L1E1 186 aa9.21□□□□□ -0.93
DNMT1-202ENST00000359526 NCOA6Q14686 2063 aaPredicted RBP9.21□□□□□ -0.93
DNMT1-202ENST00000359526 IGLV10-54A0A075B6I4 117 aa9.21□□□□□ -0.94
DNMT1-202ENST00000359526 IGHV4-4A0A075B6R2 117 aa9.21□□□□□ -0.94
DNMT1-202ENST00000359526 LY6LH3BQJ8 138 aa9.21□□□□□ -0.94
DNMT1-202ENST00000359526 TRBV12-3P01733 135 aa9.21□□□□□ -0.94
DNMT1-202ENST00000359526 MP68P56378 58 aa9.21□□□□□ -0.94
DNMT1-202ENST00000359526 HIST2H2BDQ6DRA6 164 aa9.21□□□□□ -0.94
DNMT1-202ENST00000359526 C2orf91Q6ZV80 131 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 LYRM9A8MSI8 78 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 MAP6D1Q9H9H5 199 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 FAM236DA0A1B0GTK5 79 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 FAM236CP0DP71 79 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 XGP55808 180 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 Q9HAA7 133 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 SPAG11BQ08648 103 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 C14orf132Q9NPU4 83 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
DNMT1-202ENST00000359526 BRI3O95415 125 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 DEFB1P60022 68 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 IGKV2D-26A0A0A0MRZ7 120 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 IGHV4-28A0A0C4DH34 117 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 TIRAPP58753 221 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 TMEM223A0PJW6 202 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 NCR3O14931 201 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 NDUFB1O75438 58 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 HILS1P60008 231 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 SVIPQ8NHG7 77 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
DNMT1-202ENST00000359526 A0A0U1RQV1 116 aa9.18□□□□□ -0.94
DNMT1-202ENST00000359526 IGHV3-30P01768 117 aa9.18□□□□□ -0.94
DNMT1-202ENST00000359526 IGHV3-33P01772 117 aa9.18□□□□□ -0.94
DNMT1-202ENST00000359526 P0DMU3 169 aa9.18□□□□□ -0.94
DNMT1-202ENST00000359526 FAM231AP0DMU4 169 aa9.18□□□□□ -0.94
DNMT1-202ENST00000359526 FAM231CP0DMU5 169 aa9.18□□□□□ -0.94
DNMT1-202ENST00000359526 IGHV3-30-5P0DP03 117 aa9.18□□□□□ -0.94
DNMT1-202ENST00000359526 K7EQG2 157 aa9.18□□□□□ -0.94
DNMT1-202ENST00000359526 M0QXV9 152 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 MAPKAPK5-AS1Q8N8E1 139 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 CRIP1P50238 77 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 MRPL55Q7Z7F7 128 aaKnown RBP9.17□□□□□ -0.94
DNMT1-202ENST00000359526 RNF185Q96GF1 192 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 WISP2O76076 250 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 NDUFS5O43920 106 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 CFAP126Q5VTH2 177 aa9.17□□□□□ -0.94
DNMT1-202ENST00000359526 TRBV30A0A0K0K1B3 111 aa9.16□□□□□ -0.94
DNMT1-202ENST00000359526 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
DNMT1-202ENST00000359526 ZFAND2AQ8N6M9 145 aa9.16□□□□□ -0.94
DNMT1-202ENST00000359526 IGLV2-11P01706 119 aa9.16□□□□□ -0.94
DNMT1-202ENST00000359526 TRBV6-5A0A0K0K1A5 114 aa9.15□□□□□ -0.94
DNMT1-202ENST00000359526 COX7BP24311 80 aa9.15□□□□□ -0.94
DNMT1-202ENST00000359526 ATP5EP2Q5VTU8 51 aa9.15□□□□□ -0.94
DNMT1-202ENST00000359526 UFSP1Q6NVU6 142 aa9.15□□□□□ -0.94
DNMT1-202ENST00000359526 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.94
DNMT1-202ENST00000359526 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.94
DNMT1-202ENST00000359526 PTPRQQ9UMZ3 2332 aa9.15□□□□□ -0.95
DNMT1-202ENST00000359526 CEMP1Q6PRD7 247 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-202ENST00000359526 MPLKIPQ8TAP9 179 aa9.14□□□□□ -0.95
DNMT1-202ENST00000359526 C20orf173Q96LM9 149 aa9.14□□□□□ -0.95
DNMT1-202ENST00000359526 COL4A2P08572 1712 aa9.14□□□□□ -0.95
DNMT1-202ENST00000359526 NDUFC2-KCTD14E9PQ53 114 aa9.14□□□□□ -0.95
DNMT1-202ENST00000359526 MRPS12O15235 138 aaKnown RBP9.14□□□□□ -0.95
DNMT1-202ENST00000359526 Q8N6K4 173 aa9.14□□□□□ -0.95
DNMT1-202ENST00000359526 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
DNMT1-202ENST00000359526 IMUPQ9GZP8 106 aa9.14□□□□□ -0.95
DNMT1-202ENST00000359526 FAM240AA0A1B0GVK7 77 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 LINC01548A6NM66 108 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 TIMM17BO60830 172 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 MIFP14174 115 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 CRIP2P52943 208 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-202ENST00000359526 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 TRBV27A0A0K0K1C4 114 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 M0QY20 66 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 TNRC6BQ9UPQ9 1833 aaKnown RBP9.13□□□□□ -0.95
DNMT1-202ENST00000359526 IBA57-AS1B1ANH7 110 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 C2CD3Q4AC94 2353 aa9.13□□□□□ -0.95
DNMT1-202ENST00000359526 LY6G6DO95868 133 aa9.12□□□□□ -0.95
DNMT1-202ENST00000359526 Q8N976 141 aa9.12□□□□□ -0.95
DNMT1-202ENST00000359526 C16orf95Q9H693 158 aa9.12□□□□□ -0.95
DNMT1-202ENST00000359526 LINC00467Q9BRT7 94 aa9.12□□□□□ -0.95
DNMT1-202ENST00000359526 KLK12Q9UKR0 248 aa9.12□□□□□ -0.95
DNMT1-202ENST00000359526 SPG11Q96JI7 2443 aa9.12□□□□□ -0.95
DNMT1-202ENST00000359526 TRIAP1O43715 76 aa9.12□□□□□ -0.95
DNMT1-202ENST00000359526 WFDC11Q8NEX6 87 aa9.12□□□□□ -0.95
DNMT1-202ENST00000359526 LINC00694P0DN24 101 aa9.11□□□□□ -0.95
DNMT1-202ENST00000359526 LINC00310P59036 64 aa9.11□□□□□ -0.95
DNMT1-202ENST00000359526 LINC00308Q8TCZ7 52 aa9.11□□□□□ -0.95
DNMT1-202ENST00000359526 CDKN2A-AS1Q9UH64 79 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms