RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 IFITM1P13164 125 aa13.77□□□□□ -0.21
SNX11-201ENST00000359238 TTC32Q5I0X7 151 aa13.77□□□□□ -0.21
SNX11-201ENST00000359238 C4orf3Q8WVX3 66 aa13.77□□□□□ -0.21
SNX11-201ENST00000359238 C9JAW5 83 aa13.76□□□□□ -0.21
SNX11-201ENST00000359238 CRYGDP07320 174 aa13.76□□□□□ -0.21
SNX11-201ENST00000359238 MRPL53Q96EL3 112 aaKnown RBP13.76□□□□□ -0.21
SNX11-201ENST00000359238 IGLV4-69A0A075B6H9 119 aa13.76□□□□□ -0.21
SNX11-201ENST00000359238 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
SNX11-201ENST00000359238 CCDC179H3BU77 68 aa13.75□□□□□ -0.21
SNX11-201ENST00000359238 M0R381 172 aa13.75□□□□□ -0.21
SNX11-201ENST00000359238 RPL39LQ96EH5 51 aaKnown RBP13.75□□□□□ -0.21
SNX11-201ENST00000359238 SPANXA1Q9NS26 97 aa13.75□□□□□ -0.21
SNX11-201ENST00000359238 F8P00451 2351 aa13.75□□□□□ -0.21
SNX11-201ENST00000359238 DPH3P1Q9H4G8 78 aa13.75□□□□□ -0.21
SNX11-201ENST00000359238 C16orf95Q9H693 158 aa13.75□□□□□ -0.21
SNX11-201ENST00000359238 SPRY2O43597 315 aa13.74□□□□□ -0.21
SNX11-201ENST00000359238 CRLF1O75462 422 aa13.74□□□□□ -0.21
SNX11-201ENST00000359238 SHISA2Q6UWI4 295 aa13.74□□□□□ -0.21
SNX11-201ENST00000359238 RAX2Q96IS3 184 aa13.74□□□□□ -0.21
SNX11-201ENST00000359238 LINC01600Q96MT4 127 aa13.74□□□□□ -0.21
SNX11-201ENST00000359238 CITED2Q99967 270 aaPredicted RBP13.74□□□□□ -0.21
SNX11-201ENST00000359238 RPL32P62910 135 aaKnown RBP13.73□□□□□ -0.21
SNX11-201ENST00000359238 HERV-K104P63124 156 aa13.73□□□□□ -0.21
SNX11-201ENST00000359238 ZFAND2AQ8N6M9 145 aa13.73□□□□□ -0.21
SNX11-201ENST00000359238 P0DMU3 169 aa13.73□□□□□ -0.21
SNX11-201ENST00000359238 FAM231AP0DMU4 169 aa13.73□□□□□ -0.21
SNX11-201ENST00000359238 FAM231CP0DMU5 169 aa13.73□□□□□ -0.21
SNX11-201ENST00000359238 ANXA2RQ3ZCQ2 193 aa13.73□□□□□ -0.21
SNX11-201ENST00000359238 Q8N1Y9 231 aa13.73□□□□□ -0.21
SNX11-201ENST00000359238 LGALS9O00182 355 aa13.72□□□□□ -0.21
SNX11-201ENST00000359238 PPP1R17O96001 155 aa13.72□□□□□ -0.21
SNX11-201ENST00000359238 IGHV3-33P01772 117 aa13.72□□□□□ -0.21
SNX11-201ENST00000359238 TRPT1Q86TN4 253 aaKnown RBP13.72□□□□□ -0.21
SNX11-201ENST00000359238 DUSP14O95147 198 aaKnown RBP13.72□□□□□ -0.21
SNX11-201ENST00000359238 TSPEAR-AS2P59090 65 aa13.72□□□□□ -0.21
SNX11-201ENST00000359238 TENM1Q9UKZ4 2725 aa13.71□□□□□ -0.21
SNX11-201ENST00000359238 C2CD3Q4AC94 2353 aa13.71□□□□□ -0.21
SNX11-201ENST00000359238 TSHBP01222 138 aa13.71□□□□□ -0.21
SNX11-201ENST00000359238 PMVKQ15126 192 aa13.71□□□□□ -0.21
SNX11-201ENST00000359238 VWFP04275 2813 aa13.71□□□□□ -0.21
SNX11-201ENST00000359238 RPL13AP40429 203 aaKnown RBP13.7□□□□□ -0.22
SNX11-201ENST00000359238 SMIM20Q8N5G0 67 aa13.7□□□□□ -0.22
SNX11-201ENST00000359238 NTN5Q8WTR8 489 aaPredicted RBP13.7□□□□□ -0.22
SNX11-201ENST00000359238 AMELXQ99217 191 aa13.7□□□□□ -0.22
SNX11-201ENST00000359238 C14orf178Q8N769 122 aaPredicted RBP13.7□□□□□ -0.22
SNX11-201ENST00000359238 TMEM263Q8WUH6 116 aaKnown RBP13.7□□□□□ -0.22
SNX11-201ENST00000359238 A0A0B4J2C4 111 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 IGIPA6NJ69 53 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 FAM19A4Q96LR4 140 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 ODF3Q96PU9 254 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 A4D1N5 150 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 IGKV3-20P01619 116 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 ATXN8Q156A1 80 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 OR10J6PQ8NGY7 276 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 LENEPQ9Y5L5 61 aa13.69□□□□□ -0.22
SNX11-201ENST00000359238 TRAV8-4A0A0B4J246 113 aa13.68□□□□□ -0.22
SNX11-201ENST00000359238 K7EQG2 157 aa13.68□□□□□ -0.22
SNX11-201ENST00000359238 NDUFA7O95182 113 aa13.68□□□□□ -0.22
SNX11-201ENST00000359238 TMEM141Q96I45 108 aa13.68□□□□□ -0.22
SNX11-201ENST00000359238 OVOL1O14753 267 aa13.68□□□□□ -0.22
SNX11-201ENST00000359238 EIF4EBP3O60516 100 aaPredicted RBP13.68□□□□□ -0.22
SNX11-201ENST00000359238 MGPP08493 103 aa13.68□□□□□ -0.22
SNX11-201ENST00000359238 EMP1P54849 157 aa13.68□□□□□ -0.22
SNX11-201ENST00000359238 LINC01620Q4KN68 170 aa13.68□□□□□ -0.22
SNX11-201ENST00000359238 CYSRT1A8MQ03 144 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 J3QQQ9 107 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 PROK1P58294 105 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 LINC00477Q96M19 166 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 TP53TG1Q9Y2A0 90 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 JMJD1CQ15652 2540 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 TMEM170BQ5T4T1 132 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 FAM159AQ6UWV7 190 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 C15orf53Q8NAA6 179 aa13.67□□□□□ -0.22
SNX11-201ENST00000359238 MED14OSP0DP75 135 aa13.66□□□□□ -0.22
SNX11-201ENST00000359238 LGALS3P17931 250 aaKnown RBP13.66□□□□□ -0.22
SNX11-201ENST00000359238 RNASE4P34096 147 aaKnown RBP13.66□□□□□ -0.22
SNX11-201ENST00000359238 POM121L12Q8N7R1 296 aa13.66□□□□□ -0.22
SNX11-201ENST00000359238 PHLDA3Q9Y5J5 127 aa13.66□□□□□ -0.22
SNX11-201ENST00000359238 MRPL23Q16540 153 aaKnown RBP13.65□□□□□ -0.22
SNX11-201ENST00000359238 TIMM17AQ99595 171 aa13.65□□□□□ -0.22
SNX11-201ENST00000359238 CCL24O00175 119 aa13.65□□□□□ -0.22
SNX11-201ENST00000359238 S100A4P26447 101 aaKnown RBP13.65□□□□□ -0.22
SNX11-201ENST00000359238 TMEM61Q8N0U2 210 aa13.65□□□□□ -0.22
SNX11-201ENST00000359238 MUC4Q99102 2169 aa13.65□□□□□ -0.22
SNX11-201ENST00000359238 TRBV10-2A0A0K0K1G8 114 aa13.64□□□□□ -0.23
SNX11-201ENST00000359238 ZNRF2Q8NHG8 242 aa13.64□□□□□ -0.23
SNX11-201ENST00000359238 PEMTQ9UBM1 199 aa13.64□□□□□ -0.23
SNX11-201ENST00000359238 TRAV21A0A0B4J279 112 aa13.64□□□□□ -0.23
SNX11-201ENST00000359238 TEX49A0A1B0GTD5 131 aa13.64□□□□□ -0.23
SNX11-201ENST00000359238 ZNF876PQ49A33 203 aa13.64□□□□□ -0.23
SNX11-201ENST00000359238 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
SNX11-201ENST00000359238 TRAV12-2A0A075B6T6 113 aa13.63□□□□□ -0.23
SNX11-201ENST00000359238 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.63□□□□□ -0.23
SNX11-201ENST00000359238 KRTAP10-3P60369 221 aa13.63□□□□□ -0.23
SNX11-201ENST00000359238 NSUN5P1Q3KNT7 163 aa13.63□□□□□ -0.23
SNX11-201ENST00000359238 H3BMM0 161 aa13.62□□□□□ -0.23
SNX11-201ENST00000359238 GNRH2O43555 120 aa13.62□□□□□ -0.23
SNX11-201ENST00000359238 ID1P41134 155 aa13.62□□□□□ -0.23
SNX11-201ENST00000359238 UBE2WQ96B02 151 aa13.62□□□□□ -0.23
SNX11-201ENST00000359238 TEP1Q99973 2627 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms