RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ZFP2Q6ZN57 461 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 HIST1H4GQ99525 98 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 MAST4O15021 2626 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 KLLNB2CW77 178 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 S100A4P26447 101 aaKnown RBP9.34□□□□□ -0.91
GGPS1-202ENST00000358966 SPANXN1Q5VSR9 72 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 IFI27L1Q96BM0 104 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 CHCHD5Q9BSY4 110 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 C16orf95Q9H693 158 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 LENEPQ9Y5L5 61 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
GGPS1-202ENST00000358966 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
GGPS1-202ENST00000358966 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
GGPS1-202ENST00000358966 ZNF493Q6ZR52 646 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 RNF185Q96GF1 192 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 TMEM160Q9NX00 188 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 NPYP01303 97 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
GGPS1-202ENST00000358966 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 RBMY1FQ15415 496 aaKnown RBP9.33□□□□□ -0.92
GGPS1-202ENST00000358966 TMEM101Q96IK0 257 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 PKD1L1Q8TDX9 2849 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 RNASE3P12724 160 aaKnown RBP9.33□□□□□ -0.92
GGPS1-202ENST00000358966 GTSCR1Q86UQ5 136 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 WFDC10AQ9H1F0 79 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 HHLA3Q9XRX5 114 aa9.33□□□□□ -0.92
GGPS1-202ENST00000358966 CYSRT1A8MQ03 144 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 A8MWV9 139 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 J3KT08 172 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 CD7P09564 240 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 ASIPP42127 132 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 TMEM158Q8WZ71 300 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 JPT2Q9H910 190 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 MAP6D1Q9H9H5 199 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 CKS2P33552 79 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 DEFB104AQ8WTQ1 72 aa9.32□□□□□ -0.92
GGPS1-202ENST00000358966 ZNF256Q9Y2P7 627 aaPredicted RBP9.32□□□□□ -0.92
GGPS1-202ENST00000358966 MAPKAPK5-AS1Q8N8E1 139 aa9.31□□□□□ -0.92
GGPS1-202ENST00000358966 TAL2Q16559 108 aa9.31□□□□□ -0.92
GGPS1-202ENST00000358966 GATD1Q8NB37 220 aa9.31□□□□□ -0.92
GGPS1-202ENST00000358966 ODF3L2Q3SX64 289 aa9.3□□□□□ -0.92
GGPS1-202ENST00000358966 ORMDL3Q8N138 153 aa9.3□□□□□ -0.92
GGPS1-202ENST00000358966 C14orf178Q8N769 122 aaPredicted RBP9.3□□□□□ -0.92
GGPS1-202ENST00000358966 OR13C6PQ8NH95 151 aa9.3□□□□□ -0.92
GGPS1-202ENST00000358966 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
GGPS1-202ENST00000358966 HBDP02042 147 aa9.3□□□□□ -0.92
GGPS1-202ENST00000358966 EMP1P54849 157 aa9.3□□□□□ -0.92
GGPS1-202ENST00000358966 Q8N1Y9 231 aa9.29□□□□□ -0.92
GGPS1-202ENST00000358966 C15orf53Q8NAA6 179 aa9.29□□□□□ -0.92
GGPS1-202ENST00000358966 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
GGPS1-202ENST00000358966 LINC01549A6NIU2 74 aa9.29□□□□□ -0.92
GGPS1-202ENST00000358966 H3BMM0 161 aa9.29□□□□□ -0.92
GGPS1-202ENST00000358966 KLK5Q9Y337 293 aaPredicted RBP9.29□□□□□ -0.92
GGPS1-202ENST00000358966 NACAE9PAV3 2078 aa9.28□□□□□ -0.92
GGPS1-202ENST00000358966 TNFRSF6BO95407 300 aa9.28□□□□□ -0.92
GGPS1-202ENST00000358966 ZC2HC1BQ5TFG8 222 aa9.28□□□□□ -0.92
GGPS1-202ENST00000358966 HLA-DRB4P13762 266 aa9.28□□□□□ -0.92
GGPS1-202ENST00000358966 HERVK_113P63121 156 aa9.28□□□□□ -0.92
GGPS1-202ENST00000358966 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
GGPS1-202ENST00000358966 HLA-DRB4X5D2U9 266 aa9.28□□□□□ -0.92
GGPS1-202ENST00000358966 TRBV7-3A0A075B6L6 115 aa9.27□□□□□ -0.92
GGPS1-202ENST00000358966 A0A087WWL8 130 aa9.27□□□□□ -0.92
GGPS1-202ENST00000358966 NDUFA7O95182 113 aa9.27□□□□□ -0.92
GGPS1-202ENST00000358966 TCL1BO95988 128 aa9.27□□□□□ -0.92
GGPS1-202ENST00000358966 SBSPONQ8IVN8 264 aa9.27□□□□□ -0.92
GGPS1-202ENST00000358966 BAALCQ8WXS3 180 aa9.27□□□□□ -0.92
GGPS1-202ENST00000358966 ODF3Q96PU9 254 aa9.27□□□□□ -0.92
GGPS1-202ENST00000358966 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
GGPS1-202ENST00000358966 MGPP08493 103 aa9.27□□□□□ -0.93
GGPS1-202ENST00000358966 U3KQK5 164 aa9.27□□□□□ -0.93
GGPS1-202ENST00000358966 COL6A5A8TX70 2615 aa9.27□□□□□ -0.93
GGPS1-202ENST00000358966 MYMXA0A1B0GTQ4 84 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 F8WDY8 70 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 SCGB1C2P0DMR2 95 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 LEPP41159 167 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.26□□□□□ -0.93
GGPS1-202ENST00000358966 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 IGKCP01834 107 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 ZMAT4Q9H898 229 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 XCL2Q9UBD3 114 aa9.26□□□□□ -0.93
GGPS1-202ENST00000358966 IGHV3OR16-12A0A075B7B8 117 aa9.25□□□□□ -0.93
GGPS1-202ENST00000358966 UBE2D3P61077 147 aa9.25□□□□□ -0.93
GGPS1-202ENST00000358966 UBE2D2P62837 147 aa9.25□□□□□ -0.93
GGPS1-202ENST00000358966 FAM74A4Q5TZK3 123 aa9.25□□□□□ -0.93
GGPS1-202ENST00000358966 C10orf126Q8N4M7 172 aa9.25□□□□□ -0.93
GGPS1-202ENST00000358966 RPL39LQ96EH5 51 aaKnown RBP9.25□□□□□ -0.93
GGPS1-202ENST00000358966 IGHV3-16A0A0C4DH30 117 aa9.25□□□□□ -0.93
GGPS1-202ENST00000358966 IGHV1OR15-1A0A075B7D0 117 aa9.24□□□□□ -0.93
GGPS1-202ENST00000358966 A0A1B0GX51 115 aa9.24□□□□□ -0.93
GGPS1-202ENST00000358966 PF4P02776 101 aa9.24□□□□□ -0.93
GGPS1-202ENST00000358966 PRSS1P07477 247 aa9.24□□□□□ -0.93
GGPS1-202ENST00000358966 IGHV4-4A0A075B6R2 117 aa9.23□□□□□ -0.93
GGPS1-202ENST00000358966 NRACQ8N912 160 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms