RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.67□□□□□ -1.66
VPS13B-203ENST00000358544 C11orf44Q8N8P7 122 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 SERP1Q9Y6X1 66 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 NBEAL2Q6ZNJ1 2754 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 IGHV1-58A0A0C4DH39 117 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 SMIM26A0A096LP01 95 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 PRAC2D3DTV9 90 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 DEFB131AP59861 70 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 C9orf47Q6ZRZ4 202 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 RNF138Q8WVD3 245 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 COL4A3Q01955 1670 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 A0A1W2PRX2 142 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 TRBV12-3P01733 135 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 SHISA2Q6UWI4 295 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 CTSGP08311 255 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 RNF185Q96GF1 192 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 ZNRF2Q8NHG8 242 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 NKAPP1Q8N9T2 125 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 MDFICQ9P1T7 246 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 SP5Q6BEB4 398 aaPredicted RBP4.66□□□□□ -1.66
VPS13B-203ENST00000358544 WI2-2373I1.2A0A1W2PRP0 233 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 TEX22C9J3V5 150 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 H7C423 109 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 IGLV1-44P01699 117 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 RPL35AP18077 110 aaKnown RBP4.66□□□□□ -1.66
VPS13B-203ENST00000358544 UBE2E2Q96LR5 201 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 TRBV7-3A0A075B6L6 115 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 COL8A2P25067 703 aa4.66□□□□□ -1.66
VPS13B-203ENST00000358544 DSPP15924 2871 aaKnown RBP4.66□□□□□ -1.66
VPS13B-203ENST00000358544 BUB3O43684 328 aa4.65□□□□□ -1.66
VPS13B-203ENST00000358544 MYCNOSP40205 109 aa4.65□□□□□ -1.66
VPS13B-203ENST00000358544 EIF4EBP1Q13541 118 aaPredicted RBP4.65□□□□□ -1.66
VPS13B-203ENST00000358544 FAM19A5Q7Z5A7 132 aaPredicted RBP4.65□□□□□ -1.66
VPS13B-203ENST00000358544 LST1O00453 97 aa4.65□□□□□ -1.66
VPS13B-203ENST00000358544 KLK5Q9Y337 293 aaPredicted RBP4.65□□□□□ -1.66
VPS13B-203ENST00000358544 NPBQ8NG41 125 aa4.65□□□□□ -1.66
VPS13B-203ENST00000358544 FAM222AQ5U5X8 452 aa4.65□□□□□ -1.66
VPS13B-203ENST00000358544 TMEM223A0PJW6 202 aa4.65□□□□□ -1.66
VPS13B-203ENST00000358544 BLCAPP62952 87 aa4.65□□□□□ -1.66
VPS13B-203ENST00000358544 C20orf203Q8NBC4 194 aa4.65□□□□□ -1.66
VPS13B-203ENST00000358544 NREPQ16612 68 aa4.65□□□□□ -1.67
VPS13B-203ENST00000358544 RITA1Q96K30 269 aa4.65□□□□□ -1.67
VPS13B-203ENST00000358544 TENM3Q9P273 2699 aa4.65□□□□□ -1.67
VPS13B-203ENST00000358544 DNAH12Q6ZR08 3092 aa4.65□□□□□ -1.67
VPS13B-203ENST00000358544 DEFB130BP0DP73 79 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 DEFB130AP0DP74 79 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 PROP1O75360 226 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 PRSS33Q8NF86 280 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 DPH3Q96FX2 82 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 HIST2H2BCQ6DN03 193 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 HIST2H2BDQ6DRA6 164 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 IGLV3-9A0A075B6K5 115 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 K7EQD1 137 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 ZNF80P51504 273 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-203ENST00000358544 NCR3O14931 201 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 NDUFA1O15239 70 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 XCL1P47992 114 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 IGLV11-55A0A075B6I3 123 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 IGHV4-4A0A075B6R2 117 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 MBD3L4A6NDZ8 208 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-203ENST00000358544 MBD3L3A6NE82 208 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-203ENST00000358544 MBD3L5A6NJ08 208 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-203ENST00000358544 LHBP01229 141 aa4.64□□□□□ -1.67
VPS13B-203ENST00000358544 MBD3L2Q8NHZ7 208 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-203ENST00000358544 UBE2AP49459 152 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 TMEM105Q8N8V8 129 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 CFHR3Q02985 330 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 XCL2Q9UBD3 114 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 H3BUA1 57 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 SEC61GP60059 68 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 SNURFQ9Y675 71 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 TIRAPP58753 221 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 DSCR9P59020 149 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 H3BUX3 64 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 BRD3OSQ6XYD6 125 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 E7EQL1 145 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 NDUFB1O75438 58 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 URB1-AS1Q96HZ7 61 aa4.63□□□□□ -1.67
VPS13B-203ENST00000358544 HIVEP1P15822 2718 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 LY6G6EA0A0G2JKS1 128 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 TMEM256-PLSCR3K7ERE1 68 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 KAAG1Q9UBP8 84 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 U3KQA8 63 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 UBE2D3P61077 147 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 UBE2D2P62837 147 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 PIK3CD-AS1Q5SR53 167 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 LINC00308Q8TCZ7 52 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 LINC00574Q9H8X3 128 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 SAA4P35542 130 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 TRBV7-7A0A0K0K1E9 115 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 SPRY4Q9C004 299 aa4.62□□□□□ -1.67
VPS13B-203ENST00000358544 AJUBAQ96IF1 538 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 CRIP1P50238 77 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 PRO0461Q9UI25 63 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 HHLA3Q9XRX5 114 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 NSUN5P1Q3KNT7 163 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 A0A0J9YX75 114 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 IGHV7-81A0A0B4J1V7 117 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms