RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MBD6Q96DN6 1003 aa6.75□□□□□ -1.33
COL6A6-201ENST00000358511 Q6Q795 121 aa6.75□□□□□ -1.33
COL6A6-201ENST00000358511 CCL18P55774 89 aa6.75□□□□□ -1.33
COL6A6-201ENST00000358511 COL4A4P53420 1690 aaPredicted RBP6.75□□□□□ -1.33
COL6A6-201ENST00000358511 C1orf195Q5TG92 126 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 ODF3L1Q8IXM7 274 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 KIR2DL5BQ8NHK3 375 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 A0A0J9YY99 117 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 UBE2D1P51668 147 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 ABCA12Q86UK0 2595 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 UFSP1Q6NVU6 142 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 IGKV2D-26A0A0A0MRZ7 120 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 MSMBP08118 114 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 LINC00322Q6ZN03 302 aaPredicted RBP6.74□□□□□ -1.33
COL6A6-201ENST00000358511 CENPVL3A0A0U1RRI6 287 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 COX7CP15954 63 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 NFE4Q86UQ8 179 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 RITA1Q96K30 269 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 KLK5Q9Y337 293 aaPredicted RBP6.74□□□□□ -1.33
COL6A6-201ENST00000358511 C5orf38Q86SI9 138 aa6.74□□□□□ -1.33
COL6A6-201ENST00000358511 CENPFP49454 3210 aa6.73□□□□□ -1.33
COL6A6-201ENST00000358511 SPRY2O43597 315 aa6.73□□□□□ -1.33
COL6A6-201ENST00000358511 USP9XQ93008 2570 aaPredicted RBP6.73□□□□□ -1.33
COL6A6-201ENST00000358511 Q6ZQT7 251 aa6.73□□□□□ -1.33
COL6A6-201ENST00000358511 PRR30Q53SZ7 412 aaPredicted RBP6.73□□□□□ -1.33
COL6A6-201ENST00000358511 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
COL6A6-201ENST00000358511 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
COL6A6-201ENST00000358511 MAPK1IP1LQ8NDC0 245 aa6.73□□□□□ -1.33
COL6A6-201ENST00000358511 MUC22E2RYF6 1773 aaPredicted RBP6.73□□□□□ -1.33
COL6A6-201ENST00000358511 F8W735 103 aaPredicted RBP6.73□□□□□ -1.33
COL6A6-201ENST00000358511 X6R8D5 127 aa6.73□□□□□ -1.33
COL6A6-201ENST00000358511 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 ANKRD17O75179 2603 aaKnown RBP6.72□□□□□ -1.33
COL6A6-201ENST00000358511 PRSS33Q8NF86 280 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 RNF138Q8WVD3 245 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 IGHV7-81A0A0B4J1V7 117 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 IGHV3-33P01772 117 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 ANKRD11Q6UB99 2663 aaPredicted RBP6.72□□□□□ -1.33
COL6A6-201ENST00000358511 IGHV3-30P01768 117 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 IGHV3-30-5P0DP03 117 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 SERP1Q9Y6X1 66 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 LINC00694P0DN24 101 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 C10orf105Q8TEF2 133 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 RETNQ9HD89 108 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 IGKV1D-37A0A075B6S9 117 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 M0QXV9 152 aa6.72□□□□□ -1.33
COL6A6-201ENST00000358511 PRAC2D3DTV9 90 aa6.71□□□□□ -1.33
COL6A6-201ENST00000358511 ENHOQ6UWT2 76 aa6.71□□□□□ -1.33
COL6A6-201ENST00000358511 C16orf74Q96GX8 76 aa6.71□□□□□ -1.33
COL6A6-201ENST00000358511 LYRM9A8MSI8 78 aa6.71□□□□□ -1.34
COL6A6-201ENST00000358511 E7EUB6 86 aa6.71□□□□□ -1.34
COL6A6-201ENST00000358511 MRPS12O15235 138 aaKnown RBP6.71□□□□□ -1.34
COL6A6-201ENST00000358511 FAM110AQ9BQ89 295 aa6.71□□□□□ -1.34
COL6A6-201ENST00000358511 UBE2D3P61077 147 aa6.71□□□□□ -1.34
COL6A6-201ENST00000358511 A6NED7 52 aa6.71□□□□□ -1.34
COL6A6-201ENST00000358511 IGFL3Q6UXB1 125 aa6.71□□□□□ -1.34
COL6A6-201ENST00000358511 RNF223E7ERA6 249 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 BLCAPP62952 87 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 MRPS36P82909 103 aaKnown RBP6.7□□□□□ -1.34
COL6A6-201ENST00000358511 CTSZQ9UBR2 303 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 ELANEP08246 267 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 PIK3CD-AS1Q5SR53 167 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 MAPKAPK5-AS1Q8N8E1 139 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 DIRC1Q969H9 104 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 B9D2Q9BPU9 175 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 NAV2Q8IVL1 2488 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 LY6G6EA0A0G2JKS1 128 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 U3KQA8 63 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 TMEM223A0PJW6 202 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 Q96MF0 132 aa6.7□□□□□ -1.34
COL6A6-201ENST00000358511 INSL3P51460 131 aa6.69□□□□□ -1.34
COL6A6-201ENST00000358511 IGF2RP11717 2491 aa6.69□□□□□ -1.34
COL6A6-201ENST00000358511 A0A0J9YWU9 116 aa6.69□□□□□ -1.34
COL6A6-201ENST00000358511 LST1O00453 97 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 BPY2O14599 106 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 NDUFA1O15239 70 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 SPRY4Q9C004 299 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 GYPEP15421 78 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 NCR3O14931 201 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 USP9YO00507 2555 aaPredicted RBP6.68□□□□□ -1.34
COL6A6-201ENST00000358511 NCOR2Q9Y618 2525 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 PCSK5Q92824 1860 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 IGHV4-30-4P0DP06 118 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 IGHV4-31P0DP07 118 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 SPRNQ5BIV9 151 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 Q6ZPA2 131 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 TIMM17BO60830 172 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 J3QLI3 93 aa6.68□□□□□ -1.34
COL6A6-201ENST00000358511 SP5Q6BEB4 398 aaPredicted RBP6.67□□□□□ -1.34
COL6A6-201ENST00000358511 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
COL6A6-201ENST00000358511 IGHV4-61A0A0C4DH41 118 aa6.67□□□□□ -1.34
COL6A6-201ENST00000358511 ZNF80P51504 273 aaPredicted RBP6.67□□□□□ -1.34
COL6A6-201ENST00000358511 EIF4EBP1Q13541 118 aaPredicted RBP6.67□□□□□ -1.34
COL6A6-201ENST00000358511 FAM215AQ9Y5M1 114 aa6.67□□□□□ -1.34
COL6A6-201ENST00000358511 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
COL6A6-201ENST00000358511 Q8N976 141 aa6.67□□□□□ -1.34
COL6A6-201ENST00000358511 LINC00310P59036 64 aa6.67□□□□□ -1.34
COL6A6-201ENST00000358511 H7C423 109 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms