RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 TOMM6Q96B49 74 aa6.98□□□□□ -1.29
SMARCAL1-202ENST00000358207 C16orf95Q9H693 158 aa6.98□□□□□ -1.29
SMARCAL1-202ENST00000358207 IGHV1-8P0DP01 117 aa6.98□□□□□ -1.29
SMARCAL1-202ENST00000358207 UBE2E1P51965 193 aa6.98□□□□□ -1.29
SMARCAL1-202ENST00000358207 A0A0U1RQV1 116 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 Q6ZSV7 163 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 Q8TAT8 98 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 DCANP1Q8TF63 244 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 FHL2Q14192 279 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 C1orf195Q5TG92 126 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 HCP5Q6MZN7 132 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 IGKV2-40A0A087WW87 121 aaPredicted RBP6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 IGKV2D-40P01614 121 aaPredicted RBP6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 RPL18AQ02543 176 aaKnown RBP6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 SERP2Q8N6R1 65 aa6.97□□□□□ -1.29
SMARCAL1-202ENST00000358207 NSD1Q96L73 2696 aaPredicted RBP6.96□□□□□ -1.29
SMARCAL1-202ENST00000358207 ICOSQ9Y6W8 199 aa6.96□□□□□ -1.29
SMARCAL1-202ENST00000358207 EPM2AB3EWF7 344 aa6.96□□□□□ -1.3
SMARCAL1-202ENST00000358207 LST1O00453 97 aa6.96□□□□□ -1.3
SMARCAL1-202ENST00000358207 PEMTQ9UBM1 199 aa6.96□□□□□ -1.3
SMARCAL1-202ENST00000358207 TRAV8-3A0A0A6YYJ7 113 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 SUB1P53999 127 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 RNF125Q96EQ8 232 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 SMIM2Q9BVW6 85 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 NACAE9PAV3 2078 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 IGHV4-61A0A0C4DH41 118 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 TSHBP01222 138 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 PRSS2P07478 247 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 BRD3OSQ6XYD6 125 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 COX8CQ7Z4L0 72 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 IGHV4-30-2A0A087WSY4 118 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 A0A1W2PRX2 142 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 C2orf66Q6UXQ4 117 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 C9orf139Q6ZV77 190 aa6.95□□□□□ -1.3
SMARCAL1-202ENST00000358207 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 S4R3C0 116 aa6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 DNHD1Q96M86 4753 aa6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 NIPBLQ6KC79 2804 aaeCLIP6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 FAM223AQ8IWN6 122 aa6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 LINC00482Q8N8I6 264 aa6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 TMEM190Q8WZ59 177 aa6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 SIRPDQ9H106 197 aa6.94□□□□□ -1.3
SMARCAL1-202ENST00000358207 HIVEP2P31629 2446 aa6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 A0A087WVE0 104 aa6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 PLGLAQ15195 96 aa6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 DYNAPQ8N1N2 210 aa6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 KAAG1Q9UBP8 84 aa6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 IGHV4-31P0DP07 118 aa6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 VMO1Q7Z5L0 202 aa6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 FN1P02751 2386 aaKnown RBP6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 SORL1Q92673 2214 aa6.93□□□□□ -1.3
SMARCAL1-202ENST00000358207 CIRBPQ14011 172 aaKnown RBP6.92□□□□□ -1.3
SMARCAL1-202ENST00000358207 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
SMARCAL1-202ENST00000358207 I3L3M4 83 aa6.92□□□□□ -1.3
SMARCAL1-202ENST00000358207 ORMDL2Q53FV1 153 aa6.92□□□□□ -1.3
SMARCAL1-202ENST00000358207 C16orf92Q96LL3 132 aa6.92□□□□□ -1.3
SMARCAL1-202ENST00000358207 SYNJ2BPP57105 145 aa6.92□□□□□ -1.3
SMARCAL1-202ENST00000358207 SMR3AQ99954 134 aa6.92□□□□□ -1.3
SMARCAL1-202ENST00000358207 RNF223E7ERA6 249 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 BUB1B-PAK6H3BSN5 160 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 PSMB8P28062 276 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 IGFL4Q6B9Z1 124 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 TMEM167AQ8TBQ9 72 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 DEFB104AQ8WTQ1 72 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 C11orf21Q9P2W6 132 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 INAFM1C9JVW0 142 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 NBR2O15453 112 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 MRGPRG-AS1Q2M3A8 158 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 RPL39LQ96EH5 51 aaKnown RBP6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
SMARCAL1-202ENST00000358207 IGKV3D-20A0A0C4DH25 116 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 IGHV1-3A0A0C4DH29 117 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 FAM223BA6NKX1 122 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 H3BRN7 92 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 LGALS3P17931 250 aaKnown RBP6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 NPC2P61916 151 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 LMO4P61968 165 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 PVRIGQ6DKI7 326 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 ZNF833PQ6ZTB9 187 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 IGKV3D-7A0A0C4DH55 119 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 MDFIQ99750 246 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 ZNF580Q9UK33 172 aa6.9□□□□□ -1.3
SMARCAL1-202ENST00000358207 TRAV12-2A0A075B6T6 113 aa6.9□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGKV1-17P01599 117 aa6.9□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGLV1-47P01700 117 aa6.9□□□□□ -1.31
SMARCAL1-202ENST00000358207 TIRAPP58753 221 aa6.9□□□□□ -1.31
SMARCAL1-202ENST00000358207 SUMO2P61956 95 aaKnown RBP6.9□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGHV3-64A0A075B6Q5 118 aa6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 IGLV2-23P01705 113 aa6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 COX6CP09669 75 aa6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 DAZ2Q13117 558 aaKnown RBP6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 DAZ4Q86SG3 579 aaKnown RBP6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 BRK1Q8WUW1 75 aa6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 DAZ1Q9NQZ3 744 aaKnown RBP6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 DAZ3Q9NR90 486 aaKnown RBP6.89□□□□□ -1.31
SMARCAL1-202ENST00000358207 C2CD3Q4AC94 2353 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 424.6 ms