RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 SRSF9Q13242 221 aaKnown RBP eCLIP11.5□□□□□ -0.57
PHTF1-201ENST00000357783 VCX2Q9H322 139 aa11.5□□□□□ -0.57
PHTF1-201ENST00000357783 JMJD1CQ15652 2540 aa11.5□□□□□ -0.57
PHTF1-201ENST00000357783 AZU1P20160 251 aa11.5□□□□□ -0.57
PHTF1-201ENST00000357783 NFE4Q86UQ8 179 aa11.5□□□□□ -0.57
PHTF1-201ENST00000357783 LINC01006Q8NI28 216 aa11.5□□□□□ -0.57
PHTF1-201ENST00000357783 PIK3CD-AS1Q5SR53 167 aa11.49□□□□□ -0.57
PHTF1-201ENST00000357783 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
PHTF1-201ENST00000357783 LINC00467Q9BRT7 94 aa11.49□□□□□ -0.57
PHTF1-201ENST00000357783 A0A0J9YXV3 536 aa11.49□□□□□ -0.57
PHTF1-201ENST00000357783 CEMP1Q6PRD7 247 aaPredicted RBP11.49□□□□□ -0.57
PHTF1-201ENST00000357783 ANK3Q12955 4377 aaKnown RBP11.49□□□□□ -0.57
PHTF1-201ENST00000357783 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
PHTF1-201ENST00000357783 PLA2G2AP14555 144 aa11.48□□□□□ -0.57
PHTF1-201ENST00000357783 SPXQ9BT56 116 aa11.48□□□□□ -0.57
PHTF1-201ENST00000357783 TSSC4Q9Y5U2 329 aaPredicted RBP11.48□□□□□ -0.57
PHTF1-201ENST00000357783 SETXQ7Z333 2677 aaKnown RBP11.48□□□□□ -0.57
PHTF1-201ENST00000357783 IGHV3-64A0A075B6Q5 118 aa11.48□□□□□ -0.57
PHTF1-201ENST00000357783 A0A0J9YY99 117 aa11.48□□□□□ -0.57
PHTF1-201ENST00000357783 J3QQQ9 107 aa11.48□□□□□ -0.57
PHTF1-201ENST00000357783 PTH2Q96A98 100 aa11.48□□□□□ -0.57
PHTF1-201ENST00000357783 RHODO00212 210 aa11.47□□□□□ -0.57
PHTF1-201ENST00000357783 RPL24P83731 157 aaKnown RBP11.47□□□□□ -0.57
PHTF1-201ENST00000357783 IGHV3-38A0A0C4DH36 116 aa11.47□□□□□ -0.57
PHTF1-201ENST00000357783 A0A1B0GWB2 263 aa11.47□□□□□ -0.57
PHTF1-201ENST00000357783 ZNF22P17026 224 aaPredicted RBP11.47□□□□□ -0.57
PHTF1-201ENST00000357783 LGALS3P17931 250 aaKnown RBP11.47□□□□□ -0.57
PHTF1-201ENST00000357783 BEAN1Q3B7T3 259 aa11.47□□□□□ -0.57
PHTF1-201ENST00000357783 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
PHTF1-201ENST00000357783 C1orf158Q8N1D5 194 aa11.47□□□□□ -0.57
PHTF1-201ENST00000357783 TMEM223A0PJW6 202 aa11.46□□□□□ -0.57
PHTF1-201ENST00000357783 RNASE1P07998 156 aaKnown RBP11.46□□□□□ -0.57
PHTF1-201ENST00000357783 SCGB1A1P11684 91 aa11.46□□□□□ -0.57
PHTF1-201ENST00000357783 CLUHP3Q96NS8 147 aa11.46□□□□□ -0.57
PHTF1-201ENST00000357783 UNC79Q9P2D8 2635 aa11.46□□□□□ -0.57
PHTF1-201ENST00000357783 J3QKU1 62 aa11.46□□□□□ -0.58
PHTF1-201ENST00000357783 IGHV3-53P01767 116 aa11.46□□□□□ -0.58
PHTF1-201ENST00000357783 RRN3P1Q2M238 152 aa11.46□□□□□ -0.58
PHTF1-201ENST00000357783 FAM104AQ969W3 186 aa11.46□□□□□ -0.58
PHTF1-201ENST00000357783 AMELXQ99217 191 aa11.46□□□□□ -0.58
PHTF1-201ENST00000357783 RS1O15537 224 aa11.45□□□□□ -0.58
PHTF1-201ENST00000357783 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
PHTF1-201ENST00000357783 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
PHTF1-201ENST00000357783 CHCHD7Q9BUK0 85 aa11.45□□□□□ -0.58
PHTF1-201ENST00000357783 PYGO1Q9Y3Y4 419 aa11.45□□□□□ -0.58
PHTF1-201ENST00000357783 TRGV1A0A0A0MS02 117 aa11.44□□□□□ -0.58
PHTF1-201ENST00000357783 TMEM238LA0A1B0GVL6 79 aa11.44□□□□□ -0.58
PHTF1-201ENST00000357783 A6NJY4 79 aa11.44□□□□□ -0.58
PHTF1-201ENST00000357783 LEPROTO15243 131 aa11.44□□□□□ -0.58
PHTF1-201ENST00000357783 C16orf95Q9H693 158 aa11.44□□□□□ -0.58
PHTF1-201ENST00000357783 SIGMAR1Q99720 223 aa11.43□□□□□ -0.58
PHTF1-201ENST00000357783 GTSF1LQ9H1H1 148 aa11.43□□□□□ -0.58
PHTF1-201ENST00000357783 PGPEP1Q9NXJ5 209 aa11.43□□□□□ -0.58
PHTF1-201ENST00000357783 WFDC10AQ9H1F0 79 aa11.43□□□□□ -0.58
PHTF1-201ENST00000357783 FASNP49327 2511 aaKnown RBP11.42□□□□□ -0.58
PHTF1-201ENST00000357783 SLC25A29Q8N8R3 303 aa11.42□□□□□ -0.58
PHTF1-201ENST00000357783 KMT2BQ9UMN6 2715 aaPredicted RBP11.42□□□□□ -0.58
PHTF1-201ENST00000357783 APOMO95445 188 aa11.42□□□□□ -0.58
PHTF1-201ENST00000357783 UBE2D1P51668 147 aa11.42□□□□□ -0.58
PHTF1-201ENST00000357783 DNAJC30Q96LL9 226 aa11.42□□□□□ -0.58
PHTF1-201ENST00000357783 UBE2D4Q9Y2X8 147 aa11.42□□□□□ -0.58
PHTF1-201ENST00000357783 IL17DQ8TAD2 202 aa11.41□□□□□ -0.58
PHTF1-201ENST00000357783 IGHV3-30P01768 117 aa11.41□□□□□ -0.58
PHTF1-201ENST00000357783 IGHV3-30-5P0DP03 117 aa11.41□□□□□ -0.58
PHTF1-201ENST00000357783 SPANXB1Q9NS25 103 aaPredicted RBP11.41□□□□□ -0.58
PHTF1-201ENST00000357783 H3BMG7 143 aa11.4□□□□□ -0.58
PHTF1-201ENST00000357783 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
PHTF1-201ENST00000357783 Q6ZTI0 123 aa11.4□□□□□ -0.58
PHTF1-201ENST00000357783 Q6ZUT4 128 aa11.4□□□□□ -0.58
PHTF1-201ENST00000357783 SPANXA1Q9NS26 97 aa11.4□□□□□ -0.58
PHTF1-201ENST00000357783 GAGE12HA6NDE8 117 aa11.4□□□□□ -0.58
PHTF1-201ENST00000357783 F8W1H4 67 aa11.4□□□□□ -0.58
PHTF1-201ENST00000357783 MRPS36P82909 103 aaKnown RBP11.4□□□□□ -0.58
PHTF1-201ENST00000357783 ZNF418Q8TF45 676 aaPredicted RBP11.4□□□□□ -0.58
PHTF1-201ENST00000357783 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
PHTF1-201ENST00000357783 SMR3AQ99954 134 aa11.39□□□□□ -0.59
PHTF1-201ENST00000357783 RPL35AP18077 110 aaKnown RBP11.39□□□□□ -0.59
PHTF1-201ENST00000357783 CRYBA4P53673 196 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 TIMM21Q9BVV7 248 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 ADARB2-AS1A8MUL3 147 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 GIG44P09565 113 aaPredicted RBP11.38□□□□□ -0.59
PHTF1-201ENST00000357783 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 HILS1P60008 231 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 WFDC2Q14508 124 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 TMEM263Q8WUH6 116 aaKnown RBP11.38□□□□□ -0.59
PHTF1-201ENST00000357783 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 HIVEP2P31629 2446 aa11.38□□□□□ -0.59
PHTF1-201ENST00000357783 TSPAN13O95857 204 aa11.37□□□□□ -0.59
PHTF1-201ENST00000357783 MTURNQ8N3F0 131 aa11.37□□□□□ -0.59
PHTF1-201ENST00000357783 J3QR89 54 aa11.37□□□□□ -0.59
PHTF1-201ENST00000357783 IGLV1-51P01701 117 aa11.37□□□□□ -0.59
PHTF1-201ENST00000357783 NDUFA11Q86Y39 141 aa11.37□□□□□ -0.59
PHTF1-201ENST00000357783 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
PHTF1-201ENST00000357783 NOP10Q9NPE3 64 aaKnown RBP11.37□□□□□ -0.59
PHTF1-201ENST00000357783 C2CD3Q4AC94 2353 aa11.36□□□□□ -0.59
PHTF1-201ENST00000357783 A0A1B0GV72 72 aa11.36□□□□□ -0.59
PHTF1-201ENST00000357783 CFC1BP0CG36 223 aa11.36□□□□□ -0.59
PHTF1-201ENST00000357783 CFC1P0CG37 223 aa11.36□□□□□ -0.59
PHTF1-201ENST00000357783 LOC107984156A0A0G2JMH3 177 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms