RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TRAV12-2A0A075B6T6 113 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 IGHV7-81A0A0B4J1V7 117 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 KLK9Q2XQG4 91 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 DEFB104AQ8WTQ1 72 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 KLK9Q9UKQ9 250 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 FAM215AQ9Y5M1 114 aa4.97□□□□□ -1.61
TRIM38-201ENST00000357085 IGLV4-69A0A075B6H9 119 aa4.96□□□□□ -1.61
TRIM38-201ENST00000357085 RS1O15537 224 aa4.96□□□□□ -1.61
TRIM38-201ENST00000357085 LRRK2Q5S007 2527 aa4.96□□□□□ -1.61
TRIM38-201ENST00000357085 PFN2P35080 140 aa4.96□□□□□ -1.61
TRIM38-201ENST00000357085 FAM27E3Q08E93 113 aa4.96□□□□□ -1.61
TRIM38-201ENST00000357085 LINC00308Q8TCZ7 52 aa4.96□□□□□ -1.61
TRIM38-201ENST00000357085 PTPN13Q12923 2485 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 BLCAPP62952 87 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 ITLN2Q8WWU7 325 aaPredicted RBP4.96□□□□□ -1.62
TRIM38-201ENST00000357085 PKIGQ9Y2B9 76 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 ZFAND3Q9H8U3 227 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 J3QLI3 93 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 ELANEP08246 267 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 CRIP2P52943 208 aaPredicted RBP4.96□□□□□ -1.62
TRIM38-201ENST00000357085 M0QY20 66 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 A0A0J9YXV3 536 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 SND1-IT1Q9HBX3 110 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 ZFAND2AQ8N6M9 145 aa4.96□□□□□ -1.62
TRIM38-201ENST00000357085 Q6ZS46 218 aa4.95□□□□□ -1.62
TRIM38-201ENST00000357085 C9orf85Q96MD7 179 aa4.95□□□□□ -1.62
TRIM38-201ENST00000357085 C1orf195Q5TG92 126 aa4.95□□□□□ -1.62
TRIM38-201ENST00000357085 CCL21O00585 134 aa4.95□□□□□ -1.62
TRIM38-201ENST00000357085 GAS8-AS1O95177 125 aa4.95□□□□□ -1.62
TRIM38-201ENST00000357085 C14orf132Q9NPU4 83 aa4.95□□□□□ -1.62
TRIM38-201ENST00000357085 NDPQ00604 133 aa4.95□□□□□ -1.62
TRIM38-201ENST00000357085 U3KQE9 123 aa4.95□□□□□ -1.62
TRIM38-201ENST00000357085 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.95□□□□□ -1.62
TRIM38-201ENST00000357085 JMJD1CQ15652 2540 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 IGHV3-16A0A0C4DH30 117 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 SAA4P35542 130 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 K7EQD1 137 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 AMELXQ99217 191 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 UPK3BQ9BT76 320 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 IGF2RP11717 2491 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 PRB3Q04118 309 aaPredicted RBP4.94□□□□□ -1.62
TRIM38-201ENST00000357085 ZNF625Q96I27 306 aaPredicted RBP4.94□□□□□ -1.62
TRIM38-201ENST00000357085 PATE3B3GLJ2 98 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 ERC2-IT1O76042 136 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 FBXL19-AS1Q494R0 122 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 LYPD2Q6UXB3 125 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 Q8N6K4 173 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 ZNF561-AS1K7EIQ3 104 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 FUSP35637 526 aaKnown RBP eCLIP4.94□□□□□ -1.62
TRIM38-201ENST00000357085 APRG1Q8IVJ8 170 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 TOMM7Q9P0U1 55 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 TRAV7A0A075B6U4 112 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 PRAC2D3DTV9 90 aa4.94□□□□□ -1.62
TRIM38-201ENST00000357085 C6orf226Q5I0X4 101 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 RPL28P46779 137 aaKnown RBP4.93□□□□□ -1.62
TRIM38-201ENST00000357085 KHDC1LQ5JSQ8 128 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 KLK5Q9Y337 293 aaPredicted RBP4.93□□□□□ -1.62
TRIM38-201ENST00000357085 IGLV4-3A0A075B6K6 122 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 TRGV2A0A075B6R0 118 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 F8WEM9 126 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 LINC00467Q9BRT7 94 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 CTSZQ9UBR2 303 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 PRSS33Q8NF86 280 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 KIR2DL5BQ8NHK3 375 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 CCDC140Q96MF4 163 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 CXCL6P80162 114 aa4.93□□□□□ -1.62
TRIM38-201ENST00000357085 CCL24O00175 119 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 IGF1P05019 195 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 CCL19Q99731 98 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 OVOL3O00110 214 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 IGLV5-45A0A087WSX0 123 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 SPRY2O43597 315 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 DPH3Q96FX2 82 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 MSRB2Q9Y3D2 182 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 IGHV3-73A0A0B4J1V6 119 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 C20orf197Q8N268 126 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 GNRH2O43555 120 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 TSHBP01222 138 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 TSPEAR-AS2P59090 65 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 SEC61GP60059 68 aa4.92□□□□□ -1.62
TRIM38-201ENST00000357085 B4DSR2 109 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 IGKV3-20P01619 116 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 MP68P56378 58 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 IGHV3-53P01767 116 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 LINC01561Q8N1V8 128 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 C16orf74Q96GX8 76 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 TRGV1A0A0A0MS02 117 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 ATP1A1-AS1Q5TC04 95 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 E7EQL1 145 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 C5orf56Q8N8D9 126 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 DCANP1Q8TF63 244 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 A0A0U1RQV1 116 aa4.91□□□□□ -1.62
TRIM38-201ENST00000357085 TNFRSF13BO14836 293 aaPredicted RBP4.91□□□□□ -1.62
TRIM38-201ENST00000357085 TRAV23DV6A0A075B6W5 121 aa4.9□□□□□ -1.62
TRIM38-201ENST00000357085 STHQ8IWL8 128 aa4.9□□□□□ -1.62
TRIM38-201ENST00000357085 TRGV4A0A0C4DH28 118 aa4.9□□□□□ -1.62
TRIM38-201ENST00000357085 NCOR2Q9Y618 2525 aa4.9□□□□□ -1.63
TRIM38-201ENST00000357085 RNASE13Q5GAN3 156 aaKnown RBP4.9□□□□□ -1.63
TRIM38-201ENST00000357085 PLA2G2CQ5R387 149 aa4.9□□□□□ -1.63
TRIM38-201ENST00000357085 HAMPP81172 84 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms