RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 IGKV2-28A0A075B6P5 120 aa13.27□□□□□ -0.29
COL27A1-201ENST00000356083 IGKV2D-28P01615 120 aa13.27□□□□□ -0.29
COL27A1-201ENST00000356083 Q6ZS49 121 aa13.27□□□□□ -0.29
COL27A1-201ENST00000356083 DNAJC9-AS1A6NH13 148 aa13.27□□□□□ -0.29
COL27A1-201ENST00000356083 Q6ZVQ6 151 aa13.26□□□□□ -0.29
COL27A1-201ENST00000356083 WFDC2Q14508 124 aa13.25□□□□□ -0.29
COL27A1-201ENST00000356083 C16orf54Q6UWD8 224 aa13.25□□□□□ -0.29
COL27A1-201ENST00000356083 SLPIP03973 132 aa13.25□□□□□ -0.29
COL27A1-201ENST00000356083 REG3AQ06141 175 aa13.25□□□□□ -0.29
COL27A1-201ENST00000356083 C17orf82Q86X59 251 aaPredicted RBP13.25□□□□□ -0.29
COL27A1-201ENST00000356083 CXCL5P42830 114 aa13.24□□□□□ -0.29
COL27A1-201ENST00000356083 FAM222AQ5U5X8 452 aa13.24□□□□□ -0.29
COL27A1-201ENST00000356083 ALPK3Q96L96 1907 aa13.24□□□□□ -0.29
COL27A1-201ENST00000356083 A6NED7 52 aa13.24□□□□□ -0.29
COL27A1-201ENST00000356083 LYL1P12980 280 aa13.24□□□□□ -0.29
COL27A1-201ENST00000356083 XAGE1AQ9HD64 81 aa13.24□□□□□ -0.29
COL27A1-201ENST00000356083 C20orf144Q9BQM9 153 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 ZNF747Q9BV97 191 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 SIVA1O15304 175 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 RETNLBQ9BQ08 111 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 SDIM1Q6ZPB5 146 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 ODF1Q14990 250 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 Q6ZUT4 128 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 TEN1Q86WV5 123 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 ZFAND3Q9H8U3 227 aa13.23□□□□□ -0.29
COL27A1-201ENST00000356083 IGLV1-44P01699 117 aa13.22□□□□□ -0.29
COL27A1-201ENST00000356083 MYCNOSP40205 109 aa13.22□□□□□ -0.29
COL27A1-201ENST00000356083 PIEZO2Q9H5I5 2752 aa13.22□□□□□ -0.29
COL27A1-201ENST00000356083 MRPL55Q7Z7F7 128 aaKnown RBP13.22□□□□□ -0.29
COL27A1-201ENST00000356083 PLA2G1BP04054 148 aaKnown RBP13.22□□□□□ -0.29
COL27A1-201ENST00000356083 MED14OSP0DP75 135 aa13.21□□□□□ -0.29
COL27A1-201ENST00000356083 PLA2G5P39877 138 aa13.21□□□□□ -0.29
COL27A1-201ENST00000356083 LINC00482Q8N8I6 264 aa13.21□□□□□ -0.29
COL27A1-201ENST00000356083 PRAC2D3DTV9 90 aa13.21□□□□□ -0.29
COL27A1-201ENST00000356083 LENEPQ9Y5L5 61 aa13.21□□□□□ -0.3
COL27A1-201ENST00000356083 J3KT08 172 aa13.2□□□□□ -0.3
COL27A1-201ENST00000356083 CIRBP-AS1Q8TBR5 109 aa13.2□□□□□ -0.3
COL27A1-201ENST00000356083 LINC00173Q6ZV60 143 aa13.2□□□□□ -0.3
COL27A1-201ENST00000356083 RPL37AP8A6NKH3 93 aa13.2□□□□□ -0.3
COL27A1-201ENST00000356083 PIK3CD-AS1Q5SR53 167 aa13.19□□□□□ -0.3
COL27A1-201ENST00000356083 ODF3L1Q8IXM7 274 aa13.19□□□□□ -0.3
COL27A1-201ENST00000356083 IGF1P05019 195 aa13.19□□□□□ -0.3
COL27A1-201ENST00000356083 PROK2Q9HC23 129 aa13.19□□□□□ -0.3
COL27A1-201ENST00000356083 WT1P19544 449 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-201ENST00000356083 TRBV6-1A0A0K0K1D8 114 aa13.19□□□□□ -0.3
COL27A1-201ENST00000356083 IL15RAQ13261 267 aa13.18□□□□□ -0.3
COL27A1-201ENST00000356083 SPANXCQ9NY87 97 aa13.18□□□□□ -0.3
COL27A1-201ENST00000356083 SERP2Q8N6R1 65 aa13.18□□□□□ -0.3
COL27A1-201ENST00000356083 KAAG1Q9UBP8 84 aa13.18□□□□□ -0.3
COL27A1-201ENST00000356083 C10orf105Q8TEF2 133 aa13.18□□□□□ -0.3
COL27A1-201ENST00000356083 C20orf197Q8N268 126 aa13.17□□□□□ -0.3
COL27A1-201ENST00000356083 ANKHD1Q8IWZ3 2542 aaKnown RBP13.17□□□□□ -0.3
COL27A1-201ENST00000356083 LINC01545Q5VT33 79 aa13.17□□□□□ -0.3
COL27A1-201ENST00000356083 LINC00526Q96FQ7 95 aa13.17□□□□□ -0.3
COL27A1-201ENST00000356083 SLX1AQ9BQ83 275 aa13.17□□□□□ -0.3
COL27A1-201ENST00000356083 K7EIM0 57 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 INSL3P51460 131 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 TTTY13Q9BZ97 58 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 TP53TG3Q9ULZ0 132 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 UNQ9165/PRO28630Q6UXU0 137 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 CHCHD10Q8WYQ3 142 aaPredicted RBP13.16□□□□□ -0.3
COL27A1-201ENST00000356083 NFE4Q86UQ8 179 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 WFDC13Q8IUB5 93 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 UFSP1Q6NVU6 142 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 LOXL1Q08397 574 aaPredicted RBP13.16□□□□□ -0.3
COL27A1-201ENST00000356083 ENHOQ6UWT2 76 aa13.16□□□□□ -0.3
COL27A1-201ENST00000356083 MAP6D1Q9H9H5 199 aa13.15□□□□□ -0.3
COL27A1-201ENST00000356083 FXYD2P54710 66 aa13.15□□□□□ -0.3
COL27A1-201ENST00000356083 LY6LH3BQJ8 138 aa13.15□□□□□ -0.3
COL27A1-201ENST00000356083 ADORA2A-AS1P86434 159 aa13.15□□□□□ -0.3
COL27A1-201ENST00000356083 Q6ZTI0 123 aa13.15□□□□□ -0.3
COL27A1-201ENST00000356083 TRBV10-1A0A0K0K1A3 114 aa13.15□□□□□ -0.31
COL27A1-201ENST00000356083 IGHV1-58A0A0C4DH39 117 aa13.14□□□□□ -0.31
COL27A1-201ENST00000356083 POM121L12Q8N7R1 296 aa13.14□□□□□ -0.31
COL27A1-201ENST00000356083 IGLV11-55A0A075B6I3 123 aa13.14□□□□□ -0.31
COL27A1-201ENST00000356083 IGLV2-8P01709 118 aa13.14□□□□□ -0.31
COL27A1-201ENST00000356083 ZFAND2AQ8N6M9 145 aa13.14□□□□□ -0.31
COL27A1-201ENST00000356083 NDUFA11Q86Y39 141 aa13.13□□□□□ -0.31
COL27A1-201ENST00000356083 TOMM6Q96B49 74 aa13.13□□□□□ -0.31
COL27A1-201ENST00000356083 SNURFQ9Y675 71 aa13.13□□□□□ -0.31
COL27A1-201ENST00000356083 I3L2K1 104 aa13.13□□□□□ -0.31
COL27A1-201ENST00000356083 C11orf86A6NJI1 115 aa13.13□□□□□ -0.31
COL27A1-201ENST00000356083 PTH2Q96A98 100 aa13.13□□□□□ -0.31
COL27A1-201ENST00000356083 NDUFV3P56181 108 aaKnown RBP13.12□□□□□ -0.31
COL27A1-201ENST00000356083 FOXL2NBQ6ZUU3 175 aa13.12□□□□□ -0.31
COL27A1-201ENST00000356083 PLA2G2CQ5R387 149 aa13.11□□□□□ -0.31
COL27A1-201ENST00000356083 FAM30AQ9NZY2 134 aa13.11□□□□□ -0.31
COL27A1-201ENST00000356083 G3V4G9 280 aa13.11□□□□□ -0.31
COL27A1-201ENST00000356083 CCKP06307 115 aa13.1□□□□□ -0.31
COL27A1-201ENST00000356083 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
COL27A1-201ENST00000356083 FSHBP01225 129 aa13.1□□□□□ -0.31
COL27A1-201ENST00000356083 U3KQA8 63 aa13.1□□□□□ -0.31
COL27A1-201ENST00000356083 Q8N9L7 120 aa13.09□□□□□ -0.31
COL27A1-201ENST00000356083 PIEZO1Q92508 2521 aa13.09□□□□□ -0.31
COL27A1-201ENST00000356083 PLA2G2EQ9NZK7 142 aa13.09□□□□□ -0.31
COL27A1-201ENST00000356083 LINC00467Q9BRT7 94 aa13.08□□□□□ -0.31
COL27A1-201ENST00000356083 TDRG1Q3Y452 100 aa13.08□□□□□ -0.32
COL27A1-201ENST00000356083 PDE6GP18545 87 aa13.08□□□□□ -0.32
COL27A1-201ENST00000356083 A6NDX4 124 aa13.08□□□□□ -0.32
COL27A1-201ENST00000356083 PIP4P1Q86T03 277 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms