RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 LINC01587Q99440 93 aa13.11□□□□□ -0.31
HDAC10-202ENST00000349505 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
HDAC10-202ENST00000349505 M0QY20 66 aa13.1□□□□□ -0.31
HDAC10-202ENST00000349505 M0R2P5 195 aa13.1□□□□□ -0.31
HDAC10-202ENST00000349505 TP53TG1Q9Y2A0 90 aa13.1□□□□□ -0.31
HDAC10-202ENST00000349505 SPANXB1Q9NS25 103 aaPredicted RBP13.09□□□□□ -0.31
HDAC10-202ENST00000349505 KRTAP10-3P60369 221 aa13.09□□□□□ -0.31
HDAC10-202ENST00000349505 GAGE13Q4V321 117 aa13.09□□□□□ -0.31
HDAC10-202ENST00000349505 EDA2RQ9HAV5 297 aa13.09□□□□□ -0.31
HDAC10-202ENST00000349505 SDHAF1A6NFY7 115 aa13.08□□□□□ -0.32
HDAC10-202ENST00000349505 A8MWV9 139 aa13.08□□□□□ -0.32
HDAC10-202ENST00000349505 C11orf72Q8NBR9 251 aa13.08□□□□□ -0.32
HDAC10-202ENST00000349505 SPXQ9BT56 116 aa13.08□□□□□ -0.32
HDAC10-202ENST00000349505 NSD1Q96L73 2696 aaPredicted RBP13.08□□□□□ -0.32
HDAC10-202ENST00000349505 SCGB1A1P11684 91 aa13.07□□□□□ -0.32
HDAC10-202ENST00000349505 SRSF9Q13242 221 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC10-202ENST00000349505 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
HDAC10-202ENST00000349505 XCL2Q9UBD3 114 aa13.07□□□□□ -0.32
HDAC10-202ENST00000349505 IGLV4-69A0A075B6H9 119 aa13.06□□□□□ -0.32
HDAC10-202ENST00000349505 TEX48A0A1B0GUV7 120 aa13.06□□□□□ -0.32
HDAC10-202ENST00000349505 UBE2D1P51668 147 aa13.06□□□□□ -0.32
HDAC10-202ENST00000349505 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
HDAC10-202ENST00000349505 PRM2P04554 102 aa13.05□□□□□ -0.32
HDAC10-202ENST00000349505 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
HDAC10-202ENST00000349505 C1orf158Q8N1D5 194 aa13.05□□□□□ -0.32
HDAC10-202ENST00000349505 ATP6V0E2Q8NHE4 81 aa13.05□□□□□ -0.32
HDAC10-202ENST00000349505 TSHBP01222 138 aa13.04□□□□□ -0.32
HDAC10-202ENST00000349505 PF4P02776 101 aa13.04□□□□□ -0.32
HDAC10-202ENST00000349505 C19orf73Q9NVV2 129 aa13.04□□□□□ -0.32
HDAC10-202ENST00000349505 MRPL16Q9NX20 251 aaKnown RBP13.04□□□□□ -0.32
HDAC10-202ENST00000349505 LINC00482Q8N8I6 264 aa13.03□□□□□ -0.32
HDAC10-202ENST00000349505 CRLF1O75462 422 aa13.03□□□□□ -0.32
HDAC10-202ENST00000349505 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
HDAC10-202ENST00000349505 H3BMG7 143 aa13.02□□□□□ -0.32
HDAC10-202ENST00000349505 CRYBA4P53673 196 aa13.02□□□□□ -0.32
HDAC10-202ENST00000349505 TRBV20-1A0A075B6N2 111 aa13.01□□□□□ -0.33
HDAC10-202ENST00000349505 A0A0J9YY99 117 aa13.01□□□□□ -0.33
HDAC10-202ENST00000349505 RHODO00212 210 aa13.01□□□□□ -0.33
HDAC10-202ENST00000349505 HIVEP1P15822 2718 aa13.01□□□□□ -0.33
HDAC10-202ENST00000349505 NIPBLQ6KC79 2804 aaeCLIP13.01□□□□□ -0.33
HDAC10-202ENST00000349505 CFAP126Q5VTH2 177 aa13.01□□□□□ -0.33
HDAC10-202ENST00000349505 SLC25A29Q8N8R3 303 aa13.01□□□□□ -0.33
HDAC10-202ENST00000349505 FN1P02751 2386 aaKnown RBP13.01□□□□□ -0.33
HDAC10-202ENST00000349505 C2CD3Q4AC94 2353 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 I3L3M4 83 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 LGALS3P17931 250 aaKnown RBP13□□□□□ -0.33
HDAC10-202ENST00000349505 WFDC2Q14508 124 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 IL17DQ8TAD2 202 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 SIGMAR1Q99720 223 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 VCX2Q9H322 139 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 PRO0461Q9UI25 63 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 AZU1P20160 251 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
HDAC10-202ENST00000349505 LEPROTO15243 131 aa12.99□□□□□ -0.33
HDAC10-202ENST00000349505 C1QTNF4Q9BXJ3 329 aa12.99□□□□□ -0.33
HDAC10-202ENST00000349505 NACAE9PAV3 2078 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 J3QQQ9 107 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 RS1O15537 224 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 GIG44P09565 113 aaPredicted RBP12.98□□□□□ -0.33
HDAC10-202ENST00000349505 UBE2D3P61077 147 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 UBE2D2P62837 147 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
HDAC10-202ENST00000349505 PLEKHB2Q96CS7 222 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 SPATA25Q9BR10 227 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 IGHV3-73A0A0B4J1V6 119 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 C20orf203Q8NBC4 194 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 WFDC10AQ9H1F0 79 aa12.98□□□□□ -0.33
HDAC10-202ENST00000349505 INSL3P51460 131 aa12.97□□□□□ -0.33
HDAC10-202ENST00000349505 RPL39P62891 51 aaKnown RBP12.97□□□□□ -0.33
HDAC10-202ENST00000349505 PYGO1Q9Y3Y4 419 aa12.97□□□□□ -0.33
HDAC10-202ENST00000349505 IGHV3-30P01768 117 aa12.96□□□□□ -0.33
HDAC10-202ENST00000349505 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.33
HDAC10-202ENST00000349505 GAGE12HA6NDE8 117 aa12.96□□□□□ -0.34
HDAC10-202ENST00000349505 TMEM238C9JI98 176 aa12.96□□□□□ -0.34
HDAC10-202ENST00000349505 TSPAN13O95857 204 aa12.96□□□□□ -0.34
HDAC10-202ENST00000349505 IGHV3-53P01767 116 aa12.96□□□□□ -0.34
HDAC10-202ENST00000349505 ETDBQ3ZM63 59 aa12.96□□□□□ -0.34
HDAC10-202ENST00000349505 TMEM223A0PJW6 202 aa12.95□□□□□ -0.34
HDAC10-202ENST00000349505 TNFRSF18Q9Y5U5 241 aa12.95□□□□□ -0.34
HDAC10-202ENST00000349505 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
HDAC10-202ENST00000349505 C10orf126Q8N4M7 172 aa12.94□□□□□ -0.34
HDAC10-202ENST00000349505 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
HDAC10-202ENST00000349505 DNAJC30Q96LL9 226 aa12.94□□□□□ -0.34
HDAC10-202ENST00000349505 P0DMU3 169 aa12.94□□□□□ -0.34
HDAC10-202ENST00000349505 FAM231AP0DMU4 169 aa12.94□□□□□ -0.34
HDAC10-202ENST00000349505 FAM231CP0DMU5 169 aa12.94□□□□□ -0.34
HDAC10-202ENST00000349505 RPL35AP18077 110 aaKnown RBP12.94□□□□□ -0.34
HDAC10-202ENST00000349505 DEFB104AQ8WTQ1 72 aa12.94□□□□□ -0.34
HDAC10-202ENST00000349505 APOMO95445 188 aa12.93□□□□□ -0.34
HDAC10-202ENST00000349505 Q6ZSN1 163 aa12.93□□□□□ -0.34
HDAC10-202ENST00000349505 CSNK1G2-AS1Q8NCQ2 148 aa12.93□□□□□ -0.34
HDAC10-202ENST00000349505 C16orf74Q96GX8 76 aa12.93□□□□□ -0.34
HDAC10-202ENST00000349505 PRO1854Q9UHT4 67 aa12.93□□□□□ -0.34
HDAC10-202ENST00000349505 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.92□□□□□ -0.34
HDAC10-202ENST00000349505 DAZ2Q13117 558 aaKnown RBP12.92□□□□□ -0.34
HDAC10-202ENST00000349505 C9orf66Q5T8R8 295 aa12.92□□□□□ -0.34
HDAC10-202ENST00000349505 CITED1Q99966 193 aa12.92□□□□□ -0.34
HDAC10-202ENST00000349505 TRGV1A0A0A0MS02 117 aa12.92□□□□□ -0.34
HDAC10-202ENST00000349505 LOC107984156A0A0G2JMH3 177 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms