RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 KALRNO60229 2985 aa7.61□□□□□ -1.19
CHRNA1-202ENST00000348749 ADARB2-AS1A8MUL3 147 aa7.61□□□□□ -1.19
CHRNA1-202ENST00000348749 K7EMT4 169 aa7.61□□□□□ -1.19
CHRNA1-202ENST00000348749 OR13C6PQ8NH95 151 aa7.61□□□□□ -1.19
CHRNA1-202ENST00000348749 SMG1Q96Q15 3661 aaKnown RBP7.61□□□□□ -1.19
CHRNA1-202ENST00000348749 C9orf85Q96MD7 179 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 ADGRG4Q8IZF6 3080 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 IGHG2P01859 326 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 DEFB1P60022 68 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 CDSNQ15517 529 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 GAGE2AQ6NT46 116 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 UNQ9165/PRO28630Q6UXU0 137 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 DAND5Q8N907 189 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 VSIG2Q96IQ7 327 aa7.6□□□□□ -1.19
CHRNA1-202ENST00000348749 ATOX1O00244 68 aa7.59□□□□□ -1.19
CHRNA1-202ENST00000348749 COX7A2LO14548 114 aa7.59□□□□□ -1.19
CHRNA1-202ENST00000348749 RPL11P62913 178 aaKnown RBP7.59□□□□□ -1.19
CHRNA1-202ENST00000348749 DAZ1Q9NQZ3 744 aaKnown RBP7.59□□□□□ -1.19
CHRNA1-202ENST00000348749 KLK5Q9Y337 293 aaPredicted RBP7.59□□□□□ -1.19
CHRNA1-202ENST00000348749 BSNQ9UPA5 3926 aa7.59□□□□□ -1.19
CHRNA1-202ENST00000348749 AKAP13Q12802 2813 aa7.59□□□□□ -1.19
CHRNA1-202ENST00000348749 F6UB75 175 aa7.59□□□□□ -1.2
CHRNA1-202ENST00000348749 FAM104AQ969W3 186 aa7.59□□□□□ -1.2
CHRNA1-202ENST00000348749 CITED2Q99967 270 aaPredicted RBP7.59□□□□□ -1.2
CHRNA1-202ENST00000348749 DMXL2Q8TDJ6 3036 aa7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 TLN1Q9Y490 2541 aaKnown RBP7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 TINCRA0A1B0GVN0 87 aa7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 TRACP01848 142 aa7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 CD28P10747 220 aa7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 FAM74A4Q5TZK3 123 aa7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 DUX5Q96PT3 197 aa7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 RHPN1-AS1Q9BWJ2 59 aa7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 BPESC1Q9GZL8 116 aa7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 PRRC2AP48634 2157 aaKnown RBP7.58□□□□□ -1.2
CHRNA1-202ENST00000348749 TRAV25A0A0B4J276 109 aa7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 IGHV3-16A0A0C4DH30 117 aa7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 DAZ2Q13117 558 aaKnown RBP7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 BEAN1Q3B7T3 259 aa7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 FAM222AQ5U5X8 452 aa7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 DAZ4Q86SG3 579 aaKnown RBP7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 DAZ3Q9NR90 486 aaKnown RBP7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 ZFYVE26Q68DK2 2539 aa7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 NPC2P61916 151 aa7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 RNF152Q8N8N0 203 aa7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 EDA2RQ9HAV5 297 aa7.57□□□□□ -1.2
CHRNA1-202ENST00000348749 A6NDX4 124 aa7.56□□□□□ -1.2
CHRNA1-202ENST00000348749 IGLV1-40P01703 118 aa7.56□□□□□ -1.2
CHRNA1-202ENST00000348749 TRBV12-3P01733 135 aa7.56□□□□□ -1.2
CHRNA1-202ENST00000348749 INAFM2P0DMQ5 153 aa7.56□□□□□ -1.2
CHRNA1-202ENST00000348749 TMEM258P61165 79 aa7.56□□□□□ -1.2
CHRNA1-202ENST00000348749 PTPRQQ9UMZ3 2332 aa7.56□□□□□ -1.2
CHRNA1-202ENST00000348749 CEP295Q9C0D2 2601 aa7.55□□□□□ -1.2
CHRNA1-202ENST00000348749 A0A1W2PPR1 153 aa7.55□□□□□ -1.2
CHRNA1-202ENST00000348749 NDUFA1O15239 70 aa7.55□□□□□ -1.2
CHRNA1-202ENST00000348749 UBTD1Q9HAC8 227 aa7.55□□□□□ -1.2
CHRNA1-202ENST00000348749 TACC2O95359 2948 aa7.55□□□□□ -1.2
CHRNA1-202ENST00000348749 SETXQ7Z333 2677 aaKnown RBP7.55□□□□□ -1.2
CHRNA1-202ENST00000348749 TIRAPP58753 221 aa7.55□□□□□ -1.2
CHRNA1-202ENST00000348749 C22orf24Q9Y442 160 aa7.55□□□□□ -1.2
CHRNA1-202ENST00000348749 ASPMQ8IZT6 3477 aa7.54□□□□□ -1.2
CHRNA1-202ENST00000348749 hADV29S1A0JD25 119 aa7.54□□□□□ -1.2
CHRNA1-202ENST00000348749 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
CHRNA1-202ENST00000348749 BAALC-AS2P0C853 105 aa7.54□□□□□ -1.2
CHRNA1-202ENST00000348749 PF4V1P10720 104 aa7.54□□□□□ -1.2
CHRNA1-202ENST00000348749 TRAV12-3A0A0B4J271 114 aa7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 RPL18AQ02543 176 aaKnown RBP7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 CFHR3Q02985 330 aa7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 CIRBPQ14011 172 aaKnown RBP7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 LINC00308Q8TCZ7 52 aa7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 DPH3Q96FX2 82 aa7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 IGHV3OR16-10A0A075B7F0 116 aa7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 A8MZ25 164 aa7.53□□□□□ -1.2
CHRNA1-202ENST00000348749 ASH1LQ9NR48 2969 aaKnown RBP7.52□□□□□ -1.21
CHRNA1-202ENST00000348749 SNRPD3P62318 126 aaKnown RBP7.52□□□□□ -1.21
CHRNA1-202ENST00000348749 ZNF415Q09FC8 603 aa7.52□□□□□ -1.21
CHRNA1-202ENST00000348749 UPK3BQ9BT76 320 aa7.52□□□□□ -1.21
CHRNA1-202ENST00000348749 ATMQ13315 3056 aa7.52□□□□□ -1.21
CHRNA1-202ENST00000348749 IGHV1OR15-1A0A075B7D0 117 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 IGLV5-45A0A087WSX0 123 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 IGHV3-11P01762 117 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 PIMREGQ9BSJ6 248 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 FLNBO75369 2602 aaKnown RBP7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 SERP2Q8N6R1 65 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 CYSTM1Q9H1C7 97 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 GCN1Q92616 2671 aaKnown RBP7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 IGF2RP11717 2491 aa7.51□□□□□ -1.21
CHRNA1-202ENST00000348749 HRNRQ86YZ3 2850 aaPredicted RBP7.5□□□□□ -1.21
CHRNA1-202ENST00000348749 H3BUX3 64 aa7.5□□□□□ -1.21
CHRNA1-202ENST00000348749 Q6JHZ5 121 aa7.5□□□□□ -1.21
CHRNA1-202ENST00000348749 DCHS2Q6V1P9 2916 aa7.5□□□□□ -1.21
CHRNA1-202ENST00000348749 RNASE13Q5GAN3 156 aaKnown RBP7.5□□□□□ -1.21
CHRNA1-202ENST00000348749 Q8N2B8 174 aa7.5□□□□□ -1.21
CHRNA1-202ENST00000348749 CHCHD7Q9BUK0 85 aa7.5□□□□□ -1.21
CHRNA1-202ENST00000348749 PRORYQ9H606 182 aa7.5□□□□□ -1.21
CHRNA1-202ENST00000348749 IGKV3-7A0A075B6H7 116 aa7.49□□□□□ -1.21
CHRNA1-202ENST00000348749 K7EQG2 157 aa7.49□□□□□ -1.21
CHRNA1-202ENST00000348749 MALP21145 153 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms