RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 OPRPNQ99935 248 aaPredicted RBP14.67□□□□□ -0.06
CHRNA3-202ENST00000348639 PYGO1Q9Y3Y4 419 aa14.67□□□□□ -0.06
CHRNA3-202ENST00000348639 FOSL1P15407 271 aa14.66□□□□□ -0.06
CHRNA3-202ENST00000348639 UBE2V1Q13404 147 aa14.66□□□□□ -0.06
CHRNA3-202ENST00000348639 OR4C5Q8NGB2 326 aa14.66□□□□□ -0.06
CHRNA3-202ENST00000348639 C1QTNF4Q9BXJ3 329 aa14.66□□□□□ -0.06
CHRNA3-202ENST00000348639 IGLV4-3A0A075B6K6 122 aa14.66□□□□□ -0.06
CHRNA3-202ENST00000348639 H3BRM9 83 aa14.66□□□□□ -0.06
CHRNA3-202ENST00000348639 NOTCH3Q9UM47 2321 aa14.65□□□□□ -0.06
CHRNA3-202ENST00000348639 CRLF1O75462 422 aa14.65□□□□□ -0.06
CHRNA3-202ENST00000348639 HERVK_113P61574 105 aa14.65□□□□□ -0.06
CHRNA3-202ENST00000348639 NFE4Q86UQ8 179 aa14.65□□□□□ -0.06
CHRNA3-202ENST00000348639 ZNRF2Q8NHG8 242 aa14.65□□□□□ -0.06
CHRNA3-202ENST00000348639 GCSHP23434 173 aa14.65□□□□□ -0.06
CHRNA3-202ENST00000348639 VAMP3Q15836 100 aa14.65□□□□□ -0.06
CHRNA3-202ENST00000348639 TAL2Q16559 108 aa14.65□□□□□ -0.06
CHRNA3-202ENST00000348639 DAZ2Q13117 558 aaKnown RBP14.64□□□□□ -0.07
CHRNA3-202ENST00000348639 CSNK1G2-AS1Q8NCQ2 148 aa14.64□□□□□ -0.07
CHRNA3-202ENST00000348639 TM2D2Q9BX73 214 aa14.64□□□□□ -0.07
CHRNA3-202ENST00000348639 PTTG1IPP53801 180 aa14.63□□□□□ -0.07
CHRNA3-202ENST00000348639 Q6ZTI0 123 aa14.63□□□□□ -0.07
CHRNA3-202ENST00000348639 CEND1Q8N111 149 aa14.63□□□□□ -0.07
CHRNA3-202ENST00000348639 VCX2Q9H322 139 aa14.63□□□□□ -0.07
CHRNA3-202ENST00000348639 CCL25O15444 150 aa14.63□□□□□ -0.07
CHRNA3-202ENST00000348639 FXYD2P54710 66 aa14.63□□□□□ -0.07
CHRNA3-202ENST00000348639 C16orf74Q96GX8 76 aa14.63□□□□□ -0.07
CHRNA3-202ENST00000348639 CHCHD7Q9BUK0 85 aa14.63□□□□□ -0.07
CHRNA3-202ENST00000348639 CRYBA4P53673 196 aa14.62□□□□□ -0.07
CHRNA3-202ENST00000348639 TMEM170BQ5T4T1 132 aa14.62□□□□□ -0.07
CHRNA3-202ENST00000348639 ZNF479Q96JC4 524 aa14.62□□□□□ -0.07
CHRNA3-202ENST00000348639 TRAV4A0A0B4J268 109 aa14.61□□□□□ -0.07
CHRNA3-202ENST00000348639 PLAC8L1A1L4L8 177 aa14.61□□□□□ -0.07
CHRNA3-202ENST00000348639 COTL1Q14019 142 aa14.61□□□□□ -0.07
CHRNA3-202ENST00000348639 FAM104AQ969W3 186 aa14.61□□□□□ -0.07
CHRNA3-202ENST00000348639 NOP10Q9NPE3 64 aaKnown RBP14.61□□□□□ -0.07
CHRNA3-202ENST00000348639 C9orf118A6NHY6 69 aa14.6□□□□□ -0.07
CHRNA3-202ENST00000348639 ZNF815PA8K554 130 aa14.6□□□□□ -0.07
CHRNA3-202ENST00000348639 AMELXQ99217 191 aa14.6□□□□□ -0.07
CHRNA3-202ENST00000348639 K7EP13 123 aa14.59□□□□□ -0.07
CHRNA3-202ENST00000348639 PHLDA1Q8WV24 401 aaPredicted RBP14.59□□□□□ -0.07
CHRNA3-202ENST00000348639 SPANXA1Q9NS26 97 aa14.59□□□□□ -0.07
CHRNA3-202ENST00000348639 VWFP04275 2813 aa14.59□□□□□ -0.07
CHRNA3-202ENST00000348639 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.59□□□□□ -0.07
CHRNA3-202ENST00000348639 SPATA3Q8NHX4 192 aa14.59□□□□□ -0.07
CHRNA3-202ENST00000348639 HIST1H4GQ99525 98 aa14.59□□□□□ -0.07
CHRNA3-202ENST00000348639 TENM1Q9UKZ4 2725 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 IGHV3-38A0A0C4DH36 116 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 TRBV10-1A0A0K0K1A3 114 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 SMIM13P0DJ93 91 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 AMMECR1LQ6DCA0 310 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 UBE2D4Q9Y2X8 147 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 TRBV7-3A0A075B6L6 115 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 INSL3P51460 131 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 RRN3P1Q2M238 152 aa14.58□□□□□ -0.08
CHRNA3-202ENST00000348639 K7EQD1 137 aa14.57□□□□□ -0.08
CHRNA3-202ENST00000348639 CEMP1Q6PRD7 247 aaPredicted RBP14.57□□□□□ -0.08
CHRNA3-202ENST00000348639 OVOL2Q9BRP0 275 aa14.57□□□□□ -0.08
CHRNA3-202ENST00000348639 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.56□□□□□ -0.08
CHRNA3-202ENST00000348639 A0A0J9YXV3 536 aa14.56□□□□□ -0.08
CHRNA3-202ENST00000348639 TMEM223A0PJW6 202 aa14.56□□□□□ -0.08
CHRNA3-202ENST00000348639 IGKV2-29A2NJV5 120 aaPredicted RBP14.56□□□□□ -0.08
CHRNA3-202ENST00000348639 ZNF22P17026 224 aaPredicted RBP14.56□□□□□ -0.08
CHRNA3-202ENST00000348639 RPL36AP83881 106 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-202ENST00000348639 SCGB1D4Q6XE38 83 aa14.55□□□□□ -0.08
CHRNA3-202ENST00000348639 RPL36ALQ969Q0 106 aaKnown RBP14.55□□□□□ -0.08
CHRNA3-202ENST00000348639 RAB37Q96AX2 223 aa14.55□□□□□ -0.08
CHRNA3-202ENST00000348639 MRPS36P82909 103 aaKnown RBP14.54□□□□□ -0.08
CHRNA3-202ENST00000348639 SLC25A29Q8N8R3 303 aa14.54□□□□□ -0.08
CHRNA3-202ENST00000348639 H3BUT2 72 aa14.54□□□□□ -0.08
CHRNA3-202ENST00000348639 CIDEAO60543 219 aa14.54□□□□□ -0.08
CHRNA3-202ENST00000348639 TSPEAR-AS2P59090 65 aa14.54□□□□□ -0.08
CHRNA3-202ENST00000348639 C9orf66Q5T8R8 295 aa14.54□□□□□ -0.08
CHRNA3-202ENST00000348639 PLEKHB2Q96CS7 222 aa14.54□□□□□ -0.08
CHRNA3-202ENST00000348639 J3QQQ9 107 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 NHP2Q9NX24 153 aaKnown RBP14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 F8P00451 2351 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 TRGV2A0A075B6R0 118 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 GAGE12BA1L429 117 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 LEPROTO15243 131 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 GAGE7O76087 117 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 GAGE12FP0CL80 117 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 GAGE12GP0CL81 117 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 GAGE12IP0CL82 117 aa14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 DAZ4Q86SG3 579 aaKnown RBP14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 DAZ3Q9NR90 486 aaKnown RBP14.53□□□□□ -0.08
CHRNA3-202ENST00000348639 CITED1Q99966 193 aa14.52□□□□□ -0.09
CHRNA3-202ENST00000348639 ATRQ13535 2644 aa14.51□□□□□ -0.09
CHRNA3-202ENST00000348639 TIMM21Q9BVV7 248 aa14.51□□□□□ -0.09
CHRNA3-202ENST00000348639 K7ERJ3 54 aa14.51□□□□□ -0.09
CHRNA3-202ENST00000348639 LGALS3P17931 250 aaKnown RBP14.51□□□□□ -0.09
CHRNA3-202ENST00000348639 UBE2D3P61077 147 aa14.51□□□□□ -0.09
CHRNA3-202ENST00000348639 UBE2D2P62837 147 aa14.51□□□□□ -0.09
CHRNA3-202ENST00000348639 RNASE13Q5GAN3 156 aaKnown RBP14.51□□□□□ -0.09
CHRNA3-202ENST00000348639 A0A0J9YY99 117 aa14.5□□□□□ -0.09
CHRNA3-202ENST00000348639 Q6ZUT4 128 aa14.5□□□□□ -0.09
CHRNA3-202ENST00000348639 NAA38Q9BRA0 125 aaKnown RBP14.5□□□□□ -0.09
CHRNA3-202ENST00000348639 TINCRA0A1B0GVN0 87 aa14.49□□□□□ -0.09
CHRNA3-202ENST00000348639 A0A1W2PPM0 123 aa14.49□□□□□ -0.09
CHRNA3-202ENST00000348639 TEP1Q99973 2627 aaKnown RBP14.49□□□□□ -0.09
CHRNA3-202ENST00000348639 TRBV6-4A0A1B0GX49 114 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms