RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.29□□□□□ -0.66e-7■■■■□ 21
LMNA-201ENST00000347559 NDUFA4O00483 81 aa11.29□□□□□ -0.6
LMNA-201ENST00000347559 J3KT08 172 aa11.29□□□□□ -0.6
LMNA-201ENST00000347559 MRPS36P82909 103 aaKnown RBP11.29□□□□□ -0.6
LMNA-201ENST00000347559 DCANP1Q8TF63 244 aa11.29□□□□□ -0.6
LMNA-201ENST00000347559 CITED2Q99967 270 aaPredicted RBP11.29□□□□□ -0.6
LMNA-201ENST00000347559 PROK1P58294 105 aa11.29□□□□□ -0.6
LMNA-201ENST00000347559 C5orf47Q569G3 176 aa11.29□□□□□ -0.6
LMNA-201ENST00000347559 C5orf56Q8N8D9 126 aa11.29□□□□□ -0.6
LMNA-201ENST00000347559 hADV29S1A0JD25 119 aa11.28□□□□□ -0.6
LMNA-201ENST00000347559 KLRB1Q12918 225 aa11.28□□□□□ -0.6
LMNA-201ENST00000347559 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
LMNA-201ENST00000347559 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
LMNA-201ENST00000347559 PF4V1P10720 104 aa11.28□□□□□ -0.6
LMNA-201ENST00000347559 FAM223BA6NKX1 122 aa11.27□□□□□ -0.6
LMNA-201ENST00000347559 BAALC-AS2P0C853 105 aa11.27□□□□□ -0.6
LMNA-201ENST00000347559 FAM223AQ8IWN6 122 aa11.27□□□□□ -0.6
LMNA-201ENST00000347559 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.61
LMNA-201ENST00000347559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
LMNA-201ENST00000347559 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
LMNA-201ENST00000347559 KNCNA6PVL3 124 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 LY6DQ14210 128 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 FAM104AQ969W3 186 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 TTC28Q96AY4 2481 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 Q8N2B8 174 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 COX7CP15954 63 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 KLK9Q2XQG4 91 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 Q9UF83 564 aa11.26□□□□□ -0.61
LMNA-201ENST00000347559 Q8NA96 180 aa11.25□□□□□ -0.61
LMNA-201ENST00000347559 COX7A2LO14548 114 aa11.25□□□□□ -0.61
LMNA-201ENST00000347559 CDKN2A-AS1Q9UH64 79 aa11.25□□□□□ -0.61
LMNA-201ENST00000347559 CELSR1Q9NYQ6 3014 aa11.25□□□□□ -0.61
LMNA-201ENST00000347559 HRNRQ86YZ3 2850 aaPredicted RBP11.25□□□□□ -0.61
LMNA-201ENST00000347559 TIRAPP58753 221 aa11.24□□□□□ -0.61
LMNA-201ENST00000347559 CIRBPQ14011 172 aaKnown RBP11.24□□□□□ -0.61
LMNA-201ENST00000347559 LY6EQ16553 131 aa11.24□□□□□ -0.61
LMNA-201ENST00000347559 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
LMNA-201ENST00000347559 Q9HAA7 133 aa11.24□□□□□ -0.61
LMNA-201ENST00000347559 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
LMNA-201ENST00000347559 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
LMNA-201ENST00000347559 LRRC75A-AS1Q8N1F1 130 aa11.23□□□□□ -0.61
LMNA-201ENST00000347559 LINC00308Q8TCZ7 52 aa11.23□□□□□ -0.61
LMNA-201ENST00000347559 Q9H8V8 135 aa11.23□□□□□ -0.61
LMNA-201ENST00000347559 HOXD3P31249 432 aaPredicted RBP11.23□□□□□ -0.61
LMNA-201ENST00000347559 DOPEY2Q9Y3R5 2298 aa11.23□□□□□ -0.61
LMNA-201ENST00000347559 CYSTM1Q9H1C7 97 aa11.22□□□□□ -0.61
LMNA-201ENST00000347559 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
LMNA-201ENST00000347559 PTPRQQ9UMZ3 2332 aa11.22□□□□□ -0.61
LMNA-201ENST00000347559 TINCRA0A1B0GVN0 87 aa11.22□□□□□ -0.61
LMNA-201ENST00000347559 PYGO1Q9Y3Y4 419 aa11.22□□□□□ -0.61
LMNA-201ENST00000347559 MOB4Q9Y3A3 225 aa11.22□□□□□ -0.61
LMNA-201ENST00000347559 BSNQ9UPA5 3926 aa11.21□□□□□ -0.61
LMNA-201ENST00000347559 IGHG2P01859 326 aa11.21□□□□□ -0.61
LMNA-201ENST00000347559 BRD3OSQ6XYD6 125 aa11.21□□□□□ -0.61
LMNA-201ENST00000347559 IGKV3D-7A0A0C4DH55 119 aa11.21□□□□□ -0.62
LMNA-201ENST00000347559 PRM2P04554 102 aa11.21□□□□□ -0.62
LMNA-201ENST00000347559 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.62
LMNA-201ENST00000347559 PEMTQ9UBM1 199 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 IGF2-ASQ6U949 168 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 C2CD3Q4AC94 2353 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 COL12A1Q99715 3063 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 ATP5G1P05496 136 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 C5orf38Q86SI9 138 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 C2orf48Q96LS8 159 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 PRO3102Q9H379 93 aa11.2□□□□□ -0.62
LMNA-201ENST00000347559 MAP1AP78559 2803 aaPredicted RBP11.19□□□□□ -0.62
LMNA-201ENST00000347559 CCL21O00585 134 aa11.19□□□□□ -0.62
LMNA-201ENST00000347559 TRACP01848 142 aa11.19□□□□□ -0.62
LMNA-201ENST00000347559 OR13C6PQ8NH95 151 aa11.19□□□□□ -0.62
LMNA-201ENST00000347559 A0A1B0GX51 115 aa11.19□□□□□ -0.62
LMNA-201ENST00000347559 DGAT2L7PQ6IED9 249 aa11.19□□□□□ -0.62
LMNA-201ENST00000347559 SOSTDC1Q6X4U4 206 aa11.18□□□□□ -0.62
LMNA-201ENST00000347559 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.18□□□□□ -0.62
LMNA-201ENST00000347559 LINC00467Q9BRT7 94 aa11.18□□□□□ -0.62
LMNA-201ENST00000347559 CDSNQ15517 529 aa11.18□□□□□ -0.62
LMNA-201ENST00000347559 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
LMNA-201ENST00000347559 ZFHX2Q9C0A1 2572 aaPredicted RBP11.18□□□□□ -0.62
LMNA-201ENST00000347559 ATOX1O00244 68 aa11.18□□□□□ -0.62
LMNA-201ENST00000347559 NDUFA1O15239 70 aa11.18□□□□□ -0.62
LMNA-201ENST00000347559 TIMM17BO60830 172 aa11.18□□□□□ -0.62
LMNA-201ENST00000347559 CXCL5P42830 114 aa11.18□□□□□ -0.62
LMNA-201ENST00000347559 CRYGAP11844 174 aa11.17□□□□□ -0.62
LMNA-201ENST00000347559 SYNJ2BPP57105 145 aa11.17□□□□□ -0.62
LMNA-201ENST00000347559 COX6A2Q02221 97 aa11.17□□□□□ -0.62
LMNA-201ENST00000347559 DSCR8Q96T75 97 aa11.17□□□□□ -0.62
LMNA-201ENST00000347559 CEP295Q9C0D2 2601 aa11.16□□□□□ -0.62
LMNA-201ENST00000347559 A0A087WVE0 104 aa11.16□□□□□ -0.62
LMNA-201ENST00000347559 DEFB123Q8N688 67 aa11.16□□□□□ -0.62
LMNA-201ENST00000347559 DNAL4O96015 105 aa11.16□□□□□ -0.62
LMNA-201ENST00000347559 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
LMNA-201ENST00000347559 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
LMNA-201ENST00000347559 CHCHD7Q9BUK0 85 aa11.16□□□□□ -0.62
LMNA-201ENST00000347559 C22orf24Q9Y442 160 aa11.16□□□□□ -0.62
LMNA-201ENST00000347559 INAFM2P0DMQ5 153 aa11.15□□□□□ -0.62
LMNA-201ENST00000347559 NOTCH3Q9UM47 2321 aa11.15□□□□□ -0.62
LMNA-201ENST00000347559 BLCAPP62952 87 aa11.15□□□□□ -0.62
LMNA-201ENST00000347559 Q6ZSN1 163 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms