RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 NBEAQ8NFP9 2946 aa11.6□□□□□ -0.55
PTPRU-201ENST00000345512 IGLV4-3A0A075B6K6 122 aa11.6□□□□□ -0.55
PTPRU-201ENST00000345512 K7EQG2 157 aa11.6□□□□□ -0.55
PTPRU-201ENST00000345512 MALP21145 153 aa11.6□□□□□ -0.55
PTPRU-201ENST00000345512 TMEM223A0PJW6 202 aa11.6□□□□□ -0.55
PTPRU-201ENST00000345512 MYO18BQ8IUG5 2567 aa11.59□□□□□ -0.55
PTPRU-201ENST00000345512 HTN3P15516 51 aa11.59□□□□□ -0.55
PTPRU-201ENST00000345512 KLLNB2CW77 178 aa11.59□□□□□ -0.55
PTPRU-201ENST00000345512 IGHV3-33P01772 117 aa11.59□□□□□ -0.55
PTPRU-201ENST00000345512 SPATA25Q9BR10 227 aa11.59□□□□□ -0.55
PTPRU-201ENST00000345512 A0A0B4J2C4 111 aa11.58□□□□□ -0.55
PTPRU-201ENST00000345512 A0A1W2PPR1 153 aa11.58□□□□□ -0.55
PTPRU-201ENST00000345512 INAFM2P0DMQ5 153 aa11.58□□□□□ -0.55
PTPRU-201ENST00000345512 TMEM61Q8N0U2 210 aa11.58□□□□□ -0.56
PTPRU-201ENST00000345512 NFE4Q86UQ8 179 aa11.58□□□□□ -0.56
PTPRU-201ENST00000345512 IGIPA6NJ69 53 aa11.58□□□□□ -0.56
PTPRU-201ENST00000345512 CMC4P56277 68 aaPredicted RBP11.57□□□□□ -0.56
PTPRU-201ENST00000345512 NOP10Q9NPE3 64 aaKnown RBP11.57□□□□□ -0.56
PTPRU-201ENST00000345512 DSPP15924 2871 aaKnown RBP11.57□□□□□ -0.56
PTPRU-201ENST00000345512 TEX49A0A1B0GTD5 131 aa11.57□□□□□ -0.56
PTPRU-201ENST00000345512 DNAJC30Q96LL9 226 aa11.57□□□□□ -0.56
PTPRU-201ENST00000345512 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
PTPRU-201ENST00000345512 PROK1P58294 105 aa11.57□□□□□ -0.56
PTPRU-201ENST00000345512 RNF183Q96D59 192 aa11.57□□□□□ -0.56
PTPRU-201ENST00000345512 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
PTPRU-201ENST00000345512 VSIG2Q96IQ7 327 aa11.56□□□□□ -0.56
PTPRU-201ENST00000345512 BAALC-AS2P0C853 105 aa11.56□□□□□ -0.56
PTPRU-201ENST00000345512 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
PTPRU-201ENST00000345512 ABCA2Q9BZC7 2435 aa11.56□□□□□ -0.56
PTPRU-201ENST00000345512 EDN2P20800 178 aa11.56□□□□□ -0.56
PTPRU-201ENST00000345512 OVOL2Q9BRP0 275 aa11.56□□□□□ -0.56
PTPRU-201ENST00000345512 HIST1H4AP62805 103 aaKnown RBP11.55□□□□□ -0.56
PTPRU-201ENST00000345512 CRYGDP07320 174 aa11.55□□□□□ -0.56
PTPRU-201ENST00000345512 UBE2D1P51668 147 aa11.55□□□□□ -0.56
PTPRU-201ENST00000345512 MIAQ16674 131 aa11.55□□□□□ -0.56
PTPRU-201ENST00000345512 C9orf153Q5TBE3 101 aa11.55□□□□□ -0.56
PTPRU-201ENST00000345512 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
PTPRU-201ENST00000345512 FRYLO94915 3013 aa11.55□□□□□ -0.56
PTPRU-201ENST00000345512 REV3LO60673 3130 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 TRAV13-2A0A0B4J235 113 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 H3BT86 120 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 TSHBP01222 138 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 Q96MF0 132 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 MGAQ8IWI9 3026 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 DCANP1Q8TF63 244 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 CDKN2A-AS1Q9UH64 79 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 A8MZ25 164 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 TRIAP1O43715 76 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 XGP55808 180 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 S100A7L2Q5SY68 101 aa11.54□□□□□ -0.56
PTPRU-201ENST00000345512 IGLV4-69A0A075B6H9 119 aa11.53□□□□□ -0.56
PTPRU-201ENST00000345512 TMEM89A2RUT3 159 aa11.53□□□□□ -0.56
PTPRU-201ENST00000345512 NXPH4O95158 308 aa11.52□□□□□ -0.56
PTPRU-201ENST00000345512 TSPEAR-AS2P59090 65 aa11.52□□□□□ -0.56
PTPRU-201ENST00000345512 SS18Q15532 418 aa11.52□□□□□ -0.57
PTPRU-201ENST00000345512 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
PTPRU-201ENST00000345512 LINC00467Q9BRT7 94 aa11.52□□□□□ -0.57
PTPRU-201ENST00000345512 RS1O15537 224 aa11.52□□□□□ -0.57
PTPRU-201ENST00000345512 PRM2P04554 102 aa11.52□□□□□ -0.57
PTPRU-201ENST00000345512 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
PTPRU-201ENST00000345512 C9orf85Q96MD7 179 aa11.51□□□□□ -0.57
PTPRU-201ENST00000345512 LINC01546A6NGU7 62 aa11.51□□□□□ -0.57
PTPRU-201ENST00000345512 C5orf38Q86SI9 138 aa11.5□□□□□ -0.57
PTPRU-201ENST00000345512 HERV-K104P63124 156 aa11.5□□□□□ -0.57
PTPRU-201ENST00000345512 K7EQD1 137 aa11.5□□□□□ -0.57
PTPRU-201ENST00000345512 IGLV1-40P01703 118 aa11.5□□□□□ -0.57
PTPRU-201ENST00000345512 PSMB8P28062 276 aa11.5□□□□□ -0.57
PTPRU-201ENST00000345512 EYSQ5T1H1 3165 aa11.5□□□□□ -0.57
PTPRU-201ENST00000345512 SOCS3O14543 225 aa11.49□□□□□ -0.57
PTPRU-201ENST00000345512 FRYQ5TBA9 3013 aa11.49□□□□□ -0.57
PTPRU-201ENST00000345512 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
PTPRU-201ENST00000345512 POLQO75417 2590 aa11.49□□□□□ -0.57
PTPRU-201ENST00000345512 CCL24O00175 119 aa11.48□□□□□ -0.57
PTPRU-201ENST00000345512 DAZ2Q13117 558 aaKnown RBP11.48□□□□□ -0.57
PTPRU-201ENST00000345512 DAZ4Q86SG3 579 aaKnown RBP11.48□□□□□ -0.57
PTPRU-201ENST00000345512 DAZ3Q9NR90 486 aaKnown RBP11.48□□□□□ -0.57
PTPRU-201ENST00000345512 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
PTPRU-201ENST00000345512 MAP6D1Q9H9H5 199 aa11.48□□□□□ -0.57
PTPRU-201ENST00000345512 TRBV30A0A0K0K1B3 111 aa11.48□□□□□ -0.57
PTPRU-201ENST00000345512 UBE2D3P61077 147 aa11.48□□□□□ -0.57
PTPRU-201ENST00000345512 UBE2D2P62837 147 aa11.48□□□□□ -0.57
PTPRU-201ENST00000345512 A0A096LPF7 62 aa11.47□□□□□ -0.57
PTPRU-201ENST00000345512 ABCA12Q86UK0 2595 aa11.47□□□□□ -0.57
PTPRU-201ENST00000345512 ACYP1P07311 99 aa11.47□□□□□ -0.57
PTPRU-201ENST00000345512 TMEM263Q8WUH6 116 aaKnown RBP11.47□□□□□ -0.57
PTPRU-201ENST00000345512 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
PTPRU-201ENST00000345512 LAMTOR3Q9UHA4 124 aa11.47□□□□□ -0.57
PTPRU-201ENST00000345512 FAM236AA0A1B0GUQ0 79 aa11.46□□□□□ -0.57
PTPRU-201ENST00000345512 FAM236BA0A1B0GV22 79 aa11.46□□□□□ -0.57
PTPRU-201ENST00000345512 XCL1P47992 114 aa11.46□□□□□ -0.57
PTPRU-201ENST00000345512 NDUFV3P56181 108 aaKnown RBP11.46□□□□□ -0.57
PTPRU-201ENST00000345512 C3orf56Q8N813 242 aa11.46□□□□□ -0.57
PTPRU-201ENST00000345512 CRIP2P52943 208 aaPredicted RBP11.45□□□□□ -0.58
PTPRU-201ENST00000345512 AVPP01185 164 aa11.45□□□□□ -0.58
PTPRU-201ENST00000345512 SMIM20Q8N5G0 67 aa11.45□□□□□ -0.58
PTPRU-201ENST00000345512 ZNF580Q9UK33 172 aa11.45□□□□□ -0.58
PTPRU-201ENST00000345512 LRRK2Q5S007 2527 aa11.44□□□□□ -0.58
PTPRU-201ENST00000345512 MIR7-3HGQ8N6C7 128 aa11.44□□□□□ -0.58
PTPRU-201ENST00000345512 COX7B2Q8TF08 81 aa11.44□□□□□ -0.58
PTPRU-201ENST00000345512 HIVEP2P31629 2446 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms