RNA–Protein interactions for RNA: ENST00000345330.8

NPTN-201, Transcript of neuroplastin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPTN, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-201ENST00000345330 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
NPTN-201ENST00000345330 TMEM141Q96I45 108 aa9.91□□□□□ -0.82
NPTN-201ENST00000345330 TNFRSF18Q9Y5U5 241 aa9.91□□□□□ -0.82
NPTN-201ENST00000345330 PF4P02776 101 aa9.91□□□□□ -0.82
NPTN-201ENST00000345330 FXYD2P54710 66 aa9.91□□□□□ -0.82
NPTN-201ENST00000345330 RNASE13Q5GAN3 156 aaKnown RBP9.91□□□□□ -0.82
NPTN-201ENST00000345330 PRADC1Q9BSG0 188 aa9.91□□□□□ -0.82
NPTN-201ENST00000345330 NOP10Q9NPE3 64 aaKnown RBP9.91□□□□□ -0.82
NPTN-201ENST00000345330 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.82
NPTN-201ENST00000345330 CCL25O15444 150 aa9.9□□□□□ -0.82
NPTN-201ENST00000345330 GAGE1Q13065 139 aa9.9□□□□□ -0.82
NPTN-201ENST00000345330 NAA38Q9BRA0 125 aaKnown RBP9.9□□□□□ -0.82
NPTN-201ENST00000345330 CHCHD7Q9BUK0 85 aa9.9□□□□□ -0.82
NPTN-201ENST00000345330 TSPEAR-AS2P59090 65 aa9.89□□□□□ -0.83
NPTN-201ENST00000345330 NBEAL2Q6ZNJ1 2754 aa9.89□□□□□ -0.83
NPTN-201ENST00000345330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
NPTN-201ENST00000345330 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
NPTN-201ENST00000345330 E9PLD3 99 aa9.88□□□□□ -0.83
NPTN-201ENST00000345330 TMEM263Q8WUH6 116 aaKnown RBP9.88□□□□□ -0.83
NPTN-201ENST00000345330 HIGD1BQ9P298 99 aa9.88□□□□□ -0.83
NPTN-201ENST00000345330 GCSHP23434 173 aa9.88□□□□□ -0.83
NPTN-201ENST00000345330 OR4C5Q8NGB2 326 aa9.88□□□□□ -0.83
NPTN-201ENST00000345330 PLEKHB2Q96CS7 222 aa9.88□□□□□ -0.83
NPTN-201ENST00000345330 SEC11AP67812 179 aa9.87□□□□□ -0.83
NPTN-201ENST00000345330 OR11H2Q8NH07 326 aa9.87□□□□□ -0.83
NPTN-201ENST00000345330 FAM110AQ9BQ89 295 aa9.87□□□□□ -0.83
NPTN-201ENST00000345330 MYMXA0A1B0GTQ4 84 aa9.87□□□□□ -0.83
NPTN-201ENST00000345330 RHODO00212 210 aa9.87□□□□□ -0.83
NPTN-201ENST00000345330 ATRQ13535 2644 aa9.87□□□□□ -0.83
NPTN-201ENST00000345330 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
NPTN-201ENST00000345330 K7ERJ3 54 aa9.86□□□□□ -0.83
NPTN-201ENST00000345330 TMEM170BQ5T4T1 132 aa9.86□□□□□ -0.83
NPTN-201ENST00000345330 RAB37Q96AX2 223 aa9.86□□□□□ -0.83
NPTN-201ENST00000345330 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.86□□□□□ -0.83
NPTN-201ENST00000345330 LINC01549A6NIU2 74 aa9.85□□□□□ -0.83
NPTN-201ENST00000345330 AMMECR1LQ6DCA0 310 aa9.85□□□□□ -0.83
NPTN-201ENST00000345330 SLC25A29Q8N8R3 303 aa9.85□□□□□ -0.83
NPTN-201ENST00000345330 IGHV3-64A0A075B6Q5 118 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 GAGE12BA1L429 117 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 CRLF1O75462 422 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 GAGE7O76087 117 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 GAGE12FP0CL80 117 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 GAGE12GP0CL81 117 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 GAGE12IP0CL82 117 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 CMC4P56277 68 aaPredicted RBP9.84□□□□□ -0.83
NPTN-201ENST00000345330 VAMP3Q15836 100 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 UBE2D4Q9Y2X8 147 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 LOC100131303A0A0U1RQF7 123 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 ZNF815PA8K554 130 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 UBE2V1Q13404 147 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 NFE4Q86UQ8 179 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 CEND1Q8N111 149 aa9.84□□□□□ -0.83
NPTN-201ENST00000345330 TRBV7-3A0A075B6L6 115 aa9.83□□□□□ -0.84
NPTN-201ENST00000345330 DAZ2Q13117 558 aaKnown RBP9.83□□□□□ -0.84
NPTN-201ENST00000345330 AMELXQ99217 191 aa9.83□□□□□ -0.84
NPTN-201ENST00000345330 VCX2Q9H322 139 aa9.83□□□□□ -0.84
NPTN-201ENST00000345330 ZNF22P17026 224 aaPredicted RBP9.83□□□□□ -0.84
NPTN-201ENST00000345330 PTTG1IPP53801 180 aa9.83□□□□□ -0.84
NPTN-201ENST00000345330 NTM-AS1Q6ZSK4 140 aa9.83□□□□□ -0.84
NPTN-201ENST00000345330 Q6ZUT4 128 aa9.83□□□□□ -0.84
NPTN-201ENST00000345330 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 A6NDN8 102 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 H3BRM9 83 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 H3BUT2 72 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 K7EQD1 137 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 C16orf74Q96GX8 76 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 TM2D2Q9BX73 214 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 PYGO1Q9Y3Y4 419 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 DNAJC30Q96LL9 226 aa9.82□□□□□ -0.84
NPTN-201ENST00000345330 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 GAGE4Q13068 117 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 GAGE5Q13069 117 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 COTL1Q14019 142 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 RRN3P1Q2M238 152 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 HIST1H4GQ99525 98 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 NHP2Q9NX24 153 aaKnown RBP9.81□□□□□ -0.84
NPTN-201ENST00000345330 TMEM223A0PJW6 202 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 PAPPA-AS1Q5QFB9 102 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 CITED1Q99966 193 aa9.81□□□□□ -0.84
NPTN-201ENST00000345330 C9orf118A6NHY6 69 aa9.8□□□□□ -0.84
NPTN-201ENST00000345330 C1QTNF4Q9BXJ3 329 aa9.8□□□□□ -0.84
NPTN-201ENST00000345330 TRGV2A0A075B6R0 118 aa9.8□□□□□ -0.84
NPTN-201ENST00000345330 OVOL2Q9BRP0 275 aa9.79□□□□□ -0.84
NPTN-201ENST00000345330 FBN1P35555 2871 aaKnown RBP9.79□□□□□ -0.84
NPTN-201ENST00000345330 TRAV8-3A0A0A6YYJ7 113 aa9.78□□□□□ -0.84
NPTN-201ENST00000345330 A0A0J9YY99 117 aa9.78□□□□□ -0.84
NPTN-201ENST00000345330 A8MZ25 164 aa9.78□□□□□ -0.84
NPTN-201ENST00000345330 J3QQQ9 107 aa9.78□□□□□ -0.84
NPTN-201ENST00000345330 UBE2D3P61077 147 aa9.78□□□□□ -0.84
NPTN-201ENST00000345330 HERVK_113P61574 105 aa9.78□□□□□ -0.84
NPTN-201ENST00000345330 UBE2D2P62837 147 aa9.78□□□□□ -0.84
NPTN-201ENST00000345330 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
NPTN-201ENST00000345330 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
NPTN-201ENST00000345330 FOSL1P15407 271 aa9.77□□□□□ -0.84
NPTN-201ENST00000345330 X6R8D5 127 aa9.77□□□□□ -0.84
NPTN-201ENST00000345330 SMIM13P0DJ93 91 aa9.77□□□□□ -0.85
NPTN-201ENST00000345330 RPL36AP83881 106 aaKnown RBP9.77□□□□□ -0.85
NPTN-201ENST00000345330 RPL36ALQ969Q0 106 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms