RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 LINC01620Q4KN68 170 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
SNRNP48-201ENST00000342415 DCHS1Q96JQ0 3298 aa9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 RHODO00212 210 aa9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 SRSF2Q01130 221 aaKnown RBP9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 Q8N6K4 173 aa9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 ASPMQ8IZT6 3477 aa9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 C20orf203Q8NBC4 194 aa9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 HIST1H4AP62805 103 aaKnown RBP9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 RHOHQ15669 191 aa9.33□□□□□ -0.92
SNRNP48-201ENST00000342415 TIMM17AQ99595 171 aa9.32□□□□□ -0.92
SNRNP48-201ENST00000342415 CRYBA4P53673 196 aa9.32□□□□□ -0.92
SNRNP48-201ENST00000342415 A0A0J9YX75 114 aa9.32□□□□□ -0.92
SNRNP48-201ENST00000342415 TEX49A0A1B0GTD5 131 aa9.32□□□□□ -0.92
SNRNP48-201ENST00000342415 IFITM1P13164 125 aa9.32□□□□□ -0.92
SNRNP48-201ENST00000342415 DSCR9P59020 149 aa9.32□□□□□ -0.92
SNRNP48-201ENST00000342415 LINC01619G3V211 115 aa9.31□□□□□ -0.92
SNRNP48-201ENST00000342415 C10orf105Q8TEF2 133 aa9.31□□□□□ -0.92
SNRNP48-201ENST00000342415 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
SNRNP48-201ENST00000342415 C11orf71Q6IPW1 123 aa9.31□□□□□ -0.92
SNRNP48-201ENST00000342415 Q6ZUT4 128 aa9.31□□□□□ -0.92
SNRNP48-201ENST00000342415 TMEM61Q8N0U2 210 aa9.31□□□□□ -0.92
SNRNP48-201ENST00000342415 CNFNQ9BYD5 112 aa9.31□□□□□ -0.92
SNRNP48-201ENST00000342415 EDA2RQ9HAV5 297 aa9.31□□□□□ -0.92
SNRNP48-201ENST00000342415 MALP21145 153 aa9.3□□□□□ -0.92
SNRNP48-201ENST00000342415 RNF183Q96D59 192 aa9.3□□□□□ -0.92
SNRNP48-201ENST00000342415 RBMY1BA6NDE4 496 aaKnown RBP9.3□□□□□ -0.92
SNRNP48-201ENST00000342415 RBMY1EA6NEQ0 496 aaKnown RBP9.3□□□□□ -0.92
SNRNP48-201ENST00000342415 RBMY1DP0C7P1 496 aaKnown RBP9.3□□□□□ -0.92
SNRNP48-201ENST00000342415 RBMY1A1P0DJD3 496 aaKnown RBP9.3□□□□□ -0.92
SNRNP48-201ENST00000342415 RBMY1CP0DJD4 496 aa9.3□□□□□ -0.92
SNRNP48-201ENST00000342415 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
SNRNP48-201ENST00000342415 C5orf38Q86SI9 138 aa9.29□□□□□ -0.92
SNRNP48-201ENST00000342415 SLC25A29Q8N8R3 303 aa9.29□□□□□ -0.92
SNRNP48-201ENST00000342415 ICOSQ9Y6W8 199 aa9.29□□□□□ -0.92
SNRNP48-201ENST00000342415 CFAP161Q6P656 301 aa9.29□□□□□ -0.92
SNRNP48-201ENST00000342415 H3BUA1 57 aa9.29□□□□□ -0.92
SNRNP48-201ENST00000342415 TINCRA0A1B0GVN0 87 aa9.28□□□□□ -0.92
SNRNP48-201ENST00000342415 ZNF22P17026 224 aaPredicted RBP9.28□□□□□ -0.92
SNRNP48-201ENST00000342415 A0A0J9YXY3 114 aa9.28□□□□□ -0.92
SNRNP48-201ENST00000342415 ZNF580Q9UK33 172 aa9.28□□□□□ -0.92
SNRNP48-201ENST00000342415 MUC3AQ02505 3323 aa9.28□□□□□ -0.92
SNRNP48-201ENST00000342415 VPREB3Q9UKI3 123 aa9.27□□□□□ -0.92
SNRNP48-201ENST00000342415 USP24Q9UPU5 2620 aa9.27□□□□□ -0.92
SNRNP48-201ENST00000342415 A6NDX4 124 aa9.27□□□□□ -0.93
SNRNP48-201ENST00000342415 ELANEP08246 267 aa9.27□□□□□ -0.93
SNRNP48-201ENST00000342415 GPHB5Q86YW7 130 aa9.27□□□□□ -0.93
SNRNP48-201ENST00000342415 TMEM86BQ8N661 226 aa9.27□□□□□ -0.93
SNRNP48-201ENST00000342415 CDKN2A-AS1Q9UH64 79 aa9.27□□□□□ -0.93
SNRNP48-201ENST00000342415 M0QY20 66 aa9.27□□□□□ -0.93
SNRNP48-201ENST00000342415 LRBAP50851 2863 aa9.26□□□□□ -0.93
SNRNP48-201ENST00000342415 IGLV4-3A0A075B6K6 122 aa9.26□□□□□ -0.93
SNRNP48-201ENST00000342415 XGP55808 180 aa9.26□□□□□ -0.93
SNRNP48-201ENST00000342415 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
SNRNP48-201ENST00000342415 TMEM243Q9BU79 118 aa9.26□□□□□ -0.93
SNRNP48-201ENST00000342415 ESM1Q9NQ30 184 aa9.26□□□□□ -0.93
SNRNP48-201ENST00000342415 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 BAALC-AS2P0C853 105 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 CFAP126Q5VTH2 177 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 S100A7L2Q5SY68 101 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 C9orf153Q5TBE3 101 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 Q6ZSV7 163 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 SMIM20Q8N5G0 67 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 K7EMT4 169 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 MED14OSP0DP75 135 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 GATA3P23771 443 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 XCL1P47992 114 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 PIFOQ8TCI5 191 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 ZMAT4Q9H898 229 aa9.25□□□□□ -0.93
SNRNP48-201ENST00000342415 POLR2KP53803 58 aaKnown RBP9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 HERVK_113P63121 156 aa9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 HECTD1Q9ULT8 2610 aa9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 IGHV3-33P01772 117 aa9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 CRIP2P52943 208 aaPredicted RBP9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 TRIAP1O43715 76 aa9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 Q9HAA7 133 aa9.24□□□□□ -0.93
SNRNP48-201ENST00000342415 AVPP01185 164 aa9.23□□□□□ -0.93
SNRNP48-201ENST00000342415 CLUHP3Q96NS8 147 aa9.23□□□□□ -0.93
SNRNP48-201ENST00000342415 LINC00467Q9BRT7 94 aa9.23□□□□□ -0.93
SNRNP48-201ENST00000342415 LGALS9O00182 355 aa9.23□□□□□ -0.93
SNRNP48-201ENST00000342415 K7EQG2 157 aa9.23□□□□□ -0.93
SNRNP48-201ENST00000342415 SPANXA1Q9NS26 97 aa9.23□□□□□ -0.93
SNRNP48-201ENST00000342415 VSIG2Q96IQ7 327 aa9.22□□□□□ -0.93
SNRNP48-201ENST00000342415 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
SNRNP48-201ENST00000342415 TRBV10-2A0A0K0K1G8 114 aa9.22□□□□□ -0.93
SNRNP48-201ENST00000342415 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
SNRNP48-201ENST00000342415 CRYGDP07320 174 aa9.22□□□□□ -0.93
SNRNP48-201ENST00000342415 C18orf65Q6ZTR6 163 aa9.22□□□□□ -0.93
SNRNP48-201ENST00000342415 LAMTOR3Q9UHA4 124 aa9.22□□□□□ -0.93
SNRNP48-201ENST00000342415 IGLV10-54A0A075B6I4 117 aa9.21□□□□□ -0.93
SNRNP48-201ENST00000342415 IGIPA6NJ69 53 aa9.21□□□□□ -0.93
SNRNP48-201ENST00000342415 IGHV4-4A0A075B6R2 117 aa9.21□□□□□ -0.93
SNRNP48-201ENST00000342415 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
SNRNP48-201ENST00000342415 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms